LOCUS AEE86323.1 1108 aa PRT PLN 23-MAR-2023 DEFINITION Arabidopsis thaliana RING/U-box superfamily protein protein. ACCESSION CP002687-6295 PROTEIN_ID AEE86323.1 SOURCE Arabidopsis thaliana (thale cress) ORGANISM Arabidopsis thaliana Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis. REFERENCE 1 (bases 1 to 18585056) AUTHORS Mayer,K., Schuller,C., Wambutt,R., Murphy,G., Volckaert,G., Pohl,T., Dusterhoft,A., Stiekema,W., Entian,K.D., Terryn,N., Harris,B., Ansorge,W., Brandt,P., Grivell,L., Rieger,M., Weichselgartner,M., de Simone,V., Obermaier,B., Mache,R., Muller,M., Kreis,M., Delseny,M., Puigdomenech,P., Watson,M., Schmidtheini,T., Reichert,B., Portatelle,D., Perez-Alonso,M., Boutry,M., Bancroft,I., Vos,P., Hoheisel,J., Zimmermann,W., Wedler,H., Ridley,P., Langham,S.A., McCullagh,B., Bilham,L., Robben,J., Van der Schueren,J., Grymonprez,B., Chuang,Y.J., Vandenbussche,F., Braeken,M., Weltjens,I., Voet,M., Bastiaens,I., Aert,R., Defoor,E., Weitzenegger,T., Bothe,G., Ramsperger,U., Hilbert,H., Braun,M., Holzer,E., Brandt,A., Peters,S., van Staveren,M., Dirske,W., Mooijman,P., Klein Lankhorst,R., Rose,M., Hauf,J., Kotter,P., Berneiser,S., Hempel,S., Feldpausch,M., Lamberth,S., Van den Daele,H., De Keyser,A., Buysshaert,C., Gielen,J., Villarroel,R., De Clercq,R., Van Montagu,M., Rogers,J., Cronin,A., Quail,M., Bray-Allen,S., Clark,L., Doggett,J., Hall,S., Kay,M., Lennard,N., McLay,K., Mayes,R., Pettett,A., Rajandream,M.A., Lyne,M., Benes,V., Rechmann,S., Borkova,D., Blocker,H., Scharfe,M., Grimm,M., Lohnert,T.H., Dose,S., de Haan,M., Maarse,A., Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Fartmann,B., Granderath,K., Dauner,D., Herzl,A., Neumann,S., Argiriou,A., Vitale,D., Liguori,R., Piravandi,E., Massenet,O., Quigley,F., Clabauld,G., Mundlein,A., Felber,R., Schnabl,S., Hiller,R., Schmidt,W., Lecharny,A., Aubourg,S., Chefdor,F., Cooke,R., Berger,C., Montfort,A., Casacuberta,E., Gibbons,T., Weber,N., Vandenbol,M., Bargues,M., Terol,J., Torres,A., Perez-Perez,A., Purnelle,B., Bent,E., Johnson,S., Tacon,D., Jesse,T., Heijnen,L., Schwarz,S., Scholler,P., Heber,S., Francs,P., Bielke,C., Frishman,D., Haase,D., Lemcke,K., Mewes,H.W., Stocker,S., Zaccaria,P., Bevan,M., Wilson,R.K., de la Bastide,M., Habermann,K., Parnell,L., Dedhia,N., Gnoj,L., Schutz,K., Huang,E., Spiegel,L., Sehkon,M., Murray,J., Sheet,P., Cordes,M., Abu-Threideh,J., Stoneking,T., Kalicki,J., Graves,T., Harmon,G., Edwards,J., Latreille,P., Courtney,L., Cloud,J., Abbott,A., Scott,K., Johnson,D., Minx,P., Bentley,D., Fulton,B., Miller,N., Greco,T., Kemp,K., Kramer,J., Fulton,L., Mardis,E., Dante,M., Pepin,K., Hillier,L., Nelson,J., Spieth,J., Ryan,E., Andrews,S., Geisel,C., Layman,D., Du,H., Ali,J., Berghoff,A., Jones,K., Drone,K., Cotton,M., Joshu,C., Antonoiu,B., Zidanic,M., Strong,C., Sun,H., Lamar,B., Yordan,C., Ma,P., Zhong,J., Preston,R., Vil,D., Shekher,M., Matero,A., Shah,R., Swaby,I.K., O'Shaughnessy,A., Rodriguez,M., Hoffmann,J., Till,S., Granat,S., Shohdy,N., Hasegawa,A., Hameed,A., Lodhi,M., Johnson,A., Chen,E., Marra,M., Martienssen,R. and McCombie,W.R. TITLE Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana JOURNAL Nature 402 (6763), 769-777 (1999) PUBMED 10617198 REFERENCE 2 (bases 1 to 18585056) AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E. CONSRTM TAIR TITLE Direct Submission JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie Institution, 260 Panama Street, Stanford, CA, USA REFERENCE 3 (bases 1 to 18585056) AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M., Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R., Vaughn,M. and