LOCUS AEE86916.1 1273 aa PRT PLN 23-MAR-2023 DEFINITION Arabidopsis thaliana Patched family protein protein. ACCESSION CP002687-7103 PROTEIN_ID AEE86916.1 SOURCE Arabidopsis thaliana (thale cress) ORGANISM Arabidopsis thaliana Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis. REFERENCE 1 (bases 1 to 18585056) AUTHORS Mayer,K., Schuller,C., Wambutt,R., Murphy,G., Volckaert,G., Pohl,T., Dusterhoft,A., Stiekema,W., Entian,K.D., Terryn,N., Harris,B., Ansorge,W., Brandt,P., Grivell,L., Rieger,M., Weichselgartner,M., de Simone,V., Obermaier,B., Mache,R., Muller,M., Kreis,M., Delseny,M., Puigdomenech,P., Watson,M., Schmidtheini,T., Reichert,B., Portatelle,D., Perez-Alonso,M., Boutry,M., Bancroft,I., Vos,P., Hoheisel,J., Zimmermann,W., Wedler,H., Ridley,P., Langham,S.A., McCullagh,B., Bilham,L., Robben,J., Van der Schueren,J., Grymonprez,B., Chuang,Y.J., Vandenbussche,F., Braeken,M., Weltjens,I., Voet,M., Bastiaens,I., Aert,R., Defoor,E., Weitzenegger,T., Bothe,G., Ramsperger,U., Hilbert,H., Braun,M., Holzer,E., Brandt,A., Peters,S., van Staveren,M., Dirske,W., Mooijman,P., Klein Lankhorst,R., Rose,M., Hauf,J., Kotter,P., Berneiser,S., Hempel,S., Feldpausch,M., Lamberth,S., Van den Daele,H., De Keyser,A., Buysshaert,C., Gielen,J., Villarroel,R., De Clercq,R., Van Montagu,M., Rogers,J., Cronin,A., Quail,M., Bray-Allen,S., Clark,L., Doggett,J., Hall,S., Kay,M., Lennard,N., McLay,K., Mayes,R., Pettett,A., Rajandream,M.A., Lyne,M., Benes,V., Rechmann,S., Borkova,D., Blocker,H., Scharfe,M., Grimm,M., Lohnert,T.H., Dose,S., de Haan,M., Maarse,A., Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Fartmann,B., Granderath,K., Dauner,D., Herzl,A., Neumann,S., Argiriou,A., Vitale,D., Liguori,R., Piravandi,E., Massenet,O., Quigley,F., Clabauld,G., Mundlein,A., Felber,R., Schnabl,S., Hiller,R., Schmidt,W., Lecharny,A., Aubourg,S., Chefdor,F., Cooke,R., Berger,C., Montfort,A., Casacuberta,E., Gibbons,T., Weber,N., Vandenbol,M., Bargues,M., Terol,J., Torres,A., Perez-Perez,A., Purnelle,B., Bent,E., Johnson,S., Tacon,D., Jesse,T., Heijnen,L., Schwarz,S., Scholler,P., Heber,S., Francs,P., Bielke,C., Frishman,D., Haase,D., Lemcke,K., Mewes,H.W., Stocker,S., Zaccaria,P., Bevan,M., Wilson,R.K., de la Bastide,M., Habermann,K., Parnell,L., Dedhia,N., Gnoj,L., Schutz,K., Huang,E., Spiegel,L., Sehkon,M., Murray,J., Sheet,P., Cordes,M., Abu-Threideh,J., Stoneking,T., Kalicki,J., Graves,T., Harmon,G., Edwards,J., Latreille,P., Courtney,L., Cloud,J., Abbott,A., Scott,K., Johnson,D., Minx,P., Bentley,D., Fulton,B., Miller,N., Greco,T., Kemp,K., Kramer,J., Fulton,L., Mardis,E., Dante,M., Pepin,K., Hillier,L., Nelson,J., Spieth,J., Ryan,E., Andrews,S., Geisel,C., Layman,D., Du,H., Ali,J., Berghoff,A., Jones,K., Drone,K., Cotton,M., Joshu,C., Antonoiu,B., Zidanic,M., Strong,C., Sun,H., Lamar,B., Yordan,C., Ma,P., Zhong,J., Preston,R., Vil,D., Shekher,M., Matero,A., Shah,R., Swaby,I.K., O'Shaughnessy,A., Rodriguez,M., Hoffmann,J., Till,S., Granat,S., Shohdy,N., Hasegawa,A., Hameed,A., Lodhi,M., Johnson,A., Chen,E., Marra,M., Martienssen,R. and McCombie,W.R. TITLE Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana JOURNAL Nature 402 (6763), 769-777 (1999) PUBMED 10617198 REFERENCE 2 (bases 1 to 18585056) AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E. CONSRTM TAIR TITLE Direct Submission JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie Institution, 260 Panama Street, Stanford, CA, USA REFERENCE 3 (bases 1 to 18585056) AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M., Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R., Vaughn,M. and Town,C.D. TITLE Direct Submission JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute, 9704 Medical