LOCUS AEE85127.1 861 aa PRT PLN 23-MAR-2023 DEFINITION Arabidopsis thaliana pumilio 6 protein. ACCESSION CP002687-4659 PROTEIN_ID AEE85127.1 SOURCE Arabidopsis thaliana (thale cress) ORGANISM Arabidopsis thaliana Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis. REFERENCE 1 (bases 1 to 18585056) AUTHORS Mayer,K., Schuller,C., Wambutt,R., Murphy,G., Volckaert,G., Pohl,T., Dusterhoft,A., Stiekema,W., Entian,K.D., Terryn,N., Harris,B., Ansorge,W., Brandt,P., Grivell,L., Rieger,M., Weichselgartner,M., de Simone,V., Obermaier,B., Mache,R., Muller,M., Kreis,M., Delseny,M., Puigdomenech,P., Watson,M., Schmidtheini,T., Reichert,B., Portatelle,D., Perez-Alonso,M., Boutry,M., Bancroft,I., Vos,P., Hoheisel,J., Zimmermann,W., Wedler,H., Ridley,P., Langham,S.A., McCullagh,B., Bilham,L., Robben,J., Van der Schueren,J., Grymonprez,B., Chuang,Y.J., Vandenbussche,F., Braeken,M., Weltjens,I., Voet,M., Bastiaens,I., Aert,R., Defoor,E., Weitzenegger,T., Bothe,G., Ramsperger,U., Hilbert,H., Braun,M., Holzer,E., Brandt,A., Peters,S., van Staveren,M., Dirske,W., Mooijman,P., Klein Lankhorst,R., Rose,M., Hauf,J., Kotter,P., Berneiser,S., Hempel,S., Feldpausch,M., Lamberth,S., Van den Daele,H., De Keyser,A., Buysshaert,C., Gielen,J., Villarroel,R., De Clercq,R., Van Montagu,M., Rogers,J., Cronin,A., Quail,M., Bray-Allen,S., Clark,L., Doggett,J., Hall,S., Kay,M., Lennard,N., McLay,K., Mayes,R., Pettett,A., Rajandream,M.A., Lyne,M., Benes,V., Rechmann,S., Borkova,D., Blocker,H., Scharfe,M., Grimm,M., Lohnert,T.H., Dose,S., de Haan,M., Maarse,A., Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Fartmann,B., Granderath,K., Dauner,D., Herzl,A., Neumann,S., Argiriou,A., Vitale,D., Liguori,R., Piravandi,E., Massenet,O., Quigley,F., Clabauld,G., Mundlein,A., Felber,R., Schnabl,S., Hiller,R., Schmidt,W., Lecharny,A., Aubourg,S., Chefdor,F., Cooke,R., Berger,C., Montfort,A., Casacuberta,E., Gibbons,T., Weber,N., Vandenbol,M., Bargues,M., Terol,J., Torres,A., Perez-Perez,A., Purnelle,B., Bent,E., Johnson,S., Tacon,D., Jesse,T., Heijnen,L., Schwarz,S., Scholler,P., Heber,S., Francs,P., Bielke,C., Frishman,D., Haase,D., Lemcke,K., Mewes,H.W., Stocker,S., Zaccaria,P., Bevan,M., Wilson,R.K., de la Bastide,M., Habermann,K., Parnell,L., Dedhia,N., Gnoj,L., Schutz,K., Huang,E., Spiegel,L., Sehkon,M., Murray,J., Sheet,P., Cordes,M., Abu-Threideh,J., Stoneking,T., Kalicki,J., Graves,T., Harmon,G., Edwards,J., Latreille,P., Courtney,L., Cloud,J., Abbott,A., Scott,K., Johnson,D., Minx,P., Bentley,D., Fulton,B., Miller,N., Greco,T., Kemp,K., Kramer,J., Fulton,L., Mardis,E., Dante,M., Pepin,K., Hillier,L., Nelson,J., Spieth,J., Ryan,E., Andrews,S., Geisel,C., Layman,D., Du,H., Ali,J., Berghoff,A., Jones,K., Drone,K., Cotton,M., Joshu,C., Antonoiu,B., Zidanic,M., Strong,C., Sun,H., Lamar,B., Yordan,C., Ma,P., Zhong,J., Preston,R., Vil,D., Shekher,M., Matero,A., Shah,R., Swaby,I.K., O'Shaughnessy,A., Rodriguez,M., Hoffmann,J., Till,S., Granat,S., Shohdy,N., Hasegawa,A., Hameed,A., Lodhi,M., Johnson,A., Chen,E., Marra,M., Martienssen,R. and McCombie,W.R. TITLE Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana JOURNAL Nature 402 (6763), 769-777 (1999) PUBMED 10617198 REFERENCE 2 (bases 1 to 18585056) AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E. CONSRTM TAIR TITLE Direct Submission JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie Institution, 260 Panama Street, Stanford, CA, USA REFERENCE 3 (bases 1 to 