LOCUS AEE82900.1 923 aa PRT PLN 23-MAR-2023 DEFINITION Arabidopsis thaliana ubiquitin-specific protease 9 protein. ACCESSION CP002687-1480 PROTEIN_ID AEE82900.1 SOURCE Arabidopsis thaliana (thale cress) ORGANISM Arabidopsis thaliana Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis. REFERENCE 1 (bases 1 to 18585056) AUTHORS Mayer,K., Schuller,C., Wambutt,R., Murphy,G., Volckaert,G., Pohl,T., Dusterhoft,A., Stiekema,W., Entian,K.D., Terryn,N., Harris,B., Ansorge,W., Brandt,P., Grivell,L., Rieger,M., Weichselgartner,M., de Simone,V., Obermaier,B., Mache,R., Muller,M., Kreis,M., Delseny,M., Puigdomenech,P., Watson,M., Schmidtheini,T., Reichert,B., Portatelle,D., Perez-Alonso,M., Boutry,M., Bancroft,I., Vos,P., Hoheisel,J., Zimmermann,W., Wedler,H., Ridley,P., Langham,S.A., McCullagh,B., Bilham,L., Robben,J., Van der Schueren,J., Grymonprez,B., Chuang,Y.J., Vandenbussche,F., Braeken,M., Weltjens,I., Voet,M., Bastiaens,I., Aert,R., Defoor,E., Weitzenegger,T., Bothe,G., Ramsperger,U., Hilbert,H., Braun,M., Holzer,E., Brandt,A., Peters,S., van Staveren,M., Dirske,W., Mooijman,P., Klein Lankhorst,R., Rose,M., Hauf,J., Kotter,P., Berneiser,S., Hempel,S., Feldpausch,M., Lamberth,S., Van den Daele,H., De Keyser,A., Buysshaert,C., Gielen,J., Villarroel,R., De Clercq,R., Van Montagu,M., Rogers,J., Cronin,A., Quail,M., Bray-Allen,S., Clark,L., Doggett,J., Hall,S., Kay,M., Lennard,N., McLay,K., Mayes,R., Pettett,A., Rajandream,M.A., Lyne,M., Benes,V., Rechmann,S., Borkova,D., Blocker,H., Scharfe,M., Grimm,M., Lohnert,T.H., Dose,S., de Haan,M., Maarse,A., Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Fartmann,B., Granderath,K., Dauner,D., Herzl,A., Neumann,S., Argiriou,A., Vitale,D., Liguori,R., Piravandi,E., Massenet,O., Quigley,F., Clabauld,G., Mundlein,A., Felber,R., Schnabl,S., Hiller,R., Schmidt,W., Lecharny,A., Aubourg,S., Chefdor,F., Cooke,R., Berger,C., Montfort,A., Casacuberta,E., Gibbons,T., Weber,N., Vandenbol,M., Bargues,M., Terol,J., Torres,A., Perez-Perez,A., Purnelle,B., Bent,E., Johnson,S., Tacon,D., Jesse,T., Heijnen,L., Schwarz,S., Scholler,P., Heber,S., Francs,P., Bielke,C., Frishman,D., Haase,D., Lemcke,K., Mewes,H.W., Stocker,S., Zaccaria,P., Bevan,M., Wilson,R.K., de la Bastide,M., Habermann,K., Parnell,L., Dedhia,N., Gnoj,L., Schutz,K., Huang,E., Spiegel,L., Sehkon,M., Murray,J., Sheet,P., Cordes,M., Abu-Threideh,J., Stoneking,T., Kalicki,J., Graves,T., Harmon,G., Edwards,J., Latreille,P., Courtney,L., Cloud,J., Abbott,A., Scott,K., Johnson,D., Minx,P., Bentley,D., Fulton,B., Miller,N., Greco,T., Kemp,K., Kramer,J., Fulton,L., Mardis,E., Dante,M., Pepin,K., Hillier,L., Nelson,J., Spieth,J., Ryan,E., Andrews,S., Geisel,C., Layman,D., Du,H., Ali,J., Berghoff,A., Jones,K., Drone,K., Cotton,M., Joshu,C., Antonoiu,B., Zidanic,M., Strong,C., Sun,H., Lamar,B., Yordan,C., Ma,P., Zhong,J., Preston,R., Vil,D., Shekher,M., Matero,A., Shah,R., Swaby,I.K., O'Shaughnessy,A., Rodriguez,M., Hoffmann,J., Till,S., Granat,S., Shohdy,N., Hasegawa,A., Hameed,A., Lodhi,M., Johnson,A., Chen,E., Marra,M., Martienssen,R. and McCombie,W.R. TITLE Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana JOURNAL Nature 402 (6763), 769-777 (1999) PUBMED 10617198 REFERENCE 2 (bases 1 to 