LOCUS AEE86857.1 678 aa PRT PLN 23-MAR-2023 DEFINITION Arabidopsis thaliana Rhamnogalacturonate lyase family protein protein. ACCESSION CP002687-7023 PROTEIN_ID AEE86857.1 SOURCE Arabidopsis thaliana (thale cress) ORGANISM Arabidopsis thaliana Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis. REFERENCE 1 (bases 1 to 18585056) AUTHORS Mayer,K., Schuller,C., Wambutt,R., Murphy,G., Volckaert,G., Pohl,T., Dusterhoft,A., Stiekema,W., Entian,K.D., Terryn,N., Harris,B., Ansorge,W., Brandt,P., Grivell,L., Rieger,M., Weichselgartner,M., de Simone,V., Obermaier,B., Mache,R., Muller,M., Kreis,M., Delseny,M., Puigdomenech,P., Watson,M., Schmidtheini,T., Reichert,B., Portatelle,D., Perez-Alonso,M., Boutry,M., Bancroft,I., Vos,P., Hoheisel,J., Zimmermann,W., Wedler,H., Ridley,P., Langham,S.A., McCullagh,B., Bilham,L., Robben,J., Van der Schueren,J., Grymonprez,B., Chuang,Y.J., Vandenbussche,F., Braeken,M., Weltjens,I., Voet,M., Bastiaens,I., Aert,R., Defoor,E., Weitzenegger,T., Bothe,G., Ramsperger,U., Hilbert,H., Braun,M., Holzer,E., Brandt,A., Peters,S., van Staveren,M., Dirske,W., Mooijman,P., Klein Lankhorst,R., Rose,M., Hauf,J., Kotter,P., Berneiser,S., Hempel,S., Feldpausch,M., Lamberth,S., Van den Daele,H., De Keyser,A., Buysshaert,C., Gielen,J., Villarroel,R., De Clercq,R., Van Montagu,M., Rogers,J., Cronin,A., Quail,M., Bray-Allen,S., Clark,L., Doggett,J., Hall,S., Kay,M., Lennard,N., McLay,K., Mayes,R., Pettett,A., Rajandream,M.A., Lyne,M., Benes,V., Rechmann,S., Borkova,D., Blocker,H., Scharfe,M., Grimm,M., Lohnert,T.H., Dose,S., de Haan,M., Maarse,A., Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Fartmann,B., Granderath,K., Dauner,D., Herzl,A., Neumann,S., Argiriou,A., Vitale,D., Liguori,R., Piravandi,E., Massenet,O., Quigley,F., Clabauld,G., Mundlein,A., Felber,R., Schnabl,S., Hiller,R., Schmidt,W., Lecharny,A., Aubourg,S., Chefdor,F., Cooke,R., Berger,C., Montfort,A., Casacuberta,E., Gibbons,T., Weber,N., Vandenbol,M., Bargues,M., Terol,J., Torres,A., Perez-Perez,A., Purnelle,B., Bent,E., Johnson,S., Tacon,D., Jesse,T., Heijnen,L., Schwarz,S., Scholler,P., Heber,S., Francs,P., Bielke,C., Frishman,D., Haase,D., Lemcke,K., Mewes,H.W., Stocker,S., Zaccaria,P., Bevan,M., Wilson,R.K., de la Bastide,M., Habermann,K., Parnell,L., Dedhia,N., Gnoj,L., Schutz,K., Huang,E., Spiegel,L., Sehkon,M., Murray,J., Sheet,P., Cordes,M., Abu-Threideh,J., Stoneking,T., Kalicki,J., Graves,T., Harmon,G., Edwards,J., Latreille,P., Courtney,L., Cloud,J., Abbott,A., Scott,K., Johnson,D., Minx,P., Bentley,D., Fulton,B., Miller,N., Greco,T., Kemp,K., Kramer,J., Fulton,L., Mardis,E., Dante,M., Pepin,K., Hillier,L., Nelson,J., Spieth,J., Ryan,E., Andrews,S., Geisel,C., Layman,D., Du,H., Ali,J., Berghoff,A., Jones,K., Drone,K., Cotton,M., Joshu,C., Antonoiu,B., Zidanic,M., Strong,C., Sun,H., Lamar,B., Yordan,C., Ma,P., Zhong,J., Preston,R., Vil,D., Shekher,M., Matero,A., Shah,R., Swaby,I.K., O'Shaughnessy,A., Rodriguez,M., Hoffmann,J., Till,S., Granat,S., Shohdy,N., Hasegawa,A., Hameed,A., Lodhi,M., Johnson,A., Chen,E., Marra,M., Martienssen,R. and