LOCUS AEE84188.1 1034 aa PRT PLN 23-MAR-2023 DEFINITION Arabidopsis thaliana VPS54 protein. ACCESSION CP002687-3353 PROTEIN_ID AEE84188.1 SOURCE Arabidopsis thaliana (thale cress) ORGANISM Arabidopsis thaliana Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis. REFERENCE 1 (bases 1 to 18585056) AUTHORS Mayer,K., Schuller,C., Wambutt,R., Murphy,G., Volckaert,G., Pohl,T., Dusterhoft,A., Stiekema,W., Entian,K.D., Terryn,N., Harris,B., Ansorge,W., Brandt,P., Grivell,L., Rieger,M., Weichselgartner,M., de Simone,V., Obermaier,B., Mache,R., Muller,M., Kreis,M., Delseny,M., Puigdomenech,P., Watson,M., Schmidtheini,T., Reichert,B., Portatelle,D., Perez-Alonso,M., Boutry,M., Bancroft,I., Vos,P., Hoheisel,J., Zimmermann,W., Wedler,H., Ridley,P., Langham,S.A., McCullagh,B., Bilham,L., Robben,J., Van der Schueren,J., Grymonprez,B., Chuang,Y.J., Vandenbussche,F., Braeken,M., Weltjens,I., Voet,M., Bastiaens,I., Aert,R., Defoor,E., Weitzenegger,T., Bothe,G., Ramsperger,U., Hilbert,H., Braun,M., Holzer,E., Brandt,A., Peters,S., van Staveren,M., Dirske,W., Mooijman,P., Klein Lankhorst,R., Rose,M., Hauf,J., Kotter,P., Berneiser,S., Hempel,S., Feldpausch,M., Lamberth,S., Van den Daele,H., De Keyser,A., Buysshaert,C., Gielen,J., Villarroel,R., De Clercq,R., Van Montagu,M., Rogers,J., Cronin,A., Quail,M., Bray-Allen,S., Clark,L., Doggett,J., Hall,S., Kay,M., Lennard,N., McLay,K., Mayes,R., Pettett,A., Rajandream,M.A., Lyne,M., Benes,V., Rechmann,S., Borkova,D., Blocker,H., Scharfe,M., Grimm,M., Lohnert,T.H., Dose,S., de Haan,M., Maarse,A., Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Fartmann,B., Granderath,K., Dauner,D., Herzl,A., Neumann,S., Argiriou,A., Vitale,D., Liguori,R., Piravandi,E., Massenet,O., Quigley,F., Clabauld,G., Mundlein,A., Felber,R., Schnabl,S., Hiller,R., Schmidt,W., Lecharny,A., Aubourg,S., Chefdor,F., Cooke,R., Berger,C., Montfort,A., Casacuberta,E., Gibbons,T., Weber,N., Vandenbol,M., Bargues,M., Terol,J., Torres,A., Perez-Perez,A., Purnelle,B., Bent,E., Johnson,S., Tacon,D., Jesse,T., Heijnen,L., Schwarz,S., Scholler,P., Heber,S., Francs,P., Bielke,C., Frishman,D., Haase,D., Lemcke,K., Mewes,H.W., Stocker,S., Zaccaria,P., Bevan,M., Wilson,R.K., de la Bastide,M., Habermann,K., Parnell,L., Dedhia,N., Gnoj,L., Schutz,K., Huang,E., Spiegel,L., Sehkon,M., Murray,J., Sheet,P., Cordes,M., Abu-Threideh,J., Stoneking,T., Kalicki,J., Graves,T., Harmon,G., Edwards,J., Latreille,P., Courtney,L., Cloud,J., Abbott,A., Scott,K., Johnson,D., Minx,P., Bentley,D., Fulton,B., Miller,N., Greco,T., Kemp,K., Kramer,J., Fulton,L., Mardis,E., Dante,M., Pepin,K., Hillier,L., Nelson,J., Spieth,J., Ryan,E., Andrews,S., Geisel,C., Layman,D., Du,H., Ali,J., Berghoff,A., Jones,K., Drone,K., Cotton,M., Joshu,C., Antonoiu,B., Zidanic,M., Strong,C., Sun,H., Lamar,B., Yordan,C., Ma,P., Zhong,J., Preston,R., Vil,D., Shekher,M., Matero,A., Shah,R., Swaby,I.K., O'Shaughnessy,A., Rodriguez,M., Hoffmann,J., Till,S., Granat,S., Shohdy,N., Hasegawa,A., Hameed,A., Lodhi,M., Johnson,A., Chen,E., Marra,M., Martienssen,R. and McCombie,W.R. TITLE Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana JOURNAL Nature 402 (6763), 769-777 (1999) PUBMED 10617198 REFERENCE 2 (bases 1 to 18585056) AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E. CONSRTM TAIR TITLE Direct Submission JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie Institution, 260 Panama Street, Stanford, CA, USA REFERENCE 3 (bases 1 to 18585056) AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M., Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R., Vaughn,M. and Town,C.D. TITLE Direct Submission JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute, 9704 Medical Center Dr, Rockville, MD 20850, USA REMARK Protein update by submitter FEATURES Qualifiers source /organism="Arabidopsis thaliana" /mol_type="genomic DNA" /db_xref="taxon:3702" /chromosome="4" /ecotype="Columbia" protein /gene="VPS54" /locus_tag="AT4G19490" /gene_synonym="ARABIDOPSIS THALIANA VPS54 HOMOLOG" /gene_synonym="ATVPS54" /gene_synonym="F24J7.50" /gene_synonym="F24J7_50" /inference="Similar to RNA sequence, EST:INSD:AV548345.1,INSD:EL220233.1,INSD:AV523622.1, INSD:EH915080.1,INSD:EG517871.1,INSD:EH818738.1, INSD:BP621360.1,INSD:ES181166.1,INSD:AV528559.1, INSD:BP591583.1,INSD:AV806372.1,INSD:AV548254.1, INSD:AV830391.1,INSD:AV528469.1,INSD:AV529340.1, INSD:EH946323.1,INSD:EH897582.1,INSD:EL030630.1, INSD:EG513993.1,INSD:ES101936.1,INSD:BP811179.1, INSD:EG517870.1,INSD:AV523130.1,INSD:EH829225.1, INSD:BP605504.1,INSD:EL085906.1,INSD:EL281285.1" /inference="Similar to RNA sequence, mRNA:INSD:AY093762.1" /note="VPS54; INVOLVED IN: retrograde transport, endosome to Golgi; LOCATED IN: chloroplast; EXPRESSED IN: male gametophyte; EXPRESSED DURING: L mature pollen stage; CONTAINS InterPro DOMAIN/s: Vacuolar protein sorting-associated protein 54 (InterPro:IPR019515), Vps54-like (InterPro:IPR012501); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink)." /db_xref="TAIR:AT4G19490" /db_xref="Araport:AT4G19490" intron_pos 279:0 (1/17) intron_pos 300:0 (2/17) intron_pos 326:2 (3/17) intron_pos 367:0 (4/17) intron_pos 392:0 (5/17) intron_pos 443:1 (6/17) intron_pos 473:0 (7/17) intron_pos 558:2 (8/17) intron_pos 616:0 (9/17) intron_pos 644:0 (10/17) intron_pos 777:2 (11/17) intron_pos 829:0 (12/17) intron_pos 856:1 (13/17) intron_pos 883:0 (14/17) intron_pos 937:0 (15/17) intron_pos 959:2 (16/17) intron_pos 986:2 (17/17) BEGIN 1 MDSHPSLMGR SITNSNRSSL DLGRPSSSSS SSPSPLTKSI SDASSQSLSS ILNNPHGGKS 61 GVYGSDASWV GWWSSSTFVA PAEFAPVAST KLPGSELTRS DFHGYVSSIS ESHGRFEDIR 121 KHTREESCGF DQESHVSGLA ACLREVPSLY FKEDFALEDG ATFRSACPFS SLNENLALQE 181 KLSQYLDVVE LHLVKEISVR SDSFFEAQGQ LQDLNVKIVE GCSRIRELKE TIRLLDRNLV 241 DSARQIQELS STRINMLELQ RKLRLILYVN QALSALKLLV ASADCAGALD ITDDLQNLLA 301 GDELTGLYCF RHLRDHVTSS IDSINSILTS EFMRISIHDT GEIDVLILSA ANIRGSISSN 361 GNTGEEVKLE EEDTSTLCDR LLPLVIGLLR TAKFPSILRM YRDTLTSEMK NAIKKAVADL 421 LPILVARSLE SDFSHGERSV DDGGGLSLAS KLRTLSSEAF VNLLTAIFKI VQAHLVRASE 481 VKKAIEWILC NIDGHYAADS VAAAIAVGAV AAETAQEIGF QGGSLVSSPL GKATSKAPPL 541 QGKSSDASSL MNMSRNFRAD VLRENTEAVF AACEVTHGRW AKLLGVRALL HPKLKLQEFM 601 SIYDLTQEFI TSTEKIGGRL GSSIRGTLQS QAKAFVDSQH ESRMTKLKAV LDQETWDEID 661 VPEEFQSIIS SLFASQRLIS GKVDDADLNS YHSNRLPLNG SLTSGSGDQN SELRNEKSES 721 SEGSVVSDAQ VKPTVSPESL ERSKAGVSSA TNNQSNQKAH GKSNLFYQGV GYHMVNCGLI 781 LLKMLSEYID MNNSLPALSS EIVLRVVEVL RFFNTRTCQL VLGAGAMQVS GLKSIKAKHL 841 ALASQVIDFT YTIIPETRRI LFSKVPETRK PLLSVEIDKV AQDFRIHRDE IYTKLVQIMR 901 ERLLAHLHGL PKVVEGWNRP PDTNKQTKEF AWPLTREVGY LHRVLSETLH EADVQAIFRQ 961 VISIIHTQTS QTLTNLEISS TEAKKRLKLH VELILKCIRS LPSDNANQSD IPNWGQLDEF 1021 FAEHFREEEA GEAE //