LOCUS AEE85873.1 558 aa PRT PLN 23-MAR-2023 DEFINITION Arabidopsis thaliana Class II aminoacyl-tRNA and biotin synthetases superfamily protein protein. ACCESSION CP002687-5680 PROTEIN_ID AEE85873.1 SOURCE Arabidopsis thaliana (thale cress) ORGANISM Arabidopsis thaliana Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis. REFERENCE 1 (bases 1 to 18585056) AUTHORS Mayer,K., Schuller,C., Wambutt,R., Murphy,G., Volckaert,G., Pohl,T., Dusterhoft,A., Stiekema,W., Entian,K.D., Terryn,N., Harris,B., Ansorge,W., Brandt,P., Grivell,L., Rieger,M., Weichselgartner,M., de Simone,V., Obermaier,B., Mache,R., Muller,M., Kreis,M., Delseny,M., Puigdomenech,P., Watson,M., Schmidtheini,T., Reichert,B., Portatelle,D., Perez-Alonso,M., Boutry,M., Bancroft,I., Vos,P., Hoheisel,J., Zimmermann,W., Wedler,H., Ridley,P., Langham,S.A., McCullagh,B., Bilham,L., Robben,J., Van der Schueren,J., Grymonprez,B., Chuang,Y.J., Vandenbussche,F., Braeken,M., Weltjens,I., Voet,M., Bastiaens,I., Aert,R., Defoor,E., Weitzenegger,T., Bothe,G., Ramsperger,U., Hilbert,H., Braun,M., Holzer,E., Brandt,A., Peters,S., van Staveren,M., Dirske,W., Mooijman,P., Klein Lankhorst,R., Rose,M., Hauf,J., Kotter,P., Berneiser,S., Hempel,S., Feldpausch,M., Lamberth,S., Van den Daele,H., De Keyser,A., Buysshaert,C., Gielen,J., Villarroel,R., De Clercq,R., Van Montagu,M., Rogers,J., Cronin,A., Quail,M., Bray-Allen,S., Clark,L., Doggett,J., Hall,S., Kay,M., Lennard,N., McLay,K., Mayes,R., Pettett,A., Rajandream,M.A., Lyne,M., Benes,V., Rechmann,S., Borkova,D., Blocker,H., Scharfe,M., Grimm,M., Lohnert,T.H., Dose,S., de Haan,M., Maarse,A., Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Fartmann,B., Granderath,K., Dauner,D., Herzl,A., Neumann,S., Argiriou,A., Vitale,D., Liguori,R., Piravandi,E., Massenet,O., Quigley,F., Clabauld,G., Mundlein,A., Felber,R., Schnabl,S., Hiller,R., Schmidt,W., Lecharny,A., Aubourg,S., Chefdor,F., Cooke,R., Berger,C., Montfort,A., Casacuberta,E., Gibbons,T., Weber,N., Vandenbol,M., Bargues,M., Terol,J., Torres,A., Perez-Perez,A., Purnelle,B., Bent,E., Johnson,S., Tacon,D., Jesse,T., Heijnen,L., Schwarz,S., Scholler,P., Heber,S., Francs,P., Bielke,C., Frishman,D., Haase,D., Lemcke,K., Mewes,H.W., Stocker,S., Zaccaria,P., Bevan,M., Wilson,R.K., de la Bastide,M., Habermann,K., Parnell,L., Dedhia,N., Gnoj,L., Schutz,K., Huang,E., Spiegel,L., Sehkon,M., Murray,J., Sheet,P., Cordes,M., Abu-Threideh,J., Stoneking,T., Kalicki,J., Graves,T., Harmon,G., Edwards,J., Latreille,P., Courtney,L., Cloud,J., Abbott,A., Scott,K., Johnson,D., Minx,P., Bentley,D., Fulton,B., Miller,N., Greco,T., Kemp,K., Kramer,J., Fulton,L., Mardis,E., Dante,M., Pepin,K., Hillier,L., Nelson,J., Spieth,J., Ryan,E., Andrews,S., Geisel,C., Layman,D., Du,H., Ali,J., Berghoff,A., Jones,K., Drone,K., Cotton,M., Joshu,C., Antonoiu,B., Zidanic,M., Strong,C., Sun,H., Lamar,B., Yordan,C., Ma,P., Zhong,J., Preston,R., Vil,D., Shekher,M., Matero,A., Shah,R., Swaby,I.K., O'Shaughnessy,A., Rodriguez,M., Hoffmann,J., Till,S., Granat,S., Shohdy,N., Hasegawa,A., Hameed,A., Lodhi,M., Johnson,A., Chen,E., Marra,M., Martienssen,R. and McCombie,W.R. TITLE Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana JOURNAL Nature 402 (6763), 769-777 (1999) PUBMED 10617198 REFERENCE 2 (bases 1 to 18585056) AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E. CONSRTM TAIR TITLE Direct Submission JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie Institution, 260 Panama Street, Stanford, CA, USA REFERENCE 3 (bases 1 to 18585056) AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M., Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R., Vaughn,M. and Town,C.D. TITLE Direct Submission JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute, 9704 Medical Center Dr, Rockville, MD 20850, USA REMARK Protein update by submitter FEATURES Qualifiers source /organism="Arabidopsis thaliana" /mol_type="genomic DNA" /db_xref="taxon:3702" /chromosome="4" /ecotype="Columbia" protein /locus_tag="AT4G31180" /gene_synonym="F6E21.100" /gene_synonym="F6E21_100" /gene_synonym="IBI1" /gene_synonym="impaired in BABA-induced disease immunity 1" /inference="Similar to RNA sequence, EST:INSD:EH930295.1,INSD:AV536867.1,INSD:BP619073.1, INSD:BP823854.1,INSD:EH910045.1,INSD:ES018613.1, INSD:EL163551.1,INSD:DR374236.1,INSD:W43890.1, INSD:BP561474.1,INSD:BP846266.1,INSD:ES060996.1, INSD:ES093447.1,INSD:ES204276.1,INSD:BP640857.1, INSD:EL999108.1,INSD:EL029148.1,INSD:BE529005.1, INSD:EL322415.1,INSD:ES109887.1,INSD:BP816708.1, INSD:EL053249.1,INSD:ES104919.1,INSD:BP829091.1, INSD:EL260770.1,INSD:EL071075.1,INSD:EG445531.1, INSD:BX838896.1,INSD:AV817262.1,INSD:EL111059.1, INSD:H36577.1,INSD:BP647406.1,INSD:EL218767.1, INSD:BU635772.1,INSD:EL198525.1,INSD:EL151111.1, INSD:DR205000.1,INSD:CB262421.1,INSD:F14047.1, INSD:BP817411.2,INSD:EL990067.1,INSD:AV440079.1, INSD:F13974.1,INSD:BP566450.1,INSD:ES091127.1, INSD:AV522160.1,INSD:BP574235.1,INSD:AV792316.1, INSD:EH902493.1,INSD:DR205005.1,INSD:BP570380.1, INSD:DR383021.1,INSD:AV559922.1,INSD:ES049182.1, INSD:EL124677.1,INSD:BP621167.1,INSD:CB185538.1, INSD:ES021019.1,INSD:ES042505.1,INSD:ES127149.1, INSD:DR205002.1,INSD:DR205001.1,INSD:ES207763.1, INSD:ES169570.1,INSD:BP839880.1,INSD:ES028960.1, INSD:EH972738.1,INSD:EG516426.1,INSD:CB260004.1, INSD:BP671073.1,INSD:BP807628.1,INSD:EL086412.1, INSD:EL147439.1,INSD:BP653545.1,INSD:BX834193.1, INSD:AV803960.1,INSD:BP588497.1,INSD:EL047913.1, INSD