LOCUS AEE85069.1 317 aa PRT PLN 23-MAR-2023 DEFINITION Arabidopsis thaliana arginine/serine-rich splicing factor 35 protein. ACCESSION CP002687-4583 PROTEIN_ID AEE85069.1 SOURCE Arabidopsis thaliana (thale cress) ORGANISM Arabidopsis thaliana Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis. REFERENCE 1 (bases 1 to 18585056) AUTHORS Mayer,K., Schuller,C., Wambutt,R., Murphy,G., Volckaert,G., Pohl,T., Dusterhoft,A., Stiekema,W., Entian,K.D., Terryn,N., Harris,B., Ansorge,W., Brandt,P., Grivell,L., Rieger,M., Weichselgartner,M., de Simone,V., Obermaier,B., Mache,R., Muller,M., Kreis,M., Delseny,M., Puigdomenech,P., Watson,M., Schmidtheini,T., Reichert,B., Portatelle,D., Perez-Alonso,M., Boutry,M., Bancroft,I., Vos,P., Hoheisel,J., Zimmermann,W., Wedler,H., Ridley,P., Langham,S.A., McCullagh,B., Bilham,L., Robben,J., Van der Schueren,J., Grymonprez,B., Chuang,Y.J., Vandenbussche,F., Braeken,M., Weltjens,I., Voet,M., Bastiaens,I., Aert,R., Defoor,E., Weitzenegger,T., Bothe,G., Ramsperger,U., Hilbert,H., Braun,M., Holzer,E., Brandt,A., Peters,S., van Staveren,M., Dirske,W., Mooijman,P., Klein Lankhorst,R., Rose,M., Hauf,J., Kotter,P., Berneiser,S., Hempel,S., Feldpausch,M., Lamberth,S., Van den Daele,H., De Keyser,A., Buysshaert,C., Gielen,J., Villarroel,R., De Clercq,R., Van Montagu,M., Rogers,J., Cronin,A., Quail,M., Bray-Allen,S., Clark,L., Doggett,J., Hall,S., Kay,M., Lennard,N., McLay,K., Mayes,R., Pettett,A., Rajandream,M.A., Lyne,M., Benes,V., Rechmann,S., Borkova,D., Blocker,H., Scharfe,M., Grimm,M., Lohnert,T.H., Dose,S., de Haan,M., Maarse,A., Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Fartmann,B., Granderath,K., Dauner,D., Herzl,A., Neumann,S., Argiriou,A., Vitale,D., Liguori,R., Piravandi,E., Massenet,O., Quigley,F., Clabauld,G., Mundlein,A., Felber,R., Schnabl,S., Hiller,R., Schmidt,W., Lecharny,A., Aubourg,S., Chefdor,F., Cooke,R., Berger,C., Montfort,A., Casacuberta,E., Gibbons,T., Weber,N., Vandenbol,M., Bargues,M., Terol,J., Torres,A., Perez-Perez,A., Purnelle,B., Bent,E., Johnson,S., Tacon,D., Jesse,T., Heijnen,L., Schwarz,S., Scholler,P., Heber,S., Francs,P., Bielke,C., Frishman,D., Haase,D., Lemcke,K., Mewes,H.W., Stocker,S., Zaccaria,P., Bevan,M., Wilson,R.K., de la Bastide,M., Habermann,K., Parnell,L., Dedhia,N., Gnoj,L., Schutz,K., Huang,E., Spiegel,L., Sehkon,M., Murray,J., Sheet,P., Cordes,M., Abu-Threideh,J., Stoneking,T., Kalicki,J., Graves,T., Harmon,G., Edwards,J., Latreille,P., Courtney,L., Cloud,J., Abbott,A., Scott,K., Johnson,D., Minx,P., Bentley,D., Fulton,B., Miller,N., Greco,T., Kemp,K., Kramer,J., Fulton,L., Mardis,E., Dante,M., Pepin,K., Hillier,L., Nelson,J., Spieth,J., Ryan,E., Andrews,S., Geisel,C., Layman,D., Du,H., Ali,J., Berghoff,A., Jones,K., Drone,K., Cotton,M., Joshu,C., Antonoiu,B., Zidanic,M., Strong,C., Sun,H., Lamar,B., Yordan,C., Ma,P., Zhong,J., Preston,R., Vil,D., Shekher,M., Matero,A., Shah,R., Swaby,I.K., O'Shaughnessy,A., Rodriguez,M., Hoffmann,J., Till,S., Granat,S., Shohdy,N., Hasegawa,A., Hameed,A., Lodhi,M., Johnson,A., Chen,E., Marra,M., Martienssen,R. and