LOCUS AEE80446.1 275 aa PRT PLN 23-MAR-2023 DEFINITION Arabidopsis thaliana ribosome recycling factor, chloroplast precursor protein. ACCESSION CP002686-9393 PROTEIN_ID AEE80446.1 SOURCE Arabidopsis thaliana (thale cress) ORGANISM Arabidopsis thaliana Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis. REFERENCE 1 (bases 1 to 23459830) AUTHORS Salanoubat,M., Lemcke,K., Rieger,M., Ansorge,W., Unseld,M., Fartmann,B., Valle,G., Blocker,H., Perez-Alonso,M., Obermaier,B., Delseny,M., Boutry,M., Grivell,L.A., Mache,R., Puigdomenech,P., De Simone,V., Choisne,N., Artiguenave,F., Robert,C., Brottier,P., Wincker,P., Cattolico,L., Weissenbach,J., Saurin,W., Quetier,F., Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Benes,V., Wurmbach,E., Drzonek,H., Erfle,H., Jordan,N., Bangert,S., Wiedelmann,R., Kranz,H., Voss,H., Holland,R., Brandt,P., Nyakatura,G., Vezzi,A., D'Angelo,M., Pallavicini,A., Toppo,S., Simionati,B., Conrad,A., Hornischer,K., Kauer,G., Lohnert,T.H., Nordsiek,G., Reichelt,J., Scharfe,M., Schon,O., Bargues,M., Terol,J., Climent,J., Navarro,P., Collado,C., Perez-Perez,A., Ottenwalder,B., Duchemin,D., Cooke,R., Laudie,M., Berger-Llauro,C., Purnelle,B., Masuy,D., de Haan,M., Maarse,A.C., Alcaraz,J.P., Cottet,A., Casacuberta,E., Monfort,A., Argiriou,A., flores,M., Liguori,R., Vitale,D., Mannhaupt,G., Haase,D., Schoof,H., Rudd,S., Zaccaria,P., Mewes,H.W., Mayer,K.F., Kaul,S., Town,C.D., Koo,H.L., Tallon,L.J., Jenkins,J., Rooney,T., Rizzo,M., Walts,A., Utterback,T., Fujii,C.Y., Shea,T.P., Creasy,T.H., Haas,B., Maiti,R., Wu,D., Peterson,J., Van Aken,S., Pai,G., Militscher,J., Sellers,P., Gill,J.E., Feldblyum,T.V., Preuss,D., Lin,X., Nierman,W.C., Salzberg,S.L., White,O., Venter,J.C., Fraser,C.M., Kaneko,T., Nakamura,Y., Sato,S., Kato,T., Asamizu,E., Sasamoto,S., Kimura,T., Idesawa,K., Kawashima,K., Kishida,Y., Kiyokawa,C., Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S., Nakazaki,N., Shinpo,S., Takeuchi,C., Wada,T., Watanabe,A., Yamada,M., Yasuda,M. and Tabata,S. CONSRTM European Union Chromosome 3 Arabidopsis Sequencing Consortium; Institute for Genomic Research; Kazusa DNA Research Institute TITLE Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana JOURNAL Nature 408 (6814), 820-822 (2000) PUBMED 11130713 REFERENCE 2 (bases 1 to 23459830) AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E. CONSRTM TAIR TITLE Direct Submission JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie Institution, 260 Panama Street, Stanford, CA, USA REFERENCE 3 (bases 1 to 23459830) AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M., Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R., Vaughn,M. and Town,C.D. TITLE Direct Submission JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute, 9704 Medical Center Dr, Rockville, MD 20850, USA REMARK Protein update by submitter FEATURES Qualifiers source /organism="Arabidopsis thaliana" /mol_type="genomic DNA" /db_xref="taxon:3702" /chromosome="3" /ecotype="Columbia" protein /gene="RRF" /locus_tag="AT3G63190" /gene_synonym="''ribosome recycling factor" /gene_synonym="Arabidopsis thaliana chloroplast ribosome recycling factor" /gene_synonym="AtcpRRF" /gene_synonym="chloroplast precursor" /gene_synonym="chloroplast precursor''" /gene_synonym="chloroplast ribosome recycling factor" /gene_synonym="cpRRF" /gene_synonym="HFP108" /gene_synonym="HIGH CHLOROPHYLL FLUORESCENCE AND PALE GREEN MUTANT 108" /gene_synonym="ribosome recycling factor" /inference="Similar to RNA sequence, EST:INSD:DR322151.1,INSD:BP844559.1,INSD:BP646177.1, INSD:EL113889.1,INSD:EL102525.1,INSD:EL229497.1, INSD:EH889533.1,INSD:EL010114.1,INSD:DR226297.1, INSD:EL245113.1,INSD:EL033933.1,INSD:EL278715.1, INSD:BP857458.1,INSD:DR322145.1,INSD:BP832506.1, INSD:EH886769.1,INSD:EL142529.1,INSD:BP851742.1, INSD:EH797250.1,INSD:BX840964.1,INSD:EG463105.1, INSD:AV796240.1,INSD:EL153166.1,INSD:EH901634.1, INSD:EL250887.1,INSD:EL218616.1,INSD:BP825896.1, INSD:DR322139.1,INSD:DR322150.1,INSD:DR372970.1, INSD:EG514652.1,INSD:EH834904.1,INSD:EH891722.1, INSD:ES172964.1,INSD:EL166349.1,INSD:DR322136.1, INSD:EG463099.1,INSD:EG463098.1,INSD:AV826778.1, INSD:EL969758.1,INSD:BP865800.1,INSD:EH976328.1, INSD:ES209178.1,INSD:ES031610.1,INSD:DR322148.1, INSD:BP650627.1,INSD:BP851358.1,INSD:BP814007.1, INSD:DR322138.1,INSD:EL140711.1,INSD:ES005740.1, INSD:EL286566.1,INSD:DR322141.1,INSD:EL284980.1, INSD:EH983607.1,INSD:BP855446.1,INSD:BP852426.1, INSD:DR322142.1,INSD:DR322152.1,INSD:ES137282.1, INSD:EL012863.1,INSD:AV826153.1,INSD:DR322137.1, INSD:EL113749.1,INSD:EL086084.1,INSD:EH960377.1, INSD:BP663000.1,INSD:EL205711.1,INSD:DR322154.1, INSD:DR322144.1,INSD:AV787764.1,INSD:BP665722.1, INSD:DR322153.1,INSD:BP823481.1,INSD:BP664301.1, INSD:DR322133.1,INSD:EL040005.1,INSD:EL284687.1, INSD:AV566107.1,INSD:BP622057.1,INSD:EH827572.1, INSD:DR322135.1,INSD:EH957509.1,INSD:BP816525.1, INSD:AV807685.1,INSD:BP840748.1,INSD:AI998453.1, INSD:BP824987.1,INSD:DR322143.1,INSD:EL049234.1, INSD:EG463106.1,INSD:AV521528.1,INSD:EL033188.1" /inference="Similar to RNA sequence, mRNA:INSD:AF372883.1,INSD:BT002678.1,INSD:BX825146.1, INSD:AY092982.1,INSD:AY056778.1" /note="''ribosome recycling factor, chloroplast precursor'' (RRF); FUNCTIONS IN: copper ion binding; INVOLVED IN: in 6 processes; LOCATED IN: thylakoid, chloroplast stroma, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ribosome recycling factor, bacterial-like (InterPro:IPR015998), Ribosome recycling factor (InterPro:IPR002661); BEST Arabidopsis thaliana protein match is: Ribosome recycling factor (TAIR:AT3G01800.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink)." /db_xref="TAIR:AT3G63190" /db_xref="Araport:AT3G63190" intron_pos 30:1 (1/10) intron_pos 77:2 (2/10) intron_pos 100:0 (3/10) intron_pos 132:0 (4/10) intron_pos 164:2 (5/10) intron_pos 202:0 (6/10) intron_pos 216:0 (7/10) intron_pos 235:0 (8/10) intron_pos 252:0 (9/10) intron_pos 271:0 (10/10) BEGIN 1 MAASFSSTAP TTPVLRFRAN YSKPLLSLPD SCLRIISSAI SPSTRLIACS FKTDKLPLGA 61 GVNLSGGPVV KRSLQKRLVI RSATIEEIEA EKSAIETDVK SKMEKTIETL RTSFNSIRTG 121 RSNAAMLDKI EVEYYGSPVS LKSIAQISTP DGSSLLLQPY DKSSLKAIEK AIVNSDLGVT 181 PNNDGDVIRL SLPPLTSDRR KELSKVVAKQ SEEGKVALRN IRRDALKSYD KLEKEKKLSE 241 DNVKDLSSDL QKLIDVYMKK IEELYKQKEK ELMKV //