LOCUS AEE86109.1 433 aa PRT PLN 23-MAR-2023 DEFINITION Arabidopsis thaliana La protein 1 protein. ACCESSION CP002687-6005 PROTEIN_ID AEE86109.1 SOURCE Arabidopsis thaliana (thale cress) ORGANISM Arabidopsis thaliana Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis. REFERENCE 1 (bases 1 to 18585056) AUTHORS Mayer,K., Schuller,C., Wambutt,R., Murphy,G., Volckaert,G., Pohl,T., Dusterhoft,A., Stiekema,W., Entian,K.D., Terryn,N., Harris,B., Ansorge,W., Brandt,P., Grivell,L., Rieger,M., Weichselgartner,M., de Simone,V., Obermaier,B., Mache,R., Muller,M., Kreis,M., Delseny,M., Puigdomenech,P., Watson,M., Schmidtheini,T., Reichert,B., Portatelle,D., Perez-Alonso,M., Boutry,M., Bancroft,I., Vos,P., Hoheisel,J., Zimmermann,W., Wedler,H., Ridley,P., Langham,S.A., McCullagh,B., Bilham,L., Robben,J., Van der Schueren,J., Grymonprez,B., Chuang,Y.J., Vandenbussche,F., Braeken,M., Weltjens,I., Voet,M., Bastiaens,I., Aert,R., Defoor,E., Weitzenegger,T., Bothe,G., Ramsperger,U., Hilbert,H., Braun,M., Holzer,E., Brandt,A., Peters,S., van Staveren,M., Dirske,W., Mooijman,P., Klein Lankhorst,R., Rose,M., Hauf,J., Kotter,P., Berneiser,S., Hempel,S., Feldpausch,M., Lamberth,S., Van den Daele,H., De Keyser,A., Buysshaert,C., Gielen,J., Villarroel,R., De Clercq,R., Van Montagu,M., Rogers,J., Cronin,A., Quail,M., Bray-Allen,S., Clark,L., Doggett,J., Hall,S., Kay,M., Lennard,N., McLay,K., Mayes,R., Pettett,A., Rajandream,M.A., Lyne,M., Benes,V., Rechmann,S., Borkova,D., Blocker,H., Scharfe,M., Grimm,M., Lohnert,T.H., Dose,S., de Haan,M., Maarse,A., Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Fartmann,B., Granderath,K., Dauner,D., Herzl,A., Neumann,S., Argiriou,A., Vitale,D., Liguori,R., Piravandi,E., Massenet,O., Quigley,F., Clabauld,G., Mundlein,A., Felber,R., Schnabl,S., Hiller,R., Schmidt,W., Lecharny,A., Aubourg,S., Chefdor,F., Cooke,R., Berger,C., Montfort,A., Casacuberta,E., Gibbons,T., Weber,N., Vandenbol,M., Bargues,M., Terol,J., Torres,A., Perez-Perez,A., Purnelle,B., Bent,E., Johnson,S., Tacon,D., Jesse,T., Heijnen,L., Schwarz,S., Scholler,P., Heber,S., Francs,P., Bielke,C., Frishman,D., Haase,D., Lemcke,K., Mewes,H.W., Stocker,S., Zaccaria,P., Bevan,M., Wilson,R.K., de la Bastide,M., Habermann,K., Parnell,L., Dedhia,N., Gnoj,L., Schutz,K., Huang,E., Spiegel,L., Sehkon,M., Murray,J., Sheet,P., Cordes,M., Abu-Threideh,J., Stoneking,T., Kalicki,J., Graves,T., Harmon,G., Edwards,J., Latreille,P., Courtney,L., Cloud,J., Abbott,A., Scott,K., Johnson,D., Minx,P., Bentley,D., Fulton,B., Miller,N., Greco,T., Kemp,K., Kramer,J., Fulton,L., Mardis,E., Dante,M., Pepin,K., Hillier,L., Nelson,J., Spieth,J., Ryan,E., Andrews,S., Geisel,C., Layman,D., Du,H., Ali,J., Berghoff,A., Jones,K., Drone,K., Cotton,M., Joshu,C., Antonoiu,B., Zidanic,M., Strong,C., Sun,H., Lamar,B., Yordan,C., Ma,P., Zhong,J., Preston,R., Vil,D., Shekher,M., Matero,A., Shah,R., Swaby,I.K., O'Shaughnessy,A., Rodriguez,M., Hoffmann,J., Till,S., Granat,S., Shohdy,N., Hasegawa,A., Hameed,A., Lodhi,M., Johnson,A., Chen,E., Marra,M., Martienssen,R. and McCombie,W.R. TITLE Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana JOURNAL Nature 402 (6763), 769-777 (1999) PUBMED 10617198 REFERENCE 2 (bases 1 to 18585056) AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E. CONSRTM TAIR TITLE Direct Submission JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie Institution, 260 Panama