Town,C.D. TITLE Direct Submission JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute, 9704 Medical Center Dr, Rockville, MD 20850, USA REMARK Protein update by submitter FEATURES Qualifiers source /organism="Arabidopsis thaliana" /mol_type="genomic DNA" /db_xref="taxon:3702" /chromosome="4" /ecotype="Columbia" protein /gene="CER9" /locus_tag="AT4G34100" /gene_synonym="ECERIFERUM 9" /gene_synonym="F28A23.140" /gene_synonym="F28A23_140" /gene_synonym="SUD1" /gene_synonym="SUPPRESSOR OF DRY2 DEFECTS 1" /inference="Similar to RNA sequence, EST:INSD:EH822086.1,INSD:BP798593.1,INSD:EL224014.1, INSD:EL076663.1,INSD:EL275831.1,INSD:EG517513.1, INSD:EL138020.1,INSD:AV522850.1,INSD:EH958636.1, INSD:EL298162.1,INSD:EL220224.1,INSD:ES111737.1, INSD:EH946410.1,INSD:EH985975.1,INSD:ES102643.1, INSD:EL043489.1,INSD:CB185904.1,INSD:ES049669.1, INSD:EL149869.1,INSD:EH949141.1,INSD:EG518174.1, INSD:AV528384.1,INSD:BP647193.1,INSD:EL034229.1, INSD:EL969874.1,INSD:EH941225.1,INSD:EG518173.1, INSD:EL019816.1,INSD:EL311531.1,INSD:EG517512.1, INSD:BP841106.1,INSD:EL027118.1,INSD:T41618.1, INSD:EH957573.1,INSD:AV442398.1,INSD:BP823876.1, INSD:ES105936.1,INSD:EL248966.1,INSD:BP655861.1, INSD:EH951261.1,INSD:EL227317.1,INSD:EH882911.1, INSD:EL143296.1,INSD:EL143913.1,INSD:EH956806.1, INSD:AV441358.1,INSD:ES201789.1,INSD:BP650968.1, INSD:EL986146.1,INSD:EH889695.1,INSD:EH949193.1, INSD:BP830480.1,INSD:EL301039.1,INSD:AU239171.1, INSD:BP813200.1,INSD:EH844949.1,INSD:EL006219.1, INSD:EL240946.1,INSD:EH958238.1,INSD:EL123686.1" /inference="Similar to RNA sequence, mRNA:INSD:AK118311.1,INSD:BX828852.1,INSD:AK230154.1" /note="RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C3HC4 RING-type (InterPro:IPR018957), Zinc finger, RING-CH-type (InterPro:IPR011016); BEST Arabidopsis thaliana protein match is: RING/FYVE/PHD zinc finger superfamily protein (TAIR:AT4G32670.1); Has 2169 Blast hits to 1906 proteins in 224 species: Archae - 0; Bacteria - 0; Metazoa - 966; Fungi - 273; Plants - 550; Viruses - 44; Other Eukaryotes - 336 (source: NCBI BLink)." /db_xref="TAIR:AT4G34100" /db_xref="Araport:AT4G34100" intron_pos 113:0 (1/8) intron_pos 341:0 (2/8) intron_pos 595:0 (3/8) intron_pos 665:2 (4/8) intron_pos 788:2 (5/8) intron_pos 842:1 (6/8) intron_pos 897:0 (7/8) intron_pos 946:0 (8/8) BEGIN 1 MEISPADSLS ISGAAASEVV SEPSVSSSSS SSSPNQASPN PFSNMDPAVS TATGSRYVDD 61 DEDEEDVCRI CRNPGDADNP LRYPCACSGS IKFVHQDCLL QWLNHSNARQ CEVCKHPFSF 121 SPVYADNAPS RLPFQEFVVG IAMKACHVLQ FFLRLSFVLS VWLLTIPFIT FWIWRLAFVR 181 TFGEAQRLFL SHISTTVILT DCLHGFLLSA SIVFIFLGAT SLRDYFRHLR ELGGQEERDD 241 DVDRNGARAA RRPAGQANRN LAGEGNGEDA GDQGAAVGQI ARRNPENVLA RLDIQAARLE 301 AQVEQMFDGL DDADGAEDVP FDELVGMQGP VFHLVENAFT VLASNMIFLG VVIFVPFTLG 361 RIILYHVSWL FAAARGPAVA ASLHLTDTGL SLENITLKSA LTAVSNLTSE GQGNGLLGQL 421 TEMMKVNGSE LNGANNTLSV ATDLLKGSTV GASKLSDITT LAVGYMFIVF LVFLYLGIIA 481 LIRYAKGEPL TVGRFYGIAS IVEAVPSLLR QFLAAMRHLM TMIKVAFLLV IELGVFPLMC 541 GWWLDVCTVR MFGKTMSHRV QFLSISPLAS SLVHWVVGIM YMLQISIFVS LLRGVLRPGV 601 LYFLRDPADP NYNPFRDLID DPVHKHARRV LLSVAVYGSL IVMLVFLPVK LAIRMAPSIF 661 PLDISVSDPF TEIPADMLLF QICIPFIIEH FRLRTTIKSL LRCWFTGVGW ALGLTDFLLP 721 RPEDNIGQDN GNGEPGRQNR AQVLQVGGPD RAMAALPVAD DPNRSRLRAG NVNTGEEYED 781 DDEQSDSDRY NFVVRIILLL LVAWVTLLLF NSALIVVPVS LGRALFSAIP ILPITHGIKC 841 NDLYAFVIGT YAFWTTISGA RYAIEHVKSK RTSVLLNQIW KWCGIVFKSS VLLAIWVFII 901 PVLIGLLFEL LVIVPMRVPV DESPVFLLYQ DWALGLIFLK IWTRLVMLDH MLPIVDDSWR 961 AKFERVREDG FSRLQGLWVL REIVFPIVMK LLTALCVPYV LARGVFPMLG YPLVVNSAVY 1021 RFAWIGCLSV SLFCFCAKRC HVWFRNLHNS IRDDRYLIGR RLHNFGEAAL ANQNQNQSSE 1081 DAGDGVLIGR EGDVDNGLRL RRAIQQEA //