LOCUS AEG51865.1 938 aa PRT BCT 08-JUN-2015 DEFINITION Sinorhizobium meliloti AK83 conserved repeat domain protein protein. ACCESSION CP002781-90 PROTEIN_ID AEG51865.1 SOURCE Sinorhizobium meliloti AK83 (Ensifer meliloti AK83) ORGANISM Sinorhizobium meliloti AK83 Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium. REFERENCE 1 (bases 1 to 3820344) AUTHORS Galardini,M., Pini,F., Bazzicalupo,M., Biondi,E.G. and Mengoni,A. TITLE Replicon-dependent bacterial genome evolution: the case of Sinorhizobium meliloti JOURNAL Genome Biol Evol 5 (3), 542-558 (2013) PUBMED 23431003 REFERENCE 2 (bases 1 to 3820344) AUTHORS Lucas,S., Copeland,A., Lapidus,A., Cheng,J.-F., Goodwin,L., Pitluck,S., Teshima,H., Detter,J.C., Han,C., Tapia,R., Land,M., Hauser,L., Kyrpides,N., Ivanova,N., Ovchinnikova,G., Pagani,I., Brilli,M., Bazzicalupo,M., Mengoni,A., Biondi,E.G. and Woyke,T. CONSRTM US DOE Joint Genome Institute TITLE Complete sequence of chromosome1 of Sinorhizobium meliloti AK83 JOURNAL Unpublished REFERENCE 3 (bases 1 to 3820344) AUTHORS Lucas,S., Copeland,A., Lapidus,A., Cheng,J.-F., Goodwin,L., Pitluck,S., Teshima,H., Detter,J.C., Han,C., Tapia,R., Land,M., Hauser,L., Kyrpides,N., Ivanova,N., Ovchinnikova,G., Pagani,I., Brilli,M., Bazzicalupo,M., Mengoni,A., Biondi,E.G. and Woyke,T. CONSRTM US DOE Joint Genome Institute TITLE Direct Submission JOURNAL Submitted (16-MAY-2011) US DOE Joint Genome Institute, 2800 Mitchell Drive B310, Walnut Creek, CA 94598-1698, USA COMMENT URL -- http://www.jgi.doe.gov JGI Project ID: 4086303 Source DNA and organism available from Emanuele G. Biondi (emanuele.biondi@unifi.it) Contacts: Emanuele G. Biondi (emanuele.biondi@unifi.it) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). ##MIGS-Data-START## investigation_type :: bacteria_archaea project_name :: Sinorhizobium meliloti AK83 collection_date :: Missing lat_lon :: Missing depth :: Missing alt_elev :: Missing country :: Missing environment :: Host, Plant root, Root nodule, Soil num_replicons :: 5 ref_biomaterial :: Missing biotic_relationship :: Symbiotic trophic_level :: Missing rel_to_oxygen :: Aerobe isol_growth_condt :: Missing sequencing_meth :: WGS assembly :: Newbler v. 2.3 (pre-release) finishing_strategy :: Finished GOLD Stamp ID :: Gi05780 Current Finishing Status :: Finished Funding Program :: DOE-CSP 2009 Source of Isolate :: Biondi, Emanuele (Universita di Firenze) Cell Shape :: Rod-shaped Motility :: Motile Sporulation :: Nonsporulating Temperature Range :: Mesophile Temperature Optimum :: 25 - 30C Gram Staining :: Gram- Symbiotic Relationship :: Mutualistic Diseases :: None Phenotypes :: Nitrogen cycle, Streptomycin resistant, Symbiotic ##MIGS-Data-END## ##Genome-Assembly-Data-START## Finishing Goal :: Finished Current Finishing Status :: Finished Assembly Method :: Newbler v. 2.3 Genome Coverage :: 30x Sequencing Technology :: 454/Illumina ##Genome-Assembly-Data-END## FEATURES Qualifiers source /organism="Sinorhizobium meliloti AK83" /mol_type="genomic DNA" /strain="AK83" /db_xref="taxon:693982" /chromosome="1" /collected_by="Emmanuele Biondi" protein /locus_tag="Sinme_0092" /inference="protein motif:TFAM:TIGR01451" /note="KEGG: mes:Meso_1513 hypothetical protein; TIGRFAM: Domain of unknown function DUF11; PFAM: Domain of unknown function DUF11; Alpha-galactosidase, NEW3 domain" /transl_table=11 /db_xref="InterPro:IPR001434" /db_xref="InterPro:IPR018905" BEGIN 1 MRANSSVLEA GYRQTNRWRR KLSAHLLVAS ASIMAFASSA LAAPPAAGTV IGNQAVATFE 61 SGGQTFSVTS NLVQTTINTI AGVQIETDTT KSAVAGGKVL FPHTITNVGN AADRYNLTTT 121 FVSDSGLSFV GIYADGDCDG VPDTLTSIDQ TGSLNAGESA CVVVEVNVAA GATGSPTFKI 181 TAASTLTTAS NFTAGTANQP NQPNDTNTDT VTVTTGAVFE FTKTMSLLDD GDGSGSLTPG 241 DTVRVRFNYS NTGGADAANV IITDVLPTAL TYVADKGQWS DGGTMADAGG AVDHTNGQGH 301 TISYSFGDST VKATLSAVPV GKSGYIEFVG TVATGAAGTI SNTGTIDSDQ TDLQTSNEAR 361 LVINDGQATA VTLADRAADP SYAGRFGGDL PDVNYTDGGL ASSTDDDNAA NDTIAYTEGY 421 LSSSIPVPFD VIITNHSNTT QRFNLSVEPS NSFPAGTFPA GTTFSFTTTE GTPLLDTNSD 481 GRPDIQLGAN SVANFLVHAN LPDGAAREEG SQAWEATMTA SSISNTAVLN KTRLRIASKV 541 GGGTVDLQNA GELAAGLNVA NDNGDPWTTV KTNPGEAAEF TLVVKNNRSV SDSFNLSFSG 601 SNFAPGSMPA GWQVVFRNAD GTVTNTGVIA PGASATFTAV VTPPDTAAPG NTDVYFRAAS 661 ASSAAVVDTK LDEVTVVQVV DLAIRTDQTA QAAPGGVVVM THTLENLGNV AITNGPIGYN 721 PDFPSFAETL RVDANGNGVL DSTDATVTSI ADILTALDKT ELAPGDRVLL FSRVQAPASA 781 VGGLSESARI VVNSTLTAPG EATVEDQNPS NNTVTETVTI VSGNVVVVKE QAVDAKCDGT 841 ADGSFTQAGQ AANPGECIVY RITATNMGTA DATELQIDDA TPAYTTYVGS SGTATTGDTE 901 AELTLQPADG ATGAIRSEHG TVPSGQVARL TFRVRIDQ //