LOCUS AEE86971.1 1965 aa PRT PLN 23-MAR-2023 DEFINITION Arabidopsis thaliana nucleoporin (DUF3414) protein. ACCESSION CP002687-7175 PROTEIN_ID AEE86971.1 SOURCE Arabidopsis thaliana (thale cress) ORGANISM Arabidopsis thaliana Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis. REFERENCE 1 (bases 1 to 18585056) AUTHORS Mayer,K., Schuller,C., Wambutt,R., Murphy,G., Volckaert,G., Pohl,T., Dusterhoft,A., Stiekema,W., Entian,K.D., Terryn,N., Harris,B., Ansorge,W., Brandt,P., Grivell,L., Rieger,M., Weichselgartner,M., de Simone,V., Obermaier,B., Mache,R., Muller,M., Kreis,M., Delseny,M., Puigdomenech,P., Watson,M., Schmidtheini,T., Reichert,B., Portatelle,D., Perez-Alonso,M., Boutry,M., Bancroft,I., Vos,P., Hoheisel,J., Zimmermann,W., Wedler,H., Ridley,P., Langham,S.A., McCullagh,B., Bilham,L., Robben,J., Van der Schueren,J., Grymonprez,B., Chuang,Y.J., Vandenbussche,F., Braeken,M., Weltjens,I., Voet,M., Bastiaens,I., Aert,R., Defoor,E., Weitzenegger,T., Bothe,G., Ramsperger,U., Hilbert,H., Braun,M., Holzer,E., Brandt,A., Peters,S., van Staveren,M., Dirske,W., Mooijman,P., Klein Lankhorst,R., Rose,M., Hauf,J., Kotter,P., Berneiser,S., Hempel,S., Feldpausch,M., Lamberth,S., Van den Daele,H., De Keyser,A., Buysshaert,C., Gielen,J., Villarroel,R., De Clercq,R., Van Montagu,M., Rogers,J., Cronin,A., Quail,M., Bray-Allen,S., Clark,L., Doggett,J., Hall,S., Kay,M., Lennard,N., McLay,K., Mayes,R., Pettett,A., Rajandream,M.A., Lyne,M., Benes,V., Rechmann,S., Borkova,D., Blocker,H., Scharfe,M., Grimm,M., Lohnert,T.H., Dose,S., de Haan,M., Maarse,A., Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Fartmann,B., Granderath,K., Dauner,D., Herzl,A., Neumann,S., Argiriou,A., Vitale,D., Liguori,R., Piravandi,E., Massenet,O., Quigley,F., Clabauld,G., Mundlein,A., Felber,R., Schnabl,S., Hiller,R., Schmidt,W., Lecharny,A., Aubourg,S., Chefdor,F., Cooke,R., Berger,C., Montfort,A., Casacuberta,E., Gibbons,T., Weber,N., Vandenbol,M., Bargues,M., Terol,J., Torres,A., Perez-Perez,A., Purnelle,B., Bent,E., Johnson,S., Tacon,D., Jesse,T., Heijnen,L., Schwarz,S., Scholler,P., Heber,S., Francs,P., Bielke,C., Frishman,D., Haase,D., Lemcke,K., Mewes,H.W., Stocker,S., Zaccaria,P., Bevan,M., Wilson,R.K., de la Bastide,M., Habermann,K., Parnell,L., Dedhia,N., Gnoj,L., Schutz,K., Huang,E., Spiegel,L., Sehkon,M., Murray,J., Sheet,P., Cordes,M., Abu-Threideh,J., Stoneking,T., Kalicki,J., Graves,T., Harmon,G., Edwards,J., Latreille,P., Courtney,L., Cloud,J., Abbott,A., Scott,K., Johnson,D., Minx,P., Bentley,D., Fulton,B., Miller,N., Greco,T., Kemp,K., Kramer,J., Fulton,L., Mardis,E., Dante,M., Pepin,K., Hillier,L., Nelson,J., Spieth,J., Ryan,E., Andrews,S., Geisel,C., Layman,D., Du,H., Ali,J., Berghoff,A., Jones,K., Drone,K., Cotton,M., Joshu,C., Antonoiu,B., Zidanic,M., Strong,C., Sun,H., Lamar,B., Yordan,C., Ma,P., Zhong,J., Preston,R., Vil,D., Shekher,M., Matero,A., Shah,R., Swaby,I.K., O'Shaughnessy,A., Rodriguez,M., Hoffmann,J., Till,S., Granat,S., Shohdy,N., Hasegawa,A., Hameed,A., Lodhi,M., Johnson,A., Chen,E., Marra,M., Martienssen,R. and McCombie,W.R. TITLE Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana JOURNAL Nature 402 (6763), 769-777 (1999) PUBMED 10617198 REFERENCE 2 (bases 1 to 18585056) AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E. CONSRTM TAIR TITLE Direct Submission JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie Institution, 260 Panama Street, Stanford, CA, USA REFERENCE 3 (bases 1 to 18585056) AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M., Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R., Vaughn,M. and Town,C.D. TITLE Direct Submission JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute, 9704 Medical Center Dr, Rockville, MD 20850, USA REMARK Protein update by submitter FEATURES Qualifiers source /organism="Arabidopsis thaliana" /mol_type="genomic DNA" /db_xref="taxon:3702" /chromosome="4" /ecotype="Columbia" protein /locus_tag="AT4G38760" /gene_synonym="T9A14.40" /gene_synonym="T9A14_40" /inference="Similar to RNA sequence, EST:INSD:EL985687.1,INSD:ES022272.1,INSD:EG448929.1, INSD:EG448400.1,INSD:EG448402.1,INSD:EG448401.1" /note="Protein of unknown function (DUF3414); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3414 (InterPro:IPR021827); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G10845.1); Has 113 Blast hits to 108 proteins in 52 species: Archae - 0; Bacteria - 2; Metazoa - 61; Fungi - 10; Plants - 37; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink)." /db_xref="TAIR:AT4G38760" /db_xref="Araport:AT4G38760" intron_pos 37:0 (1/31) intron_pos 95:0 (2/31) intron_pos 131:0 (3/31) intron_pos 154:1 (4/31) intron_pos 196:0 (5/31) intron_pos 243:0 (6/31) intron_pos 295:2 (7/31) intron_pos 352:0 (8/31) intron_pos 385:0 (9/31) intron_pos 411:0 (10/31) intron_pos 431:0 (11/31) intron_pos 483:2 (12/31) intron_pos 551:0 (13/31) intron_pos 591:0 (14/31) intron_pos 619:2 (15/31) intron_pos 654:2 (16/31) intron_pos 687:2 (17/31) intron_pos 717:1 (18/31) intron_pos 767:0 (19/31) intron_pos 815:0 (20/31) intron_pos 851:0 (21/31) intron_pos 888:0 (22/31) intron_pos 924:0 (23/31) intron_pos 961:0 (24/31) intron_pos 1015:2 (25/31) intron_pos 1173:0 (26/31) intron_pos 1209:0 (27/31) intron_pos 1228:2 (28/31) intron_pos 1356:0 (29/31) intron_pos 1870:0 (30/31) intron_pos 1939:1 (31/31) BEGIN 1 MANPNSVDSS LWWDPFDSLL TDLENASLSD DLPQPIAKKL EENHAWFVGT LSMFKPPSEK 61 SKEALNSDLV KIKEHQLVIK PQLKDKALRI SSHLNLDEIQ SYILVERSME QEYGTTDSVA 121 QELTQEFIDM ILLQYYIQRQ CLLKCTKRIL IHALYAPREE SSIKEEAVKL ISDGLERRQS 181 SVLEDLLSSC FPKNMDVNLF TLWAEETLIE DNLILDILFL IYNESYCSCN GERWRKLCSF 241 YKGILSGSYN FSKLAVSVEA QHSACRVQIQ LLMILIETLD MENLLQMVHD GVPFRSGTCV 301 FSIVDVQEMD ATISSLNTSE VNEAGPLVLA WAVFLCLISS LPGKEESPFL MDIDHVSYVH 361 QAFEAASLSY FLEILQSNLL NDFDGPISGH RSVVRTFISA FIASYEINLQ LEDGTLELIL 421 DILSKVYQGE ESLCCQFWDR KSFVDGPIRC LLFDLESEFP FRSAEFIRLL SSLSEGSWPA 481 ECVYNFLDKS VGVSTLFDIT SDSPADDASQ LVETSRPLHI PGLEGLVIPS NTRGRILRVI 541 SENTVLVRWE YSLSGIIVLI IRLANKLYIG NNREAFVTLE LLRRMVTFNK AVCFSLLNIS 601 HFFYVQESYV NGKMESDVRV VDIICNSVRS LTFDSGGAAV MAMAIDILAK LLRCSPSSVA 661 PMVLKSNIFD MTSCSDVPDS GYNISLSGSW SLSGKLAKMI LIDCEKNDTS CPLVISVLEF 721 TMQLVEGGLE NDVVFALVVF SLQYILASHE YWKYNHGNMR WKVTLKVIEL MKTCLRFSKF 781 STKLRDVLLD ILLNDASVHS ALFRIICTTT QNLENLCSSR FIEPAEIEGW QLAIVSVLDV 841 LNVILSQFSE STHSGLPVFH QAMLSSTTKP ISVVAAITSL ISYFRNPTIQ VCAAQVLSKL 901 FALAESSQLY IISNAGFGLD NKQITDLRNS VTQIVLDLSG QNEHLVVATL KLLTVAARFQ 961 PALLVAIFDS DEDSDSSNVK QSRKDASSIP DWACKSRLLH TILQYVERAT DFVDRHTDIL 1021 LGLLDFLKTL WQEAGQYANM LEPFKASKKL WQEFSDIISQ ASKIKDSTVG SLGKEEISKL 1081 LVKYQCQASV LEIMACNMFL YKKLLFAESL KKPCVETKKT ASNGVSPPKL TWTADSDPKD 1141 IFSKWCDISV LDGIIQSVSS LDGESEINFQ AKVAAVLLIV HLIVKLETSG AGALSMVLVE 1201 KIKLISETLC AQPAFSELLA QYSKLGYSGG KELMPMIFSD LYCHLQGKLE GRDIPTGPFK 1261 ELFQFLVETS FWEKYKQKTN KDVNMALGDC LFDTQQIQTE LGIDIWDFSE WKTSKTTAEE 1321 MLNYMQRANS MVLLSTSQLS VLHALISVLI LYEDNSLEES AAAERKIPSR VTLLSIDKVC 1381 RKFCTTVDSL ASLWDAPKIV FDILTAQADL LSRLLKSAKK NLSLSVCALV LRNVGPGLKI 1441 LGSLRHSNAI LKKTINLLLE VLLLVVGFGS DNSNSSGMGH MVLAKDFAEI SDATIGLLPL 1501 LCNFMGNPEY LTLCLTTVDL ILRNFLTPET WFPIIQSQLR LQHVILQLQD KKSTTSVSAI 1561 LKFFLTIAQV HGGAQMLLNS GFFSTLRALL MEFPDGMSTL VSDNEKGSLL EKTEKTQHIW 1621 GIGLAVVTAM VHSLGSVSAG ADIVESVISY FFLEKGYMIS YYLAAPDFPS DDRDKVRLRS 1681 QRTWTSLAYL RVTEHTLLLL CALASHWRSW VKIMKDMDSP LREMTIHLLA FISKGAQRLR 1741 ESQSHISHLL CPPVAKEEFD SCKRPSFINT KHGWFSLAPL VCVGKPKITA VSISTALVVR 1801 GDTTEHPGSV PQSQFSDSVA IQIYRVASLL LKFLCLQAEG VVTRAEEVGY VDIAHFPELP 1861 EPEILHGLQD QATAIVAELC DNYKSKEIPD EVKKLCLMLI QTTEMSLYLE LCVVQVCRIH 1921 PVFGRVDNFS KDLKKLVKAA EVHTYLEPSI DSLKKIAAFL YPGSL //