LOCUS AEE83344.1 471 aa PRT PLN 23-MAR-2023 DEFINITION Arabidopsis thaliana serine hydroxymethyltransferase 4 protein. ACCESSION CP002687-2118 PROTEIN_ID AEE83344.1 SOURCE Arabidopsis thaliana (thale cress) ORGANISM Arabidopsis thaliana Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis. REFERENCE 1 (bases 1 to 18585056) AUTHORS Mayer,K., Schuller,C., Wambutt,R., Murphy,G., Volckaert,G., Pohl,T., Dusterhoft,A., Stiekema,W., Entian,K.D., Terryn,N., Harris,B., Ansorge,W., Brandt,P., Grivell,L., Rieger,M., Weichselgartner,M., de Simone,V., Obermaier,B., Mache,R., Muller,M., Kreis,M., Delseny,M., Puigdomenech,P., Watson,M., Schmidtheini,T., Reichert,B., Portatelle,D., Perez-Alonso,M., Boutry,M., Bancroft,I., Vos,P., Hoheisel,J., Zimmermann,W., Wedler,H., Ridley,P., Langham,S.A., McCullagh,B., Bilham,L., Robben,J., Van der Schueren,J., Grymonprez,B., Chuang,Y.J., Vandenbussche,F., Braeken,M., Weltjens,I., Voet,M., Bastiaens,I., Aert,R., Defoor,E., Weitzenegger,T., Bothe,G., Ramsperger,U., Hilbert,H., Braun,M., Holzer,E., Brandt,A., Peters,S., van Staveren,M., Dirske,W., Mooijman,P., Klein Lankhorst,R., Rose,M., Hauf,J., Kotter,P., Berneiser,S., Hempel,S., Feldpausch,M., Lamberth,S., Van den Daele,H., De Keyser,A., Buysshaert,C., Gielen,J., Villarroel,R., De Clercq,R., Van Montagu,M., Rogers,J., Cronin,A., Quail,M., Bray-Allen,S., Clark,L., Doggett,J., Hall,S., Kay,M., Lennard,N., McLay,K., Mayes,R., Pettett,A., Rajandream,M.A., Lyne,M., Benes,V., Rechmann,S., Borkova,D., Blocker,H., Scharfe,M., Grimm,M., Lohnert,T.H., Dose,S., de Haan,M., Maarse,A., Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Fartmann,B., Granderath,K., Dauner,D., Herzl,A., Neumann,S., Argiriou,A., Vitale,D., Liguori,R., Piravandi,E., Massenet,O., Quigley,F., Clabauld,G., Mundlein,A., Felber,R., Schnabl,S., Hiller,R., Schmidt,W., Lecharny,A., Aubourg,S., Chefdor,F., Cooke,R., Berger,C., Montfort,A., Casacuberta,E., Gibbons,T., Weber,N., Vandenbol,M., Bargues,M., Terol,J., Torres,A., Perez-Perez,A., Purnelle,B., Bent,E., Johnson,S., Tacon,D., Jesse,T., Heijnen,L., Schwarz,S., Scholler,P., Heber,S., Francs,P., Bielke,C., Frishman,D., Haase,D., Lemcke,K., Mewes,H.W., Stocker,S., Zaccaria,P., Bevan,M., Wilson,R.K., de la Bastide,M., Habermann,K., Parnell,L., Dedhia,N., Gnoj,L., Schutz,K., Huang,E., Spiegel,L., Sehkon,M., Murray,J., Sheet,P., Cordes,M., Abu-Threideh,J., Stoneking,T., Kalicki,J., Graves,T., Harmon,G., Edwards,J., Latreille,P., Courtney,L., Cloud,J., Abbott,A., Scott,K., Johnson,D., Minx,P., Bentley,D., Fulton,B., Miller,N., Greco,T., Kemp,K., Kramer,J., Fulton,L., Mardis,E., Dante,M., Pepin,K., Hillier,L., Nelson,J., Spieth,J., Ryan,E., Andrews,S., Geisel,C., Layman,D., Du,H., Ali,J., Berghoff,A., Jones,K., Drone,K., Cotton,M., Joshu,C., Antonoiu,B., Zidanic,M., Strong,C., Sun,H., Lamar,B., Yordan,C., Ma,P., Zhong,J., Preston,R., Vil,D., Shekher,M., Matero,A., Shah,R., Swaby,I.K., O'Shaughnessy,A., Rodriguez,M., Hoffmann,J., Till,S., Granat,S., Shohdy,N., Hasegawa,A., Hameed,A., Lodhi,M., Johnson,A., Chen,E., Marra,M., Martienssen,R. and McCombie,W.R. TITLE Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana JOURNAL Nature 402 (6763), 769-777 (1999) PUBMED 10617198 REFERENCE 2 (bases 1 to 18585056) AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E. CONSRTM TAIR TITLE Direct Submission JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie Institution, 260 Panama Street, Stanford, CA, USA REFERENCE 3 (bases 1 to 18585056) AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M., Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R., Vaughn,M. and Town,C.D. TITLE Direct Submission JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute, 9704 Medical Center Dr, Rockville, MD 20850, USA REMARK Protein update by submitter FEATURES Qualifiers source /organism="Arabidopsis thaliana" /mol_type="genomic DNA" /db_xref="taxon:3702" /chromosome="4" /ecotype="Columbia" protein /gene="SHM4" /locus_tag="AT4G13930" /gene_synonym="DL3005C" /gene_synonym="FCAALL.160" /gene_synonym="serine hydroxymethyltransferase 4" /gene_synonym="SERINE HYDROXYMETHYLTRANSFERASE 4" /inference="Similar to RNA sequence, EST:INSD:BP839036.1,INSD:AV564129.1,INSD:AV520660.1, INSD:T88604.1,INSD:AV552501.1,INSD:DR265244.1, INSD:BP840698.1,INSD:AV537597.1,INSD:AV560659.1, INSD:EH860829.1,INSD:EL216575.1,INSD:AV552568.1, INSD:DR265243.1,INSD:AV562431.1,INSD:BU635962.1, INSD:AV527069.1,INSD:EL264214.1,INSD:BP795110.1, INSD:EH924780.1,INSD:BP779620.1,INSD:BE527976.1, INSD:EH795617.1,INSD:AV809333.1,INSD:BP860621.1, INSD:BP569902.1,INSD:BE528985.1,INSD:EH882595.1, INSD:AV566000.1,INSD:ES050823.1,INSD:BE521881.1, INSD:AV518569.1,INSD:ES081238.1,INSD:DR265246.1, INSD:BE524203.1,INSD:AV818086.1,INSD:AV520657.1, INSD:AV521346.1,INSD:EL033401.1,INSD:BE530619.1, INSD:AV542626.1,INSD:BP793457.1,INSD:AV525960.1, INSD:BP561597.1,INSD:EH921507.1,INSD:EL256089.1, INSD:AV543200.1,INSD:AV525920.1,INSD:ES009081.1, INSD:AV560713.1,INSD:CF773304.1,INSD:BP785127.1, INSD:BP786015.1,INSD:AV795902.1,INSD:BE525787.1, INSD:BE521880.1,INSD:EL185993.1,INSD:BE524669.1, INSD:AI100508.1,INSD:CB263148.1,INSD:EH830616.1, INSD:BX835667.1,INSD:AV549565.1,INSD:EH821127.1, INSD:ES140531.1,INSD:AV535248.1,INSD:EL124859.1, INSD:BE524049.1,INSD:AI099614.1,INSD:AV551293.1, INSD:CB259363.1,INSD:ES095128.1,INSD:BP793791.1, INSD:EL149876.1,INSD:BE526594.1,INSD:DR265242.1, INSD:BP795092.1,INSD:AV544032.1,INSD:BP573930.1, INSD:EL031362.1,INSD:ES065314.1,INSD:BP572799.1, INSD:EL207311.1,INSD:AV566763.1,INSD:AV793658.1, INSD:AV540946.1,INSD:AV553579.1,INSD:AV552152.1, INSD:AV828075.1,INSD:AV792895.1,INSD:DR265245.1, INSD:H76599.1,INSD:AV547190.1,INSD:BP864323.1, INSD:BP786308.1,INSD:EL269315.1,INSD:DR265250.1, INSD:EH822114.1,INSD:AV533310.1,INSD:H35954.1, INSD:BP652805.1,INSD:ES122676.1,INSD:BE527113.1, INSD:BE520284.1,INSD:EG419562.1,INSD:AV553304.1, INSD:BP803504.1,INSD:EH804472.1,INSD:EL240976.1, INSD:AV519950.1,INSD:EL980879.1,INSD:BP814787.1, INSD:BP824047.1,INSD:BP661615.1,INSD:AV791094.1, INSD:AV817794.1,INSD:EH907804.1,INSD:EL171175.1, INSD:AV518595.1,INSD:ES049478.1,INSD:BP780510.1, INSD:AV562634.1,INSD:ES034981.1,INSD:BP868904.1, INSD:BP570784.1,INSD:R65281.1,INSD:BE523218.1, INSD:DR265249.1,INSD:AI992858.1,INSD:AV544100.1, INSD:BP786871.1,INSD:BP652438.1,INSD:CB258723.1, INSD:EH878706.1,INSD:BP637816.1,INSD:BP652764.1, INSD:EL285294.1,INSD:AV546961.1,INSD:EL110573.1, INSD:DR265248.1,INSD:ES105397.1,INSD:EL264115.1, INSD:CF652457.1,INSD:AV799813.1,INSD:AV521102.1, INSD:AV539391.1,INSD:ES134940.1,INSD:ES089747.1, INSD:BP794013.1,INSD:Z24502.1,INSD:BP648011.1, INSD:BP846201.1,INSD:CA781687.1,INSD:BX839547.1, INSD:AV566297.1,INSD:AA067442.1,INSD:DR374514.1, INSD:AV564431.1,INSD:BP640437.1,INSD:EH849777.1, INSD:DR265247.1,INSD:AV532935.1,INSD:EL970679.1, INSD:EH804620.1,INSD:AV793808.1,INSD:EH931734.1, INSD:BP587890.1,INSD:AV538298.1,INSD:BE522632.1, INSD:BP639121.1,INSD:EH885890.1,INSD:BP861500.2, INSD:BP848034.1,INSD:AV542629.1,INSD:AI099636.1, INSD:CK118222.1,INSD:AV540834.1,INSD:CK118362.1, INSD:BP789034.1,INSD:BP562052.2,INSD:AV550503.1, INSD:BE527615.1,INSD:AV805929.1,INSD:ES002278.1, INSD:AV829940.1,INSD:EH939167.1,INSD:BP789393.1, INSD:T46523.1,INSD:BP784391.1,INSD:EH946190.1, INSD:AV542030.1,INSD:BP783414.1,INSD:BP792279.1, INSD:BP784562.1,INSD:AV535180.1,INSD:BP792203.1, INSD:AV540548.1,INSD:BP595227.1,INSD:AV518139.1, INSD:BE520283.1,INSD:CB252221.1,INSD:EH901019.1, INSD:EL060321.1,INSD:EH838902.1,INSD:AV797318.1, INSD:BP783488.1,INSD:F14104.1,INSD:DR265251.1, INSD:AV524741.1,INSD:BP580448.1,INSD:BP782883.1, INSD:AV559067.1,INSD:BX839226.1,INSD:AV527756.1, INSD:ES026822.1,INSD:DR265240.1,INSD:AV544353.1, INSD:EH992227.1,INSD:BP647610.1,INSD:T88275.1, INSD:BP781996.1,INSD:DR265252.1,INSD:N96405.1, INSD:EH944301.1,INSD:DR265239.1,INSD:EH805105.1, INSD:BP825801.1,INSD:AV536042.1,INSD:ES167852.1, INSD:ES147498.1,INSD:EL331640.1,INSD:BP574362.1, INSD:AV827131.1,INSD:BP786530.1,INSD:BP564524.1, INSD:DR265241.1,INSD:AV560680.1,INSD:BP821766.1, INSD:EL155132.1" /inference="Similar to RNA sequence, mRNA:INSD:BX827403.1,INSD:AF324991.2,INSD:AK220902.1, INSD:AY086929.1,INSD:AF361589.1,INSD:AY093987.1" /note="serine hydroxymethyltransferase 4 (SHM4); FUNCTIONS IN: pyridoxal phosphate binding, glycine hydroxymethyltransferase activity, catalytic activity; INVOLVED IN: response to cadmium ion, glycine metabolic process, L-serine metabolic process; LOCATED IN: cytosol, plasma membrane, membrane; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: seedling growth, seed development stages; CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Serine hydroxymethyltransferase, pyridoxal phosphate binding site (InterPro:IPR019798), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421), Serine hydroxymethyltransferase (InterPro:IPR001085); BEST Arabidopsis thaliana protein match is: Pyridoxal phosphate (PLP)-dependent transferases superfamily protein (TAIR:AT4G13890.1); Has 11689 Blast hits to 11661 proteins in 2862 species: Archae - 259; Bacteria - 6437; Metazoa - 341; Fungi - 289; Plants - 375; Viruses - 6; Other Eukaryotes - 3982 (source: NCBI BLink)." /db_xref="TAIR:AT4G13930" /db_xref="Araport:AT4G13930" intron_pos 227:0 (1/3) intron_pos 357:1 (2/3) intron_pos 391:1 (3/3) BEGIN 1 MEPVSSWGNT SLVSVDPEIH DLIEKEKRRQ CRGIELIASE NFTSFAVIEA LGSALTNKYS 61 EGIPGNRYYG GNEFIDEIEN LCRSRALEAF HCDPAAWGVN VQPYSGSPAN FAAYTALLQP 121 HDRIMGLDLP SGGHLTHGYY TSGGKKISAT SIYFESLPYK VNFTTGYIDY DKLEEKALDF 181 RPKLLICGGS AYPRDWDYAR FRAIADKVGA LLLCDMAHIS GLVAAQEAAN PFEYCDVVTT 241 TTHKSLRGPR AGMIFYRKGP KPPKKGQPEG AVYDFEDKIN FAVFPALQGG PHNHQIGALA 301 VALKQANTPG FKVYAKQVKA NAVALGNYLM SKGYQIVTNG TENHLVLWDL RPLGLTGNKV 361 EKLCDLCSIT LNKNAVFGDS SALAPGGVRI GAPAMTSRGL VEKDFEQIGE FLSRAVTLTL 421 DIQKTYGKLL KDFNKGLVNN KDLDQLKADV EKFSASYEMP GFLMSEMKYK D //