Center Dr, Rockville, MD 20850, USA REMARK Protein update by submitter FEATURES Qualifiers source /organism="Arabidopsis thaliana" /mol_type="genomic DNA" /db_xref="taxon:3702" /chromosome="4" /ecotype="Columbia" protein /locus_tag="AT4G38350" /gene_synonym="F22I13.120" /gene_synonym="F22I13_120" /inference="Similar to RNA sequence, EST:INSD:BX836139.1,INSD:EL021892.1,INSD:ES145805.1, INSD:ES143945.1,INSD:BX840185.1,INSD:EH951016.1, INSD:EL981501.1,INSD:ES089925.1,INSD:ES151218.1, INSD:EL004896.1,INSD:ES068982.1,INSD:EH919057.1, INSD:ES079772.1,INSD:EL077687.1,INSD:EH943858.1, INSD:EH991814.1,INSD:ES165052.1,INSD:ES199199.1" /note="Patched family protein; FUNCTIONS IN: hedgehog receptor activity; LOCATED IN: plasma membrane, vacuole, membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Niemann-Pick C type protein (InterPro:IPR004765), Patched (InterPro:IPR003392), Sterol-sensing 5TM box (InterPro:IPR000731); BEST Arabidopsis thaliana protein match is: Patched family protein (TAIR:AT1G42470.1); Has 3325 Blast hits to 2735 proteins in 472 species: Archae - 80; Bacteria - 454; Metazoa - 1756; Fungi - 181; Plants - 170; Viruses - 0; Other Eukaryotes - 684 (source: NCBI BLink)." /db_xref="TAIR:AT4G38350" /db_xref="Araport:AT4G38350" intron_pos 12:0 (1/38) intron_pos 29:2 (2/38) intron_pos 64:0 (3/38) intron_pos 100:0 (4/38) intron_pos 139:0 (5/38) intron_pos 189:1 (6/38) intron_pos 272:0 (7/38) intron_pos 334:0 (8/38) intron_pos 352:2 (9/38) intron_pos 392:0 (10/38) intron_pos 420:0 (11/38) intron_pos 452:0 (12/38) intron_pos 486:0 (13/38) intron_pos 509:0 (14/38) intron_pos 541:0 (15/38) intron_pos 577:0 (16/38) intron_pos 615:0 (17/38) intron_pos 643:0 (18/38) intron_pos 686:0 (19/38) intron_pos 752:1 (20/38) intron_pos 800:1 (21/38) intron_pos 813:0 (22/38) intron_pos 841:0 (23/38) intron_pos 864:0 (24/38) intron_pos 889:2 (25/38) intron_pos 913:0 (26/38) intron_pos 963:0 (27/38) intron_pos 985:0 (28/38) intron_pos 1033:1 (29/38) intron_pos 1055:0 (30/38) intron_pos 1077:0 (31/38) intron_pos 1108:1 (32/38) intron_pos 1120:2 (33/38) intron_pos 1140:0 (34/38) intron_pos 1177:0 (35/38) intron_pos 1199:2 (36/38) intron_pos 1222:0 (37/38) intron_pos 1245:0 (38/38) BEGIN 1 MAIPTKLLLL QLFTFSLLLT ANLTHSEPSN NRHSKEYCAM YDICGHRSDG KVLNCPYASP 61 SIQPDELFSA KIQSLCPTIS GNVCCTETQF DTLRSQVQQA VPFLVGCPAC LRNFLNLFCE 121 LSCSPNQSLF INVTSVAEVS GNLTVDGIDY HITDTFGEGL YESCKEVKFG TMNTRAINFV 181 GGGAKNFREW FTFIGQKAPS GFPGSPYAIN FKSSIPESSA MVPMNVSVYS CGDTSLGCSC 241 GDCPSSPACS SPEPLPPHDE DSCSIRIGPL KVRCIELSMA LVYVLLVSCF FGWAGLNRRR 301 NTTQPLDSSK PLLHPVEEDG INSEMKENIL GVKVQRHAQL SPVQRYMAKF YRSYGSWIAR 361 NPSLVLFMSV AIVLALCSGL YNFKVETRPE KLWVGPESKA AEEKKFFDTH LSPFYRIEQL 421 ILATVPDPKS GRAPSIVTDE NILLLFDIQQ KVDQIRGNYS GSEVSLPDIC LKPLGEDCAT 481 QSILQYFKMD SGTFDDYGGV EHAEYCFQHY TSSETCLSAF QAPVDPSAVL GGFSGNNYSE 541 ATAFVVTYPV NNVIGDSSNE NARAVAWEKS FIQLAKEELL PMVRSKNLSL SFSSESSIEE 601 ELKRESTADV ITIAASYLVM FVYISVTLGD APQFYTFYIS SKVLLGLSGV VLVLLSVLGS 661 VGVFSALGVK STLIIMEVIP FLVLAVGVDN MCILVHAVKR QPREVSLEQR ISSALVEVGP 721 SITLASLSEV LAFAVGAFVP MPACRIFSMF AALAIMLDFF LQITAFVALI VFDCKRSADN 781 RIDCFPCIKV PSSSRESVEG GREPGFLERY MKEVHAPVLG LWGVKMVVVA VFFAFALASI 841 AISPRLETGL EQKIVLPRDS YLQDYFDSLS EYLRVGPPLY FVVKNYNYSS ESRHTNQLCS 901 ISQCNSNSLL NEISRASQAS DTSYIAKPAA SWLDDFLVWL SPEAFGCCRK FTNGSYCPPD 961 DQPPCCTAEE DICSLDGICK DCTTCFRHSD LVQDRPSTAQ FREKLPWFLN ALPSADCAKG 1021 GHGAYTNSVD LKGYESGVIQ ASEFRTYHTP LNTQGDYVNA LRAAREFSSR ISNSLKIDIF 1081 PYSVFYIFFE QYLNIWTVAL TNLAIAIGAI FIVCWLITSS AWSSAIIVLV LVMILVDLMG 1141 MMVILGIQLN AVSVVNLIMS IGIAVEFCVH ISHAFLMSSG DREHRAREAL ETMGASVFSG 1201 ITLTKLVGVI VLCFARSEIF VVYYFQMYLA LVIIGFLHGL VFLPVILSLA GPPQLNLDIE 1261 QQQTDEASSS LLN //