LOCUS AEE79113.1 362 aa PRT PLN 23-MAR-2023 DEFINITION Arabidopsis thaliana diaminopimelate epimerase family protein protein. ACCESSION CP002686-7570 PROTEIN_ID AEE79113.1 SOURCE Arabidopsis thaliana (thale cress) ORGANISM Arabidopsis thaliana Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis. REFERENCE 1 (bases 1 to 23459830) AUTHORS Salanoubat,M., Lemcke,K., Rieger,M., Ansorge,W., Unseld,M., Fartmann,B., Valle,G., Blocker,H., Perez-Alonso,M., Obermaier,B., Delseny,M., Boutry,M., Grivell,L.A., Mache,R., Puigdomenech,P., De Simone,V., Choisne,N., Artiguenave,F., Robert,C., Brottier,P., Wincker,P., Cattolico,L., Weissenbach,J., Saurin,W., Quetier,F., Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Benes,V., Wurmbach,E., Drzonek,H., Erfle,H., Jordan,N., Bangert,S., Wiedelmann,R., Kranz,H., Voss,H., Holland,R., Brandt,P., Nyakatura,G., Vezzi,A., D'Angelo,M., Pallavicini,A., Toppo,S., Simionati,B., Conrad,A., Hornischer,K., Kauer,G., Lohnert,T.H., Nordsiek,G., Reichelt,J., Scharfe,M., Schon,O., Bargues,M., Terol,J., Climent,J., Navarro,P., Collado,C., Perez-Perez,A., Ottenwalder,B., Duchemin,D., Cooke,R., Laudie,M., Berger-Llauro,C., Purnelle,B., Masuy,D., de Haan,M., Maarse,A.C., Alcaraz,J.P., Cottet,A., Casacuberta,E., Monfort,A., Argiriou,A., flores,M., Liguori,R., Vitale,D., Mannhaupt,G., Haase,D., Schoof,H., Rudd,S., Zaccaria,P., Mewes,H.W., Mayer,K.F., Kaul,S., Town,C.D., Koo,H.L., Tallon,L.J., Jenkins,J., Rooney,T., Rizzo,M., Walts,A., Utterback,T., Fujii,C.Y., Shea,T.P., Creasy,T.H., Haas,B., Maiti,R., Wu,D., Peterson,J., Van Aken,S., Pai,G., Militscher,J., Sellers,P., Gill,J.E., Feldblyum,T.V., Preuss,D., Lin,X., Nierman,W.C., Salzberg,S.L., White,O., Venter,J.C., Fraser,C.M., Kaneko,T., Nakamura,Y., Sato,S., Kato,T., Asamizu,E., Sasamoto,S., Kimura,T., Idesawa,K., Kawashima,K., Kishida,Y., Kiyokawa,C., Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S., Nakazaki,N., Shinpo,S., Takeuchi,C., Wada,T., Watanabe,A., Yamada,M., Yasuda,M. and Tabata,S. CONSRTM European Union Chromosome 3 Arabidopsis Sequencing Consortium; Institute for Genomic Research; Kazusa DNA Research Institute TITLE Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana JOURNAL Nature 408 (6814), 820-822 (2000) PUBMED 11130713 REFERENCE 2 (bases 1 to 23459830) AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E. CONSRTM TAIR TITLE Direct Submission JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie Institution, 260 Panama Street, Stanford, CA, USA REFERENCE 3 (bases 1 to 23459830) AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M., Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R., Vaughn,M. and Town,C.D. TITLE Direct Submission JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute, 9704 Medical Center Dr, Rockville, MD 20850, USA REMARK Protein update by submitter FEATURES Qualifiers source /organism="Arabidopsis thaliana" /mol_type="genomic DNA" /db_xref="taxon:3702" /chromosome="3" /ecotype="Columbia" protein /locus_tag="AT3G53580" /inference="Similar to RNA sequence, EST:INSD:EL161090.1,INSD:AV815213.1,INSD:DR361444.1, INSD:EH903788.1,INSD:EL308602.1,INSD:DR361441.1, INSD:DR377844.1,INSD:AV551609.1,INSD:AV785187.1, INSD:EL035064.1,INSD:EL107483.1,INSD:EH841173.1, INSD:ES127731.1,INSD:BP625449.1,INSD:DR361449.1, INSD:DR356416.1,INSD:DR361453.1,INSD:BX838534.1, INSD:AV564304.1,INSD:DR356420.1,INSD:EH975633.1, INSD:DR356415.1,INSD:EH915821.1,INSD:T42830.1, INSD:DR361447.1,INSD:EH839140.1,INSD:DR361448.1, INSD:DR237247.1,INSD:DR361430.1,INSD:DR361436.1, INSD:EL173732.1,INSD:DR361461.1,INSD:DR361435.1, INSD:EH923955.1,INSD:EL994510.1,INSD:ES017171.1, INSD:DR361454.1,INSD:EH895873.1,INSD:EL192208.1, INSD:EL186678.1,INSD:DR361439.1,INSD:DR361438.1, INSD:AI997796.1,INSD:EH924012.1,INSD:ES168485.1, INSD:DR361432.1,INSD:DR380801.1,INSD:EL161271.1, INSD:ES090540.1,INSD:EL142778.1,INSD:EL070251.1, INSD:EH980201.1,INSD:CB253262.1,INSD:DR237243.1, INSD:EL242153.1,INSD:EH821129.1,INSD:AV566257.1, INSD:EG467452.1,INSD:EH988092.1,INSD:EL293570.1, INSD:DR361462.1,INSD:EH811178.1,INSD:EH899554.1, INSD:EL983350.1,INSD:BX835132.1,INSD:DR356417.1, INSD:AV784497.1,INSD:EL201849.1,INSD:DR361458.1, INSD:DR380790.1,INSD:DR361433.1,INSD:BP636088.1, INSD:DR361446.1,INSD:EH887663.1,INSD:AV440665.1, INSD:DR361445.1,INSD:EL092075.1,INSD:AV824050.1, INSD:DR361440.1,INSD:AV534937.1,INSD:AV441974.1, INSD:AV439586.1,INSD:EL198813.1,INSD:EG521089.1, INSD:T04612.1,INSD:DR361452.1,INSD:EH873970.1, INSD:AV518382.1,INSD:EG499735.1,INSD:EL110690.1, INSD:DR361460.1,INSD:DR382614.1,INSD:EL042600.1, INSD:EG467453.1,INSD:DR376591.1,INSD:DR361459.1, INSD:DR361450.1,INSD:EL324360.1,INSD:EG499734.1, INSD:DR374196.1,INSD:DR361451.1,INSD:EL333599.1, INSD:EL209120.1,INSD:EL006745.1,INSD:DR361428.1, INSD:EL285298.1,INSD:EL086906.1,INSD:AV539205.1, INSD:DR356419.1,INSD:EL177137.1,INSD:AI994805.1, INSD:DR361457.1,INSD:EL167915.1,INSD:ES169349.1, INSD:DR361431.1,INSD:DR237242.1,INSD:DR361429.1, INSD:EL267906.1,INSD:DR361455.1,INSD:EL127354.1, INSD:DR237244.1,INSD:ES159907.1,INSD:ES112225.1, INSD:DR356418.1,INSD:EL976202.1,INSD:AV816832.1, INSD:EH804062.1,INSD:DR361463.1,INSD:EH868938.1, INSD:ES185809.1,INSD:DR361456.1,INSD:EH923797.1, INSD:AV558777.1,INSD:EL341619.1,INSD:EH863078.1, INSD:EL238510.1,INSD:EH963772.1,INSD:BP561026.1, INSD:EL131929.1,INSD:BE529275.1,INSD:ES048278.1, INSD:AV442338.1,INSD:BX837545.1,INSD:AV561832.1, INSD:BX834623.1,INSD:EH970822.1,INSD:N38672.1, INSD:CB256888.1" /inference="Similar to RNA sequence, mRNA:INSD:BX824490.1,INSD:AY126996.1,INSD:AY143871.1, INSD:BX823864.1,INSD:BX824658.1,INSD:BX823665.1, INSD:BX825393.1,INSD:BX824557.1" /note="diaminopimelate epimerase family protein; FUNCