LOCUS AEG51991.1 2504 aa PRT BCT 08-JUN-2015 DEFINITION Sinorhizobium meliloti AK83 Polyketide synthase protein. ACCESSION CP002781-216 PROTEIN_ID AEG51991.1 SOURCE Sinorhizobium meliloti AK83 (Ensifer meliloti AK83) ORGANISM Sinorhizobium meliloti AK83 Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium. REFERENCE 1 (bases 1 to 3820344) AUTHORS Galardini,M., Pini,F., Bazzicalupo,M., Biondi,E.G. and Mengoni,A. TITLE Replicon-dependent bacterial genome evolution: the case of Sinorhizobium meliloti JOURNAL Genome Biol Evol 5 (3), 542-558 (2013) PUBMED 23431003 REFERENCE 2 (bases 1 to 3820344) AUTHORS Lucas,S., Copeland,A., Lapidus,A., Cheng,J.-F., Goodwin,L., Pitluck,S., Teshima,H., Detter,J.C., Han,C., Tapia,R., Land,M., Hauser,L., Kyrpides,N., Ivanova,N., Ovchinnikova,G., Pagani,I., Brilli,M., Bazzicalupo,M., Mengoni,A., Biondi,E.G. and Woyke,T. CONSRTM US DOE Joint Genome Institute TITLE Complete sequence of chromosome1 of Sinorhizobium meliloti AK83 JOURNAL Unpublished REFERENCE 3 (bases 1 to 3820344) AUTHORS Lucas,S., Copeland,A., Lapidus,A., Cheng,J.-F., Goodwin,L., Pitluck,S., Teshima,H., Detter,J.C., Han,C., Tapia,R., Land,M., Hauser,L., Kyrpides,N., Ivanova,N., Ovchinnikova,G., Pagani,I., Brilli,M., Bazzicalupo,M., Mengoni,A., Biondi,E.G. and Woyke,T. CONSRTM US DOE Joint Genome Institute TITLE Direct Submission JOURNAL Submitted (16-MAY-2011) US DOE Joint Genome Institute, 2800 Mitchell Drive B310, Walnut Creek, CA 94598-1698, USA COMMENT URL -- http://www.jgi.doe.gov JGI Project ID: 4086303 Source DNA and organism available from Emanuele G. Biondi (emanuele.biondi@unifi.it) Contacts: Emanuele G. Biondi (emanuele.biondi@unifi.it) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Sinorhizobium meliloti AK83 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Host, Plant root, Root nodule, Soil num_replicons :: 5 ref_biomaterial :: Missing biotic_relationship :: Symbiotic trophic_level :: Missing rel_to_oxygen :: Aerobe isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi05780 Current Finishing Status :: Finished Funding Program :: DOE-CSP 2009 Source of Isolate :: Biondi, Emanuele (Universita di Firenze) Cell Shape :: Rod-shaped Motility :: Motile Sporulation :: Nonsporulating Temperature Range :: Mesophile Temperature Optimum :: 25 - 30C Gram Staining :: Gram- Symbiotic Relationship :: Mutualistic Diseases :: None Phenotypes :: Nitrogen cycle, Streptomycin resistant, Symbiotic ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## FEATURES Qualifiers source /organism="Sinorhizobium meliloti AK83" /mol_type="genomic DNA" /strain="AK83" /db_xref="taxon:693982" /chromosome="1" /collected_by="Emmanuele Biondi" protein /locus_tag="Sinme_0220" /EC_number="1.6.5.5" /EC_number="2.3.1.94" /inference="protein motif:PRIAM:2.3.1.94, 1.6.5.5" /note="PFAM: Beta-ketoacyl synthase, N-terminal; Polyketide synthase, KR; Beta-ketoacyl synthase, C-terminal; Alcohol dehydrogenase, C-terminal; Phosphopantetheine-binding; Acyl transferase; Alcohol dehydrogenase GroES-like; KEGG: smd:Smed_0197 beta-ketoacyl synthase; SMART: Polyketide synthase, enoylreductase; Polyketide synthase, acyl transferase domain; Polyketide synthase, dehydratase domain; Polyketide synthase/Fatty acid synthase, KR" /transl_table=11 /db_xref="InterPro:IPR006163" /db_xref="InterPro:IPR013149" /db_xref="InterPro:IPR013154" /db_xref="InterPro:IPR013968" /db_xref="InterPro:IPR014030" /db_xref="InterPro:IPR014031" /db_xref="InterPro:IPR014043" /db_xref="InterPro:IPR020801" /db_xref="InterPro:IPR020807" /db_xref="InterPro:IPR020842" /db_xref="InterPro:IPR020843" BEGIN 1 MTVEIIGRAC LAPGAKSPQA LFKILRQGKC TVTRVPSDRW DLARFWHPVM GTPGKTYSFA 61 AGVLDHIYDF DPAVFGMSQR EAMYMDPQQR VLLQLAWRAL EDANISVASL HGENVGVYVG 121 ASSLDHANLT VDDPAAAGPY FMTGNTLSIV SNRISHVFGL SGPSMTVDTA CSSSLVALDQ 181 AMRALNAGEI DTAIVGGVNI LAHPLPFVGF AQARMLSPEG LCRAYDNDGA GYVRAEGGVV 241 FVLRRTDRAQ RERDRSYARI VASGVNSAGR TNGISLPSRE AQANLLRMIY EGNGIDANQV 301 AFVEGHGTGT KVGDPAEVWS IGTVIGAKRR APVPIGSIKS NIGHTEPASG LFGMMKAVLA 361 LENNYLPASL HFETPNEQID FDGLNVRVTA NPIELLKGKR ARLAGINSFG FGGANAHVVI 421 SDPDPAQAEK AATSPAGHVF LASAHTASSL ENLLRDYKAA FAGATKEETR AIVAASGANR 481 THMRHRFAAR SDHPEDIVRA IANHLEKPGS DIGETGEAAA KEAKVAFVFS GNGSQWAGMG 541 VEAFRENLHF RQSFTSVSAL FRFHSDIVLT DLLTDPELDR KLADTKVAQP LLFAIQAALS 601 DSLVAMGIKP TAVFGHSVGE IAAAYAAGAL SLVDAVSIVA KRSLHQDLLA GQGTMAAVML 661 GEEAAKAFAA ERGLDDVCVA AINAHNSVTI SGPANEISAF RDAARKAKIP VQILDINYPF 721 HHPIIDRAKE AFLSDIPDIA PRRTELAYLS TVTGAALDGT ALDPDYWWKN VREPVRFQAA 781 AEAALDLGCM LFIEISPRPI LGSYVKETIK QAAVPASVVA TLLRDAGANG HDPISASMAR 841 AVAHGAAVDR SRVYGKRDAF IELPALPFEP VELRPAATTD ATDLFGRSAK PYRLNGWRGD 901 PNAGSWKNHV DAHLFPDLAE HVVDGKAILP GSGFIEIAVS AAQQYHGSDE VEITNLEIVR 961 PLELSDSRIM ELSTILSPET GDIEIRSRER LSEDDWTVHA VARSRKPLPT TSNDCPSTKG 1021 LAKTATVTAA KAYETAKQFG LDYGPQFQLL SKAVAYGDRL IDVELKHPRA SGHPHVTYAL 1081 HPISVDATFH GLVALFDRFT GDRGGAPYIP VRFGSVRVVN AGRPIARATI EIERVSANSI 1141 KARFHFFDET GVAIAHFEDC RFRRTYLRKH KTLEGLSFHY EAVLSDVVMP GTKVATAMPA 1201 TLAEPIDDNG VDNATLLFNA AIYRACQEIA LKLGRGTATV RGDALPGDFA FQCFLTSCLL 1261 TLEDAGLCEH QNGNWKVARE FSLPTVPEIL GELYGDRPDR AVEAVLVNNA YAEALSRLDA 1321 LLGPVRAGDD AVSFNAGFIS EATLDHQAVH SVASRSRMDQ VLHTVEHVLA AQPAGARLRL 1381 IELGSVSAGF SRRLADLAAR NGAALSIFEP RDNAQRNLEI AFEEDAHVRV LKKSEFADIG 1441 PFDLAVSASD NLYQVIEEES GVRTALRSMP PGSGLVAAVS APSIFADFAL GLSGGWFERS 1501 QTAEFPIGRI AAVPHWQKCL ADLDLGDVVV TDRECPHGNT ILIEARGTAA AGAGAEPGET 1561 TTPYLLIETA TAQKPVAAGG RSAAPVRVTG DLAADMATLR AALEAMGDRP VRAVFMSEAE 1621 RAVGDGSALL QTRVLALSAF AEALKQHLAG VEPEGDDRPR LVLVAPGGAP LSASAGSGLN 1681 SGLWAFARVL QNEYEFIDVH TLDLAGDADI GRKDMLAAAL PLLTVSGQNR EWLLDRKTGL 1741 LSELRAVPGA TNKADGKTNA FAAATIRQRV SSQVASIAWE EASVPEPGPN EVVVAVAATG 1801 LNFRDVMWAM GLLPEEALED GFAGATIGME LSGHVVAVGE EIDDLAVGDA VMAIASAAFS 1861 THAVVARAGI AKLPRALSPV AAATLPVAFL TAYYAIVELG RIQAGETILI HGAAGGVGLA 1921 ALQVAKLKGA KVIATAGTRE KRRFLTMLGA DHVFDSRSLG FVEDVRSVTG GEGVDLVLNS 1981 LFAEAMEQSL SLVKPFGRFL ELGKRDYYAD SKIGLRPFRR NVSYFGIDAD QLLVNAPDLT 2041 RRIFMEIGAL FEEGKLTPLP YRAFDYDEIG NAFRLMQNAG HIGKIVVLPP VAGRHEVTAK 2101 AVRGMKVDPD GVHLVVGGIG GFGLVAANWL VEKGARRIAL CSRRGQPDAE TRAMIERWQN 2161 GGVAASVHAC DITDAAAVET LLATLRSEAP LRSVVHAAMV LDDALIGNLS RERNRPVIET 2221 KAKGAAILDR LTRGDRLDNF ILFSSATTLV GNPGQANYVA ANGYLEGLAR ARRQEGLAGL 2281 AVGFGAIADA GYLTQNADVN DLLAKRIGKT ALKAQVALDM VENHVAADPG TVDAAVVMIS 2341 EIDWTAARNL PVARNALFEV ILRSADQHAA GAEGTTMDLV AMIEGKSPQE AEDILFDLVA 2401 GEIAAILRVS KDTVTRGKIL KEIGLDSLMA VELGMSFQQN TGFDMPLSGV ADNTTVGDIA 2461 RKLHEKVSKR DQGNENENEA GDDKLVTELT QRHVGADKEK ALSQ //