Street, Stanford, CA, USA REFERENCE 3 (bases 1 to 18585056) AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M., Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R., Vaughn,M. and Town,C.D. TITLE Direct Submission JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute, 9704 Medical Center Dr, Rockville, MD 20850, USA REMARK Protein update by submitter FEATURES Qualifiers source /organism="Arabidopsis thaliana" /mol_type="genomic DNA" /db_xref="taxon:3702" /chromosome="4" /ecotype="Columbia" protein /gene="La1" /locus_tag="AT4G32720" /gene_synonym="AtLa1" /gene_synonym="F4D11.80" /gene_synonym="F4D11_80" /gene_synonym="La protein 1" /inference="Similar to RNA sequence, EST:INSD:F15295.1,INSD:BP779011.1,INSD:AV794970.1, INSD:BP777795.1,INSD:BP794793.1,INSD:BP567528.1, INSD:EL336330.1,INSD:DR252587.1,INSD:EL122978.1, INSD:ES050201.1,INSD:AV826446.1,INSD:DR252573.1, INSD:EG423644.1,INSD:BP583978.1,INSD:DR252580.1, INSD:DR252574.1,INSD:F15294.1,INSD:BP594373.1, INSD:EL193588.1,INSD:EH925418.1,INSD:DR252577.1, INSD:ES124588.1,INSD:BP645118.1,INSD:AV543053.1, INSD:AV519909.1,INSD:BP591125.1,INSD:AV820387.1, INSD:DR252591.1,INSD:EL970817.1,INSD:EL150728.1, INSD:BP584258.1,INSD:DR252589.1,INSD:EL276338.1, INSD:ES042293.1,INSD:EL263241.1,INSD:DR252588.1, INSD:ES065700.1,INSD:EL025852.1,INSD:AV538041.1, INSD:BP791694.1,INSD:DR252592.1,INSD:DR252581.1, INSD:AV832277.1,INSD:AV550185.1,INSD:DR252576.1, INSD:ES004561.1,INSD:BP829570.1,INSD:DR252578.1, INSD:BP671691.1,INSD:BP830643.1,INSD:N96627.1, INSD:BP580492.1,INSD:BP652859.1,INSD:EH939076.1, INSD:DR252579.1,INSD:DR252594.1,INSD:ES027258.1, INSD:DR252582.1,INSD:DR252584.1,INSD:AV832283.1, INSD:BP564675.1,INSD:DR252585.1,INSD:ES160024.1, INSD:DR252590.1,INSD:AV789314.1,INSD:ES152020.1, INSD:EG423643.1,INSD:ES158751.1,INSD:DR252575.1, INSD:DR252593.1,INSD:DR252583.1,INSD:BP563804.1, INSD:DR252586.1,INSD:DR381143.1,INSD:EH964058.1, INSD:BP806850.1,INSD:AV820325.1" /inference="Similar to RNA sequence, mRNA:INSD:BX827662.1,INSD:BX827316.1,INSD:BT000396.1, INSD:AY136302.1,INSD:AY056237.1,INSD:BX827329.1" /note="La protein 1 (La1); FUNCTIONS IN: RNA binding; INVOLVED IN: embryo development, ribosome biogenesis; LOCATED IN: nucleoplasm, cell wall; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), RNA-binding protein Lupus La (InterPro:IPR006630), Lupus La protein (InterPro:IPR002344), RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677), RNA-binding motif (InterPro:IPR014886); BEST Arabidopsis thaliana protein match is: RNA recognition motif (RRM)-containing protein (TAIR:AT1G79880.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink)." /db_xref="TAIR:AT4G32720" /db_xref="Araport:AT4G32720" intron_pos 18:0 (1/9) intron_pos 44:1 (2/9) intron_pos 94:1 (3/9) intron_pos 142:0 (4/9) intron_pos 191:2 (5/9) intron_pos 232:2 (6/9) intron_pos 331:0 (7/9) intron_pos 380:1 (8/9) intron_pos 404:2 (9/9) BEGIN 1 MSIPCLTEET AKTVLRQVEF YFSDSNLPID DFLKKTVTES EDGLVSLALI CSFSKMRGYL 61 KLGDSKGDDI PEDTIKAVAD TLRTSSALKI SDDGKKVGRS TELLKLEDLI EQLNARTVAA 121 SPFSYDVKRE DVESFFSQYG KVNSVRMPRH VAESRIFSGV ALVEFPTEED AQNVMKQNLV 181 FAGQELELKP KKEFDNEREK DEVKFANYQP QKGSANQKNG SDHKNNSAYE PDYPKGLIIS 241 FTLKRSAEEG TTEQKSSEEP TDKTMEESET KPADTPDADK ENTGEVQAEG AEDEDDEKEE 301 KGALATHKDN KDVVLREDLK AVFGKFGDVK FVDFKMGSET GYLRFDEPEA SQKARAAAVL 361 ANEGGLAVKN FIAVLEPVIG EAEKEYWTLL RSKDRFDKGG RGGRGGRRGG RFGRKRGSDS 421 PGGRWNKSQK VEA //