LOCUS AEG51866.1 2073 aa PRT BCT 08-JUN-2015 DEFINITION Sinorhizobium meliloti AK83 conserved repeat domain protein protein. ACCESSION CP002781-91 PROTEIN_ID AEG51866.1 SOURCE Sinorhizobium meliloti AK83 (Ensifer meliloti AK83) ORGANISM Sinorhizobium meliloti AK83 Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium. REFERENCE 1 (bases 1 to 3820344) AUTHORS Galardini,M., Pini,F., Bazzicalupo,M., Biondi,E.G. and Mengoni,A. TITLE Replicon-dependent bacterial genome evolution: the case of Sinorhizobium meliloti JOURNAL Genome Biol Evol 5 (3), 542-558 (2013) PUBMED 23431003 REFERENCE 2 (bases 1 to 3820344) AUTHORS Lucas,S., Copeland,A., Lapidus,A., Cheng,J.-F., Goodwin,L., Pitluck,S., Teshima,H., Detter,J.C., Han,C., Tapia,R., Land,M., Hauser,L., Kyrpides,N., Ivanova,N., Ovchinnikova,G., Pagani,I., Brilli,M., Bazzicalupo,M., Mengoni,A., Biondi,E.G. and Woyke,T. CONSRTM US DOE Joint Genome Institute TITLE Complete sequence of chromosome1 of Sinorhizobium meliloti AK83 JOURNAL Unpublished REFERENCE 3 (bases 1 to 3820344) AUTHORS Lucas,S., Copeland,A., Lapidus,A., Cheng,J.-F., Goodwin,L., Pitluck,S., Teshima,H., Detter,J.C., Han,C., Tapia,R., Land,M., Hauser,L., Kyrpides,N., Ivanova,N., Ovchinnikova,G., Pagani,I., Brilli,M., Bazzicalupo,M., Mengoni,A., Biondi,E.G. and Woyke,T. CONSRTM US DOE Joint Genome Institute TITLE Direct Submission JOURNAL Submitted (16-MAY-2011) US DOE Joint Genome Institute, 2800 Mitchell Drive B310, Walnut Creek, CA 94598-1698, USA COMMENT URL -- http://www.jgi.doe.gov JGI Project ID: 4086303 Source DNA and organism available from Emanuele G. Biondi (emanuele.biondi@unifi.it) Contacts: Emanuele G. Biondi (emanuele.biondi@unifi.it) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Sinorhizobium meliloti AK83 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Host, Plant root, Root nodule, Soil num_replicons :: 5 ref_biomaterial :: Missing biotic_relationship :: Symbiotic trophic_level :: Missing rel_to_oxygen :: Aerobe isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi05780 Current Finishing Status :: Finished Funding Program :: DOE-CSP 2009 Source of Isolate :: Biondi, Emanuele (Universita di Firenze) Cell Shape :: Rod-shaped Motility :: Motile Sporulation :: Nonsporulating Temperature Range :: Mesophile Temperature Optimum :: 25 - 30C Gram Staining :: Gram- Symbiotic Relationship :: Mutualistic Diseases :: None Phenotypes :: Nitrogen cycle, Streptomycin resistant, Symbiotic ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## FEATURES Qualifiers source /organism="Sinorhizobium meliloti AK83" /mol_type="genomic DNA" /strain="AK83" /db_xref="taxon:693982" /chromosome="1" /collected_by="Emmanuele Biondi" protein /locus_tag="Sinme_0093" /inference="protein motif:TFAM:TIGR01451" /note="KEGG: mes:Meso_1515 hypothetical protein; TIGRFAM: Domain of unknown function DUF11; PFAM: Domain of unknown function DUF11" /transl_table=11 /db_xref="InterPro:IPR001434" BEGIN 1 MRGIRGIVGR VMACLAAFAA LCPAVALAVP APAGALIESQ AVVSYFNTEL GIYESVSTNV 61 VVTRVNSVKA IEVVSDQTVF MAPASVGQFA FFIRNTGNAP LSPSATLEQV AGHHANLVDI 121 RAVIDQNRNG TADPGEWELT PDMAIELPVG GELPVIVQFA TPASSHDGQL AALRLSAKDG 181 SVADAATGTV IMSSTGLVLE KSATENEVQA GGRLRYGLRL RNNGANAVAA YAHLDGSSIL 241 IDGAAASGIL VRDARPLNTR VVNAESAAGF VGLYHVAGQP THTYVTTLPQ DPSAVDAVAF 301 FRAGDYPGGF SANLAFEVAV AGNAQEGFIL NEASTWQQSG EDLVEVRSNL VRTPVEGGEA 361 ALTYAAPDGR PISTAALNSN VRLHLSAAAC NTTPGADSVR IRIATDPEAD LETAVATETG 421 PNTGLFTTAL IPIQRVLPVV QGDSVVSGDR NTKVSASATC GGQTVSAILT VNPGGFVFHS 481 ASNVAIPGAT VILYDASGAE IERIVSDADG FYVVSAAQNA GAYRIDVLPP EGFSFPSERK 541 VFPALGRNVD AEASYGAAFT TTGAFSGIDI PLDPDASSVL RLEKSVDEAN PAPGDILVYS 601 LTLTNTTGIG LVSAAIRDGL PKGISYLEGT ARLDGKPVEV SGFPGRNLTF DLGFVGPDDT 661 VALTYMAAVD PTAQGRLANV ALASGNLAGR GEVVSNEARA LVRIQRDGGV FSDEGVVLGK 721 VYADLNGNGQ QDRYLAAGRN AADGALERVE PGVPGVKLQF SNGASVVTDI DGKYSLPGLP 781 PGSHVIAVST PTLPATVKLR STTARDALSP QSRYLRLLPG QVVSEYFAVS PREGVSRKEV 841 LAELESRRQA YAENIAASKT VSVPERLNPG GEEWVDYFGR LSSSRREAAK TTETQIVARE 901 QSEEESAESG KADAPQALAL DRTRDLEAEI RGLSPALGFL DLEADSLVNS DIVSVRIKGP 961 AEGKLGLNLN GEPVSDGQVG QRVVYASGGV QAAEYVAIRL EGGRNRLEAT FSDPFGNVRE 1021 RNEITVLAPG RPARIEIVAP PAAFADPASA IPVLIRFVDA DGVPTHASMD VTLETSGRGR 1081 WGAEDIRATE PGVQVFVDKG EALVDYYPPA LSGTHKIAVR NGLGRYEAEV KLLADDSKRI 1141 VAGVVEGVVR LPGSVEPATG LEGFDGVTTG VGGELYLQGK IKGDVLLTLR YDSDLDTEER 1201 LFRDIDPERY YPVYGDASER GYDAQSRSRL YVKVEKGLNY VLYGDIDIAP QASEFQLGSQ 1261 NRLLTGAQAH VETGPVTIDL FAGRTDQNQV IREFRAEGLS GPYDLDLSAY AEGSERVEVV 1321 TRDRRQPSRV IDTVLLKRFD DYRLDYFGNS IIFNAPVPAF DDDGNPNFIR VTYEVEGDGD 1381 AYWVYAGEVR YRVNDRIAVG YREMRSEAGS AFDDRRTVRG GYVSADLGPY GKAEVELAQT 1441 VDKDGEAGRA SRFGYEVKKE RVTVRVDAAR ADESFAEGSS LSPGSAEVNV SADWKVNSRL 1501 GIKTSLLYDQ RLTTGNERFG AELLPSWIVN PELTVSGGMR FVRLVPGDGD VPRSVPSAVL 1561 GADWRPAAIP RFGLKGEIEA DLTDFSHLRA LLEGSYQATE RVKVYAGVDW ATSGSEFLDF 1621 SSAGGATGRM RSGVEYRLSD EVKTFTEMRG GSQTGFAGGV AGDWDLGRWD LPGWIGGKDA 1681 RFYASLERFQ PYDLDQIIGL PFGLDDEANS PQTTLSAGYL APLKDGNARL GLGAELSFRD 1741 GGYTAYSQQY WSERAGEWTW AVENRLAKAD TDTQQRLRDH LRVGAALRPE EESLDGLFLG 1801 GVRVDRNFGS DIATDTAYWS AGGSWALDSD TRVTARQAGQ FQAKTAADVT GETFVLLGQA 1861 GIERDFEIQD ELRLRLGFNG TLFYDALNGR SYTGLGAEIG FVPAKNVLVA AGYNVSNVDA 1921 SSVSDIYAAG PYVRLSITLA VLAALTDHDV VTVSGGGTIT LVKRVRNVTS GSGFAVTSAG 1981 GPGDILEYRI TFTNPSADPV SNVSVYDETP AYTSLAVPPG ATVVATPSGM KCTMVVPAGG 2041 GSNGYTGPLQ WKCTGTMPPG ATGRVAFRAK IAD //