:DR204993.1,INSD:BE524782.1,INSD:DR205003.1, INSD:AA651200.1,INSD:DR204994.1,INSD:DR205004.1, INSD:EL141302.1,INSD:EL206520.1,INSD:DR355545.1, INSD:BP563443.1,INSD:BP616338.1,INSD:BP662016.1, INSD:EL190380.1,INSD:BP621080.1,INSD:BP827172.1, INSD:EL113992.1,INSD:DR204998.1,INSD:EH964037.1, INSD:EL998779.1,INSD:ES180137.1,INSD:BP807656.1, INSD:BP609733.1,INSD:BP822988.1,INSD:EH936775.1, INSD:EL067298.1,INSD:EL133644.1,INSD:BE522877.1, INSD:DR204996.1,INSD:ES181029.1,INSD:BE037698.1, INSD:EL218464.1" /inference="Similar to RNA sequence, mRNA:INSD:BT002567.1,INSD:AY072331.1" /note="Class II aminoacyl-tRNA and biotin synthetases superfamily protein; FUNCTIONS IN: aminoacyl-tRNA ligase activity, aspartate-tRNA ligase activity, nucleotide binding, ATP binding, nucleic acid binding; INVOLVED IN: response to cadmium ion, aspartyl-tRNA aminoacylation; LOCATED IN: chloroplast, cytoplasm; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Aspartyl-tRNA synthetase, class IIb, archea/euk type (InterPro:IPR004523), Nucleic acid-binding, OB-fold (InterPro:IPR012340), Nucleic acid binding, OB-fold, tRNA/helicase-type (InterPro:IPR004365), Aminoacyl-tRNA synthetase, class II, conserved domain (InterPro:IPR006195), Aspartyl/Asparaginyl-tRNA synthetase, class IIb (InterPro:IPR002312), Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Aminoacyl-tRNA synthetase, class II (D/K/N) (InterPro:IPR004364), Aminoacyl-tRNA synthetase, class II (D/K/N)-like (InterPro:IPR018150); BEST Arabidopsis thaliana protein match is: Class II aminoacyl-tRNA and biotin synthetases superfamily protein (TAIR:AT4G26870.1); Has 27000 Blast hits to 21362 proteins in 2984 species: Archae - 448; Bacteria - 18821; Metazoa - 751; Fungi - 935; Plants - 402; Viruses - 0; Other Eukaryotes - 5643 (source: NCBI BLink)." /db_xref="TAIR:AT4G31180" /db_xref="Araport:AT4G31180" intron_pos 187:0 (1/9) intron_pos 224:0 (2/9) intron_pos 262:0 (3/9) intron_pos 359:0 (4/9) intron_pos 396:0 (5/9) intron_pos 414:0 (6/9) intron_pos 440:2 (7/9) intron_pos 479:1 (8/9) intron_pos 517:2 (9/9) BEGIN 1 MSSESEIPPL SSSTAAAEES GEKTSKKAAK KEAAKLEKLR RRQEQEEATR RTASISLEEN 61 DEFSNNYGDV TLTELQSSAD PKAGKWIEAV EGKEWTDVSD LVEEMLESEV LIRGRVHTNR 121 PTSNKLGFVV LRESGSTVQC VVSQSEKTKV GANMVKYLKQ LSRESFVDVI GVVTLPKEPL 181 TGTTQQVEIQ VRKVYCINKS LAKLPLSVED AARSEADIEA SLQTPSPAAR VNQDTRLNYR 241 VLDLRTPANQ AIFQLQYEVE YAFREKLRFK NFVGIHTPKL MAGSSEGGSA VFRLEYKGQP 301 ACLAQSPQLH KQMAICGDLR RVFEVGPVFR AEDSFTHRHL CEFVGLDVEM EIRKHYSEIM 361 DLVDELFVFI FTSLNERCKK ELQAVGKQYP FEPLKFLPKT LRLTFEEGVQ MLKEAGVEVD 421 PLGDLNTESE RKLGQLVLEK YNTEFYILHR YPKAVRPFYT MTCADNPLYS NSFDVFIRGE 481 EIISGAQRVH IPEVLEQRAG ECGIDVKTIS TYIDSFRYGA PLHGGFGVGL ERVVMLFCAL 541 NNIRKTSLFP RDPQRLSP //