LOCUS AEE82716.1 244 aa PRT PLN 23-MAR-2023 DEFINITION Arabidopsis thaliana RNA-binding (RRM/RBD/RNP motifs) family protein protein. ACCESSION CP002687-1236 PROTEIN_ID AEE82716.1 SOURCE Arabidopsis thaliana (thale cress) ORGANISM Arabidopsis thaliana Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis. REFERENCE 1 (bases 1 to 18585056) AUTHORS Mayer,K., Schuller,C., Wambutt,R., Murphy,G., Volckaert,G., Pohl,T., Dusterhoft,A., Stiekema,W., Entian,K.D., Terryn,N., Harris,B., Ansorge,W., Brandt,P., Grivell,L., Rieger,M., Weichselgartner,M., de Simone,V., Obermaier,B., Mache,R., Muller,M., Kreis,M., Delseny,M., Puigdomenech,P., Watson,M., Schmidtheini,T., Reichert,B., Portatelle,D., Perez-Alonso,M., Boutry,M., Bancroft,I., Vos,P., Hoheisel,J., Zimmermann,W., Wedler,H., Ridley,P., Langham,S.A., McCullagh,B., Bilham,L., Robben,J., Van der Schueren,J., Grymonprez,B., Chuang,Y.J., Vandenbussche,F., Braeken,M., Weltjens,I., Voet,M., Bastiaens,I., Aert,R., Defoor,E., Weitzenegger,T., Bothe,G., Ramsperger,U., Hilbert,H., Braun,M., Holzer,E., Brandt,A., Peters,S., van Staveren,M., Dirske,W., Mooijman,P., Klein Lankhorst,R., Rose,M., Hauf,J., Kotter,P., Berneiser,S., Hempel,S., Feldpausch,M., Lamberth,S., Van den Daele,H., De Keyser,A., Buysshaert,C., Gielen,J., Villarroel,R., De Clercq,R., Van Montagu,M., Rogers,J., Cronin,A., Quail,M., Bray-Allen,S., Clark,L., Doggett,J., Hall,S., Kay,M., Lennard,N., McLay,K., Mayes,R., Pettett,A., Rajandream,M.A., Lyne,M., Benes,V., Rechmann,S., Borkova,D., Blocker,H., Scharfe,M., Grimm,M., Lohnert,T.H., Dose,S., de Haan,M., Maarse,A., Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Fartmann,B., Granderath,K., Dauner,D., Herzl,A., Neumann,S., Argiriou,A., Vitale,D., Liguori,R., Piravandi,E., Massenet,O., Quigley,F., Clabauld,G., Mundlein,A., Felber,R., Schnabl,S., Hiller,R., Schmidt,W., Lecharny,A., Aubourg,S., Chefdor,F., Cooke,R., Berger,C., Montfort,A., Casacuberta,E., Gibbons,T., Weber,N., Vandenbol,M., Bargues,M., Terol,J., Torres,A., Perez-Perez,A., Purnelle,B., Bent,E., Johnson,S., Tacon,D., Jesse,T., Heijnen,L., Schwarz,S., Scholler,P., Heber,S., Francs,P., Bielke,C., Frishman,D., Haase,D., Lemcke,K., Mewes,H.W., Stocker,S., Zaccaria,P., Bevan,M., Wilson,R.K., de la Bastide,M., Habermann,K., Parnell,L., Dedhia,N., Gnoj,L., Schutz,K., Huang,E., Spiegel,L., Sehkon,M., Murray,J., Sheet,P., Cordes,M., Abu-Threideh,J., Stoneking,T., Kalicki,J., Graves,T., Harmon,G., Edwards,J., Latreille,P., Courtney,L., Cloud,J., Abbott,A., Scott,K., Johnson,D., Minx,P., Bentley,D., Fulton,B., Miller,N., Greco,T., Kemp,K., Kramer,J., Fulton,L., Mardis,E., Dante,M., Pepin,K., Hillier,L., Nelson,J., Spieth,J., Ryan,E., Andrews,S., Geisel,C., Layman,D., Du,H., Ali,J., Berghoff,A., Jones,K., Drone,K., Cotton,M., Joshu,C., Antonoiu,B., Zidanic,M., Strong,C., Sun,H., Lamar,B., Yordan,C., Ma,P., Zhong,J., Preston,R., Vil,D., Shekher,M., Matero,A., Shah,R., Swaby,I.K., O'Shaughnessy,A., Rodriguez,M., Hoffmann,J., Till,S., Granat,S., Shohdy,N., Hasegawa,A., Hameed,A., Lodhi,M., Johnson,A., Chen,E., Marra,M., Martienssen,R. and