LOCUS       AEE79944.1               146 aa    PRT              PLN 23-MAR-2023
DEFINITION  Arabidopsis thaliana RNA polymerase Rpb8 protein.
ACCESSION   CP002686-8722
PROTEIN_ID  AEE79944.1
SOURCE      Arabidopsis thaliana (thale cress)
  ORGANISM  Arabidopsis thaliana
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
            Camelineae; Arabidopsis.
REFERENCE   1  (bases 1 to 23459830)
  AUTHORS   Salanoubat,M., Lemcke,K., Rieger,M., Ansorge,W., Unseld,M.,
            Fartmann,B., Valle,G., Blocker,H., Perez-Alonso,M., Obermaier,B.,
            Delseny,M., Boutry,M., Grivell,L.A., Mache,R., Puigdomenech,P., De
            Simone,V., Choisne,N., Artiguenave,F., Robert,C., Brottier,P.,
            Wincker,P., Cattolico,L., Weissenbach,J., Saurin,W., Quetier,F.,
            Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Benes,V.,
            Wurmbach,E., Drzonek,H., Erfle,H., Jordan,N., Bangert,S.,
            Wiedelmann,R., Kranz,H., Voss,H., Holland,R., Brandt,P.,
            Nyakatura,G., Vezzi,A., D'Angelo,M., Pallavicini,A., Toppo,S.,
            Simionati,B., Conrad,A., Hornischer,K., Kauer,G., Lohnert,T.H.,
            Nordsiek,G., Reichelt,J., Scharfe,M., Schon,O., Bargues,M.,
            Terol,J., Climent,J., Navarro,P., Collado,C., Perez-Perez,A.,
            Ottenwalder,B., Duchemin,D., Cooke,R., Laudie,M., Berger-Llauro,C.,
            Purnelle,B., Masuy,D., de Haan,M., Maarse,A.C., Alcaraz,J.P.,
            Cottet,A., Casacuberta,E., Monfort,A., Argiriou,A., flores,M.,
            Liguori,R., Vitale,D., Mannhaupt,G., Haase,D., Schoof,H., Rudd,S.,
            Zaccaria,P., Mewes,H.W., Mayer,K.F., Kaul,S., Town,C.D., Koo,H.L.,
            Tallon,L.J., Jenkins,J., Rooney,T., Rizzo,M., Walts,A.,
            Utterback,T., Fujii,C.Y., Shea,T.P., Creasy,T.H., Haas,B.,
            Maiti,R., Wu,D., Peterson,J., Van Aken,S., Pai,G., Militscher,J.,
            Sellers,P., Gill,J.E., Feldblyum,T.V., Preuss,D., Lin,X.,
            Nierman,W.C., Salzberg,S.L., White,O., Venter,J.C., Fraser,C.M.,
            Kaneko,T., Nakamura,Y., Sato,S., Kato,T., Asamizu,E., Sasamoto,S.,
            Kimura,T., Idesawa,K., Kawashima,K., Kishida,Y., Kiyokawa,C.,
            Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
            Nakazaki,N., Shinpo,S., Takeuchi,C., Wada,T., Watanabe,A.,
            Yamada,M., Yasuda,M. and Tabata,S.
  CONSRTM   European Union Chromosome 3 Arabidopsis Sequencing Consortium;
            Institute for Genomic Research; Kazusa DNA Research Institute
  TITLE     Sequence and analysis of chromosome 3 of the plant Arabidopsis
            thaliana
  JOURNAL   Nature 408 (6814), 820-822 (2000)
   PUBMED   11130713
REFERENCE   2  (bases 1 to 23459830)
  AUTHORS   Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
  CONSRTM   TAIR
  TITLE     Direct Submission
  JOURNAL   Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
            Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE   3  (bases 1 to 23459830)
  AUTHORS   Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
            Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
            Vaughn,M. and Town,C.D.
  TITLE     Direct Submission
  JOURNAL   Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
            9704 Medical Center Dr, Rockville, MD 20850, USA
  REMARK    Protein update by submitter
FEATURES             Qualifiers
     source          /organism="Arabidopsis thaliana"
                     /mol_type="genomic DNA"
                     /db_xref="taxon:3702"
                     /chromosome="3"
                     /ecotype="Columbia"
     protein         /gene="NRPB8B"
                     /locus_tag="AT3G59600"
                     /gene_synonym="NRPD8B"
                     /gene_synonym="NRPE8B"
                     /inference="Similar to RNA sequence,
                     EST:INSD:BX838361.1,INSD:EH842759.1,INSD:EL077369.1,
                     INSD:ES117930.1,INSD:DR199593.1,INSD:EL981582.1,
                     INSD:DR199597.1,INSD:ES111262.1,INSD:AV535613.1,
                     INSD:DR372627.1,INSD:BP631064.1,INSD:DR199598.1,
                     INSD:EL318829.1,INSD:DR199600.1,INSD:AU239898.1,
                     INSD:BP832542.1,INSD:DR251858.1,INSD:DR199594.1,
                     INSD:BP816602.1,INSD:DR199601.1,INSD:EL998236.1,
                     INSD:EL147320.1,INSD:DR251860.1,INSD:DR375670.1,
                     INSD:DR251857.1,INSD:DR373208.1,INSD:DR199599.1,
                     INSD:BP825533.1,INSD:EH907204.1,INSD:ES069862.1,
                     INSD:DR199602.1,INSD:DR251859.1,INSD:ES074806.1,
                     INSD:EL337310.1,INSD:ES144028.1,INSD:DR199596.1,
                     INSD:DR199595.1"
                     /inference="Similar to RNA sequence,
                     mRNA:INSD:BX826263.1,INSD:AY086002.1,INSD:AK119016.1,
                     INSD:BT008531.1"
                     /note="NRPB8B; FUNCTIONS IN: DNA-directed RNA polymerase
                     activity; INVOLVED IN: transcription; LOCATED IN:
                     DNA-directed RNA polymerase II, core complex; CONTAINS
                     InterPro DOMAIN/s: Nucleic acid-binding, OB-fold-like
                     (InterPro:IPR016027), Nucleic acid-binding, OB-fold
                     (InterPro:IPR012340), RNA polymerase, Rpb8
                     (InterPro:IPR005570); BEST Arabidopsis thaliana protein
                     match is: RNA polymerase Rpb8 (TAIR:AT1G54250.1); Has 513
                     Blast hits to 511 proteins in 218 species: Archae - 0;
                     Bacteria - 0; Metazoa - 139; Fungi - 205; Plants - 84;
                     Viruses - 0; Other Eukaryotes - 85 (source: NCBI BLink)."
                     /db_xref="TAIR:AT3G59600"
                     /db_xref="Araport:AT3G59600"
     intron_pos      27:1 (1/3)
     intron_pos      80:0 (2/3)
     intron_pos      110:2 (3/3)
BEGIN
        1 MASNIIMFED IFVVDKLDPD GKKFDKVTRV EARSHNLEMF MHLDVNTEVY PLAVGDKFTL
       61 AMAPTLNLDG TPDTGYFTPG AKKTLADKYE YIMHGKLYKI SERDGKTPKA ELYVSFGGLL
      121 MLLQGDPAHI SHFELDQRLF LLMRKL
//