McCombie,W.R. TITLE Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana JOURNAL Nature 402 (6763), 769-777 (1999) PUBMED 10617198 REFERENCE 2 (bases 1 to 18585056) AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E. CONSRTM TAIR TITLE Direct Submission JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie Institution, 260 Panama Street, Stanford, CA, USA REFERENCE 3 (bases 1 to 18585056) AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M., Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R., Vaughn,M. and Town,C.D. TITLE Direct Submission JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute, 9704 Medical Center Dr, Rockville, MD 20850, USA REMARK Protein update by submitter FEATURES Qualifiers source /organism="Arabidopsis thaliana" /mol_type="genomic DNA" /db_xref="taxon:3702" /chromosome="4" /ecotype="Columbia" protein /locus_tag="AT4G37950" /gene_synonym="F20D10.70" /gene_synonym="F20D10_70" /inference="Similar to RNA sequence, EST:INSD:AU236569.1,INSD:BP590888.1,INSD:AU227521.1, INSD:BP590163.1" /inference="Similar to RNA sequence, mRNA:INSD:BT004121.1,INSD:AK228481.1" /note="Rhamnogalacturonate lyase family protein; CONTAINS InterPro DOMAIN/s: Rhamnogalacturonate lyase (InterPro:IPR010325), Carbohydrate-binding-like fold (InterPro:IPR013784), Galactose-binding domain-like (InterPro:IPR008979); BEST Arabidopsis thaliana protein match is: Rhamnogalacturonate lyase family protein (TAIR:AT2G22620.1); Has 315 Blast hits to 298 proteins in 69 species: Archae - 0; Bacteria - 55; Metazoa - 0; Fungi - 92; Plants - 168; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink)." /db_xref="TAIR:AT4G37950" /db_xref="Araport:AT4G37950" intron_pos 34:2 (1/14) intron_pos 61:0 (2/14) intron_pos 99:2 (3/14) intron_pos 116:2 (4/14) intron_pos 154:2 (5/14) intron_pos 194:2 (6/14) intron_pos 244:0 (7/14) intron_pos 301:0 (8/14) intron_pos 350:0 (9/14) intron_pos 385:2 (10/14) intron_pos 417:0 (11/14) intron_pos 464:1 (12/14) intron_pos 519:2 (13/14) intron_pos 558:2 (14/14) BEGIN 1 MEYGAPGMKA GRRVLTPLFV LVFLLQGVHS QTSRNKFNIA KAGHKLASPP VTLKKVGDNQ 61 VVVDNGIIDV TFSSPQGLIT RIKYNGLNNV LNDQIENRGY WDVVWYKPGQ VSSTDYLVGT 121 KFDIVNQTSE QIEISFSRTF SQRGSGIPLN VDKRYIIRRG VSGIYMYAVL ERLIGWPDVD 181 MDQIRIVFKL NTTKFDFMAV SDNRQKIMPF DTDRDITKGR ASPLAYKEAV HLINPQNHML 241 KGQVDDKYMY SVENKDNKVH GWISSDQRIG FWMITPSDEF HACGPIKQDL TSHVGPTTLS 301 MFTSVHYAGK DMNTNYKSKE PWKKVFGPVF VYLNSASSRN LLWTDAKRQM VSEVQSWPYD 361 FVKSVDYPLH HQRGTVKGQL FVIDRYIKNV TYLFGQFAFV GLALPGEAGS WQTENKGYQF 421 WTRADKMGMF TIANVRPGTY SLYAWVSGFI GDYKYVRDIT ITPGREIDVG HIVYVPPRNG 481 PTLWEIGQPD RTAAEFYIPD PDPTLFTKLY LNYSNPQDRF RQYGLWDRYS VLYPRNDLVF 541 TAGVSDYKKD WFYAHVNRKA GNGTYKATTW QIKFNLKAVI QTRIYTLRIA LAAASTIDLL 601 VWVNEVDSKP LFITGLIGRD NAIARHGIHG LYKLYNIDVH GKLLRVGNNT IFLTHGRNSD 661 SFSGVMYDYL RLEGPSGV //