McCombie,W.R. TITLE Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana JOURNAL Nature 402 (6763), 769-777 (1999) PUBMED 10617198 REFERENCE 2 (bases 1 to 18585056) AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E. CONSRTM TAIR TITLE Direct Submission JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie Institution, 260 Panama Street, Stanford, CA, USA REFERENCE 3 (bases 1 to 18585056) AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M., Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R., Vaughn,M. and Town,C.D. TITLE Direct Submission JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute, 9704 Medical Center Dr, Rockville, MD 20850, USA REMARK Protein update by submitter FEATURES Qualifiers source /organism="Arabidopsis thaliana" /mol_type="genomic DNA" /db_xref="taxon:3702" /chromosome="4" /ecotype="Columbia" protein /locus_tag="AT4G09040" /gene_synonym="F23J3.70" /gene_synonym="F23J3_70" /inference="Similar to RNA sequence, EST:INSD:EH796127.1,INSD:ES150307.1,INSD:EH930786.1, INSD:EL263641.1,INSD:AV558443.1,INSD:EH819146.1, INSD:BP641956.1,INSD:EH901091.1,INSD:BP861268.1, INSD:EL307915.1,INSD:DR278714.1,INSD:DR297582.1, INSD:ES013009.1,INSD:DR278707.1,INSD:DR380451.1, INSD:EH795649.1,INSD:EL103075.1,INSD:EH821785.1, INSD:EH842193.1,INSD:EL032332.1,INSD:AV558108.1, INSD:EL312517.1,INSD:EH990662.1,INSD:EH949456.1, INSD:EL021622.1,INSD:ES191221.1,INSD:BP847440.1, INSD:EL215048.1,INSD:DR297583.1,INSD:BP781533.1, INSD:EL088233.1,INSD:ES116028.1,INSD:EL334020.1, INSD:EH907599.1,INSD:EH939450.1,INSD:EL202336.1, INSD:EH860887.1,INSD:BP631142.1,INSD:DR297584.1, INSD:EH886130.1,INSD:BP653125.1,INSD:AV441415.1, INSD:EH935449.1,INSD:EH909491.1,INSD:EL328315.1, INSD:EL143507.1,INSD:EL205869.1,INSD:DR379091.1, INSD:DR297585.1,INSD:BP616434.1,INSD:CF773369.1, INSD:EL044001.1,INSD:EH928262.1,INSD:EL164546.1, INSD:EH814407.1,INSD:EL053208.1,INSD:EH876787.1, INSD:EH900449.1,INSD:EL103283.1,INSD:EH896733.1, INSD:EH806718.1,INSD:EL258051.1,INSD:ES076247.1" /note="RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT2G35410.1); Has 1165 Blast hits to 1048 proteins in 88 species: Archae - 0; Bacteria - 0; Metazoa - 539; Fungi - 16; Plants - 571; Viruses - 0; Other Eukaryotes - 39 (source: NCBI BLink)." /db_xref="TAIR:AT4G09040" /db_xref="Araport:AT4G09040" intron_pos 31:0 (1/4) intron_pos 65:0 (2/4) intron_pos 98:0 (3/4) intron_pos 195:0 (4/4) BEGIN 1 MSSPSSRDVS RLNSSKIQKP HFVLLHHNTR ISKTRLIAQN VPWTSTPEDI RSLFEKYGSV 61 IDIEMSMHKK ERNRGLVFIE MASPEEAATA LKSLESCEYE GRRLKVDYAK TKKKKTYAPR 121 ETPSPVPTFN LFVANLAFEA RAKHLKEFFD ADTGNVVSTE VIFHENPRRS SGYGFVSFKT 181 KKQAEAALIE FQGKDFLGRP IRLAKSKQFV KLQAKEGLQP PEEEAEEEPS QSETMTQEHE 241 TPAA //