LOCUS AEE85877.1 650 aa PRT PLN 23-MAR-2023 DEFINITION Arabidopsis thaliana SWAP (Suppressor-of-White-APricot) /surp RNA-binding domain-containing protein protein. ACCESSION CP002687-5684 PROTEIN_ID AEE85877.1 SOURCE Arabidopsis thaliana (thale cress) ORGANISM Arabidopsis thaliana Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis. REFERENCE 1 (bases 1 to 18585056) AUTHORS Mayer,K., Schuller,C., Wambutt,R., Murphy,G., Volckaert,G., Pohl,T., Dusterhoft,A., Stiekema,W., Entian,K.D., Terryn,N., Harris,B., Ansorge,W., Brandt,P., Grivell,L., Rieger,M., Weichselgartner,M., de Simone,V., Obermaier,B., Mache,R., Muller,M., Kreis,M., Delseny,M., Puigdomenech,P., Watson,M., Schmidtheini,T., Reichert,B., Portatelle,D., Perez-Alonso,M., Boutry,M., Bancroft,I., Vos,P., Hoheisel,J., Zimmermann,W., Wedler,H., Ridley,P., Langham,S.A., McCullagh,B., Bilham,L., Robben,J., Van der Schueren,J., Grymonprez,B., Chuang,Y.J., Vandenbussche,F., Braeken,M., Weltjens,I., Voet,M., Bastiaens,I., Aert,R., Defoor,E., Weitzenegger,T., Bothe,G., Ramsperger,U., Hilbert,H., Braun,M., Holzer,E., Brandt,A., Peters,S., van Staveren,M., Dirske,W., Mooijman,P., Klein Lankhorst,R., Rose,M., Hauf,J., Kotter,P., Berneiser,S., Hempel,S., Feldpausch,M., Lamberth,S., Van den Daele,H., De Keyser,A., Buysshaert,C., Gielen,J., Villarroel,R., De Clercq,R., Van Montagu,M., Rogers,J., Cronin,A., Quail,M., Bray-Allen,S., Clark,L., Doggett,J., Hall,S., Kay,M., Lennard,N., McLay,K., Mayes,R., Pettett,A., Rajandream,M.A., Lyne,M., Benes,V., Rechmann,S., Borkova,D., Blocker,H., Scharfe,M., Grimm,M., Lohnert,T.H., Dose,S., de Haan,M., Maarse,A., Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Fartmann,B., Granderath,K., Dauner,D., Herzl,A., Neumann,S., Argiriou,A., Vitale,D., Liguori,R., Piravandi,E., Massenet,O., Quigley,F., Clabauld,G., Mundlein,A., Felber,R., Schnabl,S., Hiller,R., Schmidt,W., Lecharny,A., Aubourg,S., Chefdor,F., Cooke,R., Berger,C., Montfort,A., Casacuberta,E., Gibbons,T., Weber,N., Vandenbol,M., Bargues,M., Terol,J., Torres,A., Perez-Perez,A., Purnelle,B., Bent,E., Johnson,S., Tacon,D., Jesse,T., Heijnen,L., Schwarz,S., Scholler,P., Heber,S., Francs,P., Bielke,C., Frishman,D., Haase,D., Lemcke,K., Mewes,H.W., Stocker,S., Zaccaria,P., Bevan,M., Wilson,R.K., de la Bastide,M., Habermann,K., Parnell,L., Dedhia,N., Gnoj,L., Schutz,K., Huang,E., Spiegel,L., Sehkon,M., Murray,J., Sheet,P., Cordes,M., Abu-Threideh,J., Stoneking,T., Kalicki,J., Graves,T., Harmon,G., Edwards,J., Latreille,P., Courtney,L., Cloud,J., Abbott,A., Scott,K., Johnson,D., Minx,P., Bentley,D., Fulton,B., Miller,N., Greco,T., Kemp,K., Kramer,J., Fulton,L., Mardis,E., Dante,M., Pepin,K., Hillier,L., Nelson,J., Spieth,J., Ryan,E., Andrews,S., Geisel,C., Layman,D., Du,H., Ali,J., Berghoff,A., Jones,K., Drone,K., Cotton,M., Joshu,C., Antonoiu,B., Zidanic,M., Strong,C., Sun,H., Lamar,B., Yordan,C., Ma,P., Zhong,J., Preston,R., Vil,D., Shekher,M., Matero,A., Shah,R., Swaby,I.K., O'Shaughnessy,A., Rodriguez,M., Hoffmann,J., Till,S., Granat,S., Shohdy,N., Hasegawa,A., Hameed,A., Lodhi,M., Johnson,A., Chen,E., Marra,M., Martienssen,R. and