LOCUS AEE82273.1 439 aa PRT PLN 23-MAR-2023 DEFINITION Arabidopsis thaliana RNA-binding protein-defense related 1 protein. ACCESSION CP002687-639 PROTEIN_ID AEE82273.1 SOURCE Arabidopsis thaliana (thale cress) ORGANISM Arabidopsis thaliana Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis. REFERENCE 1 (bases 1 to 18585056) AUTHORS Mayer,K., Schuller,C., Wambutt,R., Murphy,G., Volckaert,G., Pohl,T., Dusterhoft,A., Stiekema,W., Entian,K.D., Terryn,N., Harris,B., Ansorge,W., Brandt,P., Grivell,L., Rieger,M., Weichselgartner,M., de Simone,V., Obermaier,B., Mache,R., Muller,M., Kreis,M., Delseny,M., Puigdomenech,P., Watson,M., Schmidtheini,T., Reichert,B., Portatelle,D., Perez-Alonso,M., Boutry,M., Bancroft,I., Vos,P., Hoheisel,J., Zimmermann,W., Wedler,H., Ridley,P., Langham,S.A., McCullagh,B., Bilham,L., Robben,J., Van der Schueren,J., Grymonprez,B., Chuang,Y.J., Vandenbussche,F., Braeken,M., Weltjens,I., Voet,M., Bastiaens,I., Aert,R., Defoor,E., Weitzenegger,T., Bothe,G., Ramsperger,U., Hilbert,H., Braun,M., Holzer,E., Brandt,A., Peters,S., van Staveren,M., Dirske,W., Mooijman,P., Klein Lankhorst,R., Rose,M., Hauf,J., Kotter,P., Berneiser,S., Hempel,S., Feldpausch,M., Lamberth,S., Van den Daele,H., De Keyser,A., Buysshaert,C., Gielen,J., Villarroel,R., De Clercq,R., Van Montagu,M., Rogers,J., Cronin,A., Quail,M., Bray-Allen,S., Clark,L., Doggett,J., Hall,S., Kay,M., Lennard,N., McLay,K., Mayes,R., Pettett,A., Rajandream,M.A., Lyne,M., Benes,V., Rechmann,S., Borkova,D., Blocker,H., Scharfe,M., Grimm,M., Lohnert,T.H., Dose,S., de Haan,M., Maarse,A., Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Fartmann,B., Granderath,K., Dauner,D., Herzl,A., Neumann,S., Argiriou,A., Vitale,D., Liguori,R., Piravandi,E., Massenet,O., Quigley,F., Clabauld,G., Mundlein,A., Felber,R., Schnabl,S., Hiller,R., Schmidt,W., Lecharny,A., Aubourg,S., Chefdor,F., Cooke,R., Berger,C., Montfort,A., Casacuberta,E., Gibbons,T., Weber,N., Vandenbol,M., Bargues,M., Terol,J., Torres,A., Perez-Perez,A., Purnelle,B., Bent,E., Johnson,S., Tacon,D., Jesse,T., Heijnen,L., Schwarz,S., Scholler,P., Heber,S., Francs,P., Bielke,C., Frishman,D., Haase,D., Lemcke,K., Mewes,H.W., Stocker,S., Zaccaria,P., Bevan,M., Wilson,R.K., de la Bastide,M., Habermann,K., Parnell,L., Dedhia,N., Gnoj,L., Schutz,K., Huang,E., Spiegel,L., Sehkon,M., Murray,J., Sheet,P., Cordes,M., Abu-Threideh,J., Stoneking,T., Kalicki,J., Graves,T., Harmon,G., Edwards,J., Latreille,P., Courtney,L., Cloud,J., Abbott,A., Scott,K., Johnson,D., Minx,P., Bentley,D., Fulton,B., Miller,N., Greco,T., Kemp,K., Kramer,J., Fulton,L., Mardis,E., Dante,M., Pepin,K., Hillier,L., Nelson,J., Spieth,J., Ryan,E., Andrews,S., Geisel,C., Layman,D., Du,H., Ali,J., Berghoff,A., Jones,K., Drone,K., Cotton,M., Joshu,C., Antonoiu,B., Zidanic,M., Strong,C., Sun,H., Lamar,B., Yordan,C., Ma,P., Zhong,J., Preston,R., Vil,D., Shekher,M., Matero,A., Shah,R., Swaby,I.K., O'Shaughnessy,A., Rodriguez,M., Hoffmann,J., Till,S., Granat,S., Shohdy,N., Hasegawa,A., Hameed,A., Lodhi,M., Johnson,A., Chen,E., Marra,M., Martienssen,R. and McCombie,W.R. TITLE Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana JOURNAL Nature 402 (6763), 769-777 (1999) PUBMED 10617198 REFERENCE 2 (bases 1 to 18585056) AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E. CONSRTM TAIR TITLE Direct Submission JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie Institution, 260 Panama Street, Stanford, CA, USA REFERENCE 3 (bases 1 to 18585056) AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M., Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R., Vaughn,M. and Town,C.D. TITLE Direct Submission JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute, 9704 Medical Center Dr, Rockville, MD 20850, USA REMARK Protein update by submitter FEATURES Qualifiers source /organism="Arabidopsis thaliana" /mol_type="genomic DNA" /db_xref="taxon:3702" /chromosome="4" /ecotype="Columbia" protein /gene="RBP-DR1" /locus_tag="AT4G03110" /gene_synonym="AtBRN1" /gene_synonym="AtRBP-DR1" /gene_synonym="BRN1" /gene_synonym="Bruno-like 1" /gene_synonym="F4C21.3" /gene_synonym="RNA-binding protein-defense related 1" /inference="Similar to RNA sequence, EST:INSD:EH933975.1,INSD:EL197954.1,INSD:EH845959.1, INSD:EH972640.1,INSD:EL020171.1,INSD:EL108958.1, INSD:EH894538.1,INSD:BP671890.1,INSD:EL304160.1, INSD:EL216775.1,INSD:BP823566.1,INSD:ES015150.1, INSD:EL112582.1,INSD:EH843434.1,INSD:EL269201.1, INSD:EL252032.1,INSD:EL302001.1,INSD:EH958008.1, INSD:EL121081.1,INSD:EL174303.1,INSD:BP662713.1, INSD:EH984578.1,INSD:EL224411.1,INSD:EL136483.1, INSD:EL217061.1,INSD:EL083495.1,INSD:EL221589.1, INSD:EH801777.1,INSD:BP668382.1,INSD:EL252694.1, INSD:EL330500.1,INSD:CK117649.1,INSD:EH902069.1, INSD:EL149472.1,INSD:EL230990.1,INSD:EH878356.1, INSD:EL063164.1,INSD:EL113455.1,INSD:EL221607.1, INSD:EH978006.1,INSD:EH869776.1,INSD:EH865820.1, INSD:EH886332.1,INSD:EL164684.1,INSD:EH907206.1, INSD:EL240442.1,INSD:AV803654.1,INSD:EL243744.1, INSD:DR285815.1,INSD:EL007155.1,INSD:EL178366.1, INSD:BP814783.1,INSD:EL261072.1,INSD:BP862681.1, INSD:N38571.1,INSD:AV828970.1,INSD:ES158561.1, INSD:EL118392.1" /inference="Similar to RNA sequence, mRNA:INSD:AY065261.1" /note="RNA-binding protein-defense related 1 (RBP-DR1); FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; INVOLVED IN: plant-type hypersensitive response, positive regulation of salicylic acid mediated signaling pathway; LOCATED IN: cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Ribonucleoprotein, BRUNO-like (InterPro:IPR015903), Paraneoplastic encephalomyelitis antigen (InterPro:IPR002343), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT1G03457.1); Has 16162 Blast hits to 12321 proteins in 473 species: Archae - 8; Bacteria - 251; Metazoa - 10325; Fungi - 1647; Plants - 2258; Viruses - 0; Other Eukaryotes - 1673 (source: NCBI BLink)." /db_xref="TAIR:AT4G03110" /db_xref="Araport:AT4G03110" intron_pos 60:1 (1/7) intron_pos 88:0 (2/7) intron_pos 105:1 (3/7) intron_pos 147:1 (4/7) intron_pos 174:0 (5/7) intron_pos 234:0 (6/7) intron_pos 344:1 (7/7) BEGIN 1 MAEAKEENRE KNEEEESVKL FVGQIPKHMS ESQLLTLFQE FAVVDEVNII KDKITRASRG 61 CCFLLCPSRE EADKLVNACH NKKTLPGANS LLQVKYADGE LERLEHKLFV GMLPKNVSEA 121 EVQSLFSKYG TIKDLQILRG AQQTSKGCAF LKYETKEQAV SAMESINGKH KMEGSTVPLV 181 VKWADTERER HTRRLQKAQS HIARLGNGDP TNPSLFGALP MGYVPPYNGY GYHPPGTYGY 241 MLPPIQNQAA FSNMIAQPNQ GNNNALQGTS PDSVPPRLAR RNFPMPPGNY MGSGYPAMRG 301 HPFPFAYPRG IVSPRPLSSS PGSISPGMST PLGIGLSSVV QTEGPEGANL FIYNIPREFG 361 DQELAAAFQS FGIVLSAKVF VDKATGVSKC FGKLSFDLVF PLLKLVHCEG RKKAFFCCCC 421 WLQVLLAMTH KPRRRTLLT //