18585056) AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E. CONSRTM TAIR TITLE Direct Submission JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie Institution, 260 Panama Street, Stanford, CA, USA REFERENCE 3 (bases 1 to 18585056) AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M., Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R., Vaughn,M. and Town,C.D. TITLE Direct Submission JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute, 9704 Medical Center Dr, Rockville, MD 20850, USA REMARK Protein update by submitter FEATURES Qualifiers source /organism="Arabidopsis thaliana" /mol_type="genomic DNA" /db_xref="taxon:3702" /chromosome="4" /ecotype="Columbia" protein /gene="UBP9" /locus_tag="AT4G10570" /gene_synonym="T4F9.30" /gene_synonym="T4F9_30" /gene_synonym="ubiquitin-specific protease 9" /inference="Similar to RNA sequence, EST:INSD:EL148100.1,INSD:AV522745.1,INSD:EH985165.1, INSD:ES090004.1,INSD:BP563120.1,INSD:EH872007.1, INSD:EH916947.1,INSD:AV547287.1,INSD:AV528258.1, INSD:AU227547.1,INSD:EL147409.1,INSD:EL079897.1" /inference="Similar to RNA sequence, mRNA:INSD:BT004132.1" /note="ubiquitin-specific protease 9 (UBP9); FUNCTIONS IN: cysteine-type endopeptidase activity, ubiquitin thiolesterase activity; INVOLVED IN: ubiquitin-dependent protein catabolic process; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2, conserved site (InterPro:IPR018200), Peptidase C19, ubiquitin-specific peptidase, DUSP domain (InterPro:IPR006615), Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2 (InterPro:IPR001394); BEST Arabidopsis thaliana protein match is: ubiquitin-specific protease 10 (TAIR:AT4G10590.1); Has 11569 Blast hits to 7616 proteins in 265 species: Archae - 0; Bacteria - 6; Metazoa - 6024; Fungi - 1995; Plants - 1380; Viruses - 8; Other Eukaryotes - 2156 (source: NCBI BLink)." /db_xref="TAIR:AT4G10570" /db_xref="Araport:AT4G10570" intron_pos 51:2 (1/12) intron_pos 122:2 (2/12) intron_pos 171:0 (3/12) intron_pos 191:0 (4/12) intron_pos 224:0 (5/12) intron_pos 350:0 (6/12) intron_pos 397:0 (7/12) intron_pos 454:0 (8/12) intron_pos 540:0 (9/12) intron_pos 591:2 (10/12) intron_pos 769:2 (11/12) intron_pos 860:0 (12/12) BEGIN 1 MTIPNSDFML ENGVCDLPFT PEEEKRIVSE LTSESEDNLK QGNLYFVISK RWYTSWQEYV 61 ENSANECSTG ESSEAPRPGP IDNHDIIESD SDINDPQLRR LLVEGEDYVL VPKQVWKRLV 121 EWYSGGPPIE RKLICQGFYT RSYSVEVYPL CLMLTDGRDE SRTVIRLGKQ ASIRELYEKV 181 CAMTGVPQEK AHIWDYFDKR KNGLLDPLSY KSLEESSLHM DQDILVEVDG LSSSSQSAMS 241 STGNELALVP LEPSRSIVTI AGGPTLSNGH STTSNFSLFP RITSEDDGRD SLSILGKGEK 301 GGLAGLSNLG NTCFMNSALQ CLAHTPPIVE YFLQDYSDDI NRDNPLGMCG ELAIAFGDLL 361 KKLWSSGRNA VAPRAFKTKL ARFAPQFSGY NQHDSQELLA FLLDGLHEDL NKVKRKPYIE 421 LKDSDSRPDD EVAEELWNYH KARNDSVIVD VCQGQYKSTL VCPVCGKISI TFDPFMYLSV 481 PLPSTLTRSM TITVFYCDGS RLPMPYTVIV PKQGSIRDLI TALGTACCLA EDESLLLAEV 541 YDHKIFRYFE IPLDSLSAIK DDEHIVAYRL NQIPKGSRKA KLEILHGGQE RAVLDSVRGS 601 DVKLFGTPFV TYVNTEPLSG TDIDAVISGF LSPLHKVHAP SKIHNGSDNG HLADATVDQA 661 SGILSSPDTE IDNASDRELS FRIFLTDERG LNIKPLQSES SISPGTVTRV LVEWNEGEHE 721 RYDSSYLSDL PEVHKTSFSA KKTRQESISL FSCLEAFLAE EPLGPDDMWF CPSCKEHRQA 781 NKKLDLWKLP DILVFHLKRF TYSRYLKNKI DTFVNFPVHD LDLSKYVKNK NGQSYLYELY 841 AVSNHYGGLG GGHYTAYAKL IDDNKWYHFD DSHVSSVNES EIRNSAAYVL FYRRVRSETE 901 TQTAEMSTDM DYSCLNSHND KAS //