McCombie,W.R. TITLE Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana JOURNAL Nature 402 (6763), 769-777 (1999) PUBMED 10617198 REFERENCE 2 (bases 1 to 18585056) AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E. CONSRTM TAIR TITLE Direct Submission JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie Institution, 260 Panama Street, Stanford, CA, USA REFERENCE 3 (bases 1 to 18585056) AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M., Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R., Vaughn,M. and Town,C.D. TITLE Direct Submission JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute, 9704 Medical Center Dr, Rockville, MD 20850, USA REMARK Protein update by submitter FEATURES Qualifiers source /organism="Arabidopsis thaliana" /mol_type="genomic DNA" /db_xref="taxon:3702" /chromosome="4" /ecotype="Columbia" protein /locus_tag="AT4G31200" /gene_synonym="F8F16.10" /gene_synonym="F8F16_10" /inference="Similar to RNA sequence, EST:INSD:BX839903.1,INSD:ES120067.1,INSD:AV538702.1, INSD:ES111830.1,INSD:EL026562.1,INSD:EG452231.1, INSD:AU230096.1,INSD:AU238849.1,INSD:BX841215.1, INSD:BX835884.1,INSD:BE526177.1,INSD:ES172547.1" /inference="Similar to RNA sequence, mRNA:INSD:BT010740.1,INSD:AK229583.1,INSD:BX827821.1" /note="SWAP (Suppressor-of-White-APricot)/surp RNA-binding domain-containing protein; FUNCTIONS IN: RNA binding; INVOLVED IN: RNA processing; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF618 (InterPro:IPR006903), SWAP/Surp (InterPro:IPR000061), RNA polymerase II, large subunit, CTD (InterPro:IPR006569); Has 15613 Blast hits to 10676 proteins in 664 species: Archae - 6; Bacteria - 799; Metazoa - 6418; Fungi - 3065; Plants - 3018; Viruses - 214; Other Eukaryotes - 2093 (source: NCBI BLink)." /db_xref="TAIR:AT4G31200" /db_xref="Araport:AT4G31200" intron_pos 337:2 (1/2) intron_pos 428:1 (2/2) BEGIN 1 MDRRQHDYAA SSGLPYAQQQ QQQGPNFQQQ QQPQFGFHPQ HPQYPSPMNA SGFIPPHPSM 61 QQFPYQHPMH QQQQPQHLPH PPHPQMFGQQ QPQAFLPHLP PHHLPPPFPG PYDSAPPPPP 121 PADPELQKRI DKLVEYSVKN GPEFEAMMRD RQKDNPDYAF LFGGEGHGYY RYKHFLSMHP 181 PGGPFDPPFP SSSMPMIHHP PNPMMSPSMN NVPGALAVPP IRQPPFPPFH DHHQLQQHLP 241 QPHPFAPHAR PDFDQSTHAF RGLSGPLPAD VAMELNGVLG NLNGTKESIK SAKIWFMQRS 301 PFAPALAEAL RDRVFAMDDS DRQMHIVYLA NDILFDSLQR RTNLHEFDNE ALAFRPILGS 361 MLGRIYHFPQ NKEENQSRLE KILQFWASKE VFDQDTISSL EKEMKSGPPA NTFSHSPIIA 421 AHALQRPGML QQPPNSNVSS TMNLEHLTNP VATQQFIPNV MPPGAFPGSI PLNASVPPPT 481 QPPAGEKPPP YPLFPPGLIP GMVRKMQIGS GVPYSPLSPL DIPTVIPPSD TPQSEVLERV 541 SKFFKEIGEV NPSEGPMGSE SQDDYDNYER DSPQRKGGAC IPPPPNLQVD PETGTYADGS 601 TDKKSGSGRL GLGATADPNE PTQYDDVYTS YRKHRSTNYH TSMSARATTR //