McCombie,W.R. TITLE Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana JOURNAL Nature 402 (6763), 769-777 (1999) PUBMED 10617198 REFERENCE 2 (bases 1 to 18585056) AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E. CONSRTM TAIR TITLE Direct Submission JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie Institution, 260 Panama Street, Stanford, CA, USA REFERENCE 3 (bases 1 to 18585056) AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M., Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R., Vaughn,M. and Town,C.D. TITLE Direct Submission JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute, 9704 Medical Center Dr, Rockville, MD 20850, USA REMARK Protein update by submitter FEATURES Qualifiers source /organism="Arabidopsis thaliana" /mol_type="genomic DNA" /db_xref="taxon:3702" /chromosome="4" /ecotype="Columbia" protein /gene="RS40" /locus_tag="AT4G25500" /gene_synonym="ARABIDOPSIS THALIANA ARGININE/SERINE-RICH SPLICING FACTOR 35" /gene_synonym="ARGININE/SERINE-RICH SPLICING FACTOR" /gene_synonym="arginine/serine-rich splicing factor 35" /gene_synonym="arginine/serine-rich splicing factor 40" /gene_synonym="At-RS40" /gene_synonym="AT-SRP40" /gene_synonym="ATRSP35" /gene_synonym="ATRSP40" /gene_synonym="RSP35" /gene_synonym="SPLICING FACTOR AT-SRP40" /gene_synonym="T30C3.9" /inference="Similar to RNA sequence, EST:INSD:BP624537.1,INSD:DR380094.1,INSD:DR296172.1, INSD:EH957481.1,INSD:AA713267.1,INSD:EG517882.1, INSD:BP855272.1,INSD:BP657629.1,INSD:EH851458.1, INSD:EG521017.1,INSD:EL219826.1,INSD:EG517881.1, INSD:BP641618.1,INSD:EG527328.1,INSD:DR296171.1, INSD:EG521018.1,INSD:EG527179.1,INSD:BP659748.1, INSD:DR296170.1,INSD:BP623631.1,INSD:EL091390.1, INSD:AV553605.1,INSD:BP635287.1,INSD:ES181907.1, INSD:DR296175.1,INSD:DR363791.1,INSD:T22496.1, INSD:EL153456.1,INSD:DR296174.1,INSD:EL085958.1, INSD:EL098212.1,INSD:BP638496.1,INSD:EH857014.1, INSD:ES023930.1,INSD:DR296173.1,INSD:BP809954.1, INSD:ES124391.1,INSD:ES012094.1,INSD:AV781885.1, INSD:BP668110.1,INSD:EL990638.1,INSD:BP633340.1, INSD:BP644466.1,INSD:ES035250.1" /note="arginine/serine-rich splicing factor 35 (RSP35); FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: nuclear mRNA splicing, via spliceosome, RNA splicing; LOCATED IN: nuclear speck, spliceosomal complex; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT5G52040.4); Has 12133 Blast hits to 9335 proteins in 376 species: Archae - 0; Bacteria - 104; Metazoa - 8049; Fungi - 1339; Plants - 1578; Viruses - 48; Other Eukaryotes - 1015 (source: NCBI BLink)." /db_xref="TAIR:AT4G25500" /db_xref="Araport:AT4G25500" intron_pos 3:1 (1/4) intron_pos 41:0 (2/4) intron_pos 121:2 (3/4) intron_pos 307:2 (4/4) BEGIN 1 MQGFAFVYME DERDAEDAIR ALDRFEFGRK GRRLRVEWTK SERGGDKRSG GGSRRSSSSM 61 RPSKTLFVIN FDADNTRTRD LEKHFEPYGK IVNVRIRRNF AFIQYEAQED ATRALDASNN 121 SKLMDKVISV EYAVKDDDAR GNGHSPERRR DRSPERRRRS PSPYKRERGS PDYGRGASPV 181 AAYRKERTSP DYGRRRSPSP YKKSRRGSPE YGRDRRGNDS PRRRERVASP TKYSRSPNNK 241 RERMSPNHSP FKKESPRNGV GEVESPIERR ERSRSSPENG QVESPGSIGR RDSDGGYDGA 301 ESPMQKSRSP RSPPADE //