18585056) AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M., Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R., Vaughn,M. and Town,C.D. TITLE Direct Submission JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute, 9704 Medical Center Dr, Rockville, MD 20850, USA REMARK Protein update by submitter FEATURES Qualifiers source /organism="Arabidopsis thaliana" /mol_type="genomic DNA" /db_xref="taxon:3702" /chromosome="4" /ecotype="Columbia" protein /gene="PUM6" /locus_tag="AT4G25880" /gene_synonym="APUM6" /gene_synonym="F14M19.160" /gene_synonym="F14M19_160" /gene_synonym="pumilio 6" /inference="Similar to RNA sequence, EST:INSD:ES206257.1,INSD:AV528109.1,INSD:AV782452.1, INSD:BP804752.1,INSD:BP571441.1,INSD:AV523596.1, INSD:AV816996.1,INSD:BP564825.1,INSD:BP599676.1, INSD:EL069224.1,INSD:AV799006.1,INSD:EL186693.1, INSD:AV528227.1,INSD:EL016582.1,INSD:BP572506.1, INSD:ES163760.1,INSD:AV529303.1,INSD:BP564649.1, INSD:ES172859.1,INSD:AV831819.1,INSD:BU636414.1, INSD:BP600187.1,INSD:BP582859.1,INSD:EL187348.1, INSD:BP609824.1,INSD:BP613927.1,INSD:EL175702.1, INSD:BP614231.1,INSD:EG423889.1,INSD:EG423887.1, INSD:EH979550.1,INSD:AA597645.1,INSD:EH845877.1, INSD:BP805538.1,INSD:EL152796.1,INSD:BP613614.1, INSD:EG485812.1,INSD:BP568268.1,INSD:BP583546.1, INSD:EH846275.1,INSD:BP816287.1,INSD:EH918619.1, INSD:EL238207.1,INSD:AV799012.1,INSD:EH950198.1, INSD:BP564101.1,INSD:BP791105.1,INSD:BP578892.1, INSD:BP579125.1,INSD:EH929479.1,INSD:EL998906.1, INSD:EL220986.1,INSD:EG438728.1,INSD:BP583263.1, INSD:EH867887.1,INSD:AV522786.1,INSD:BP579448.1, INSD:EG438727.1,INSD:ES142371.1,INSD:BP640401.1, INSD:AV793582.1,INSD:BP619136.1,INSD:EL068795.1, INSD:BP611998.1,INSD:BP787995.1,INSD:EH876656.1, INSD:AV827690.1,INSD:EL029385.1,INSD:EL012623.1, INSD:EL136215.1,INSD:ES142384.1,INSD:EL127392.1, INSD:ES038286.1,INSD:AV528308.1" /inference="Similar to RNA sequence, mRNA:INSD:AY133866.1,INSD:BX826676.1,INSD:AF360298.1" /note="pumilio 6 (PUM6); FUNCTIONS IN: RNA binding, binding; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pumilio RNA-binding repeat (InterPro:IPR001313), Armadillo-like helical (InterPro:IPR011989), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: pumilio 5 (TAIR:AT3G20250.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink)." /db_xref="TAIR:AT4G25880" /db_xref="Araport:AT4G25880" intron_pos 166:0 (1/8) intron_pos 541:2 (2/8) intron_pos 589:0 (3/8) intron_pos 625:0 (4/8) intron_pos 696:0 (5/8) intron_pos 733:0 (6/8) intron_pos 798:0 (7/8) intron_pos 855:1 (8/8) BEGIN 1 MATENPIRIS GSNERWSNSR KVSVPNRSGS APPNMEGSFL AVDNLLSRQG GSVYNNLMLP 61 RYGFEEPVTT HPSSKHSLNR IPSPPIYYPT EYQFIDNRVG RFRSNQGLNK VNSPIHLSQG 121 KLSTHKEVSE DESSQQLSVN SVSDRTDGLD IRLSPGSQSL ADFRQDDTSS GQTPQHSRSN 181 SSNGEVNTAD ESGNFSELSD DVVVKDNAAS TARASIGNEK SPDESTIISK MKSTNISGPG 241 TAKYPREPRY GQPERQPHQQ QNNATWIQGG SNMGSHGVND AVIGAGQFHY GQPYKFSGDG 301 QPVLQSSGFT PPLLYTATQT AYMTSPAHVY NMQSPAVYSP QYGYGPYTNM IPQFMPGYPS 361 HGSVPVVVSP DFIPQLSGPS AGSVVHGGEM QYAEKLYVPP GQPSFPDPMY MQYCQQSFGQ 421 MEPLAPRNHT NAPESQKDDP KFLRQIRGPS NSNMARPGMG VNYYGIQPNM GIMVQYLPTH 481 LGPPLSPGHV PYVEAYPGWQ PQGSLEGANG PRLCNFLEEL KSGKGRRFDL SDITGHIVEF 541 SADQHGSRFI QQKLENCKPE EKAAVFREIL PHACKLMTDV FGNYVIQKFF EYGNSTQRKE 601 LADQLMGQIV PLSLQMYGCR VIQKALDVIE PDQRVRLARE LDGQVMRCVR DQNGNHVIQK 661 CIENIPADKV GFMLYAFRGQ VSSLSMHPYG CRVIQRLLER CSHDHQCRFI TEEILESVCV 721 LSKDQYGNYV TQHVLEKGTS EERERIGRKL SGHIVQLSLH KFASNVIEKC LEYGGRVERD 781 LIIKEIAGPD ESYNSLLMMM KDQYGNYVVQ KIFETCTADQ RLTLFSRVRM HASALKKYTY 841 GKHIVSRLEQ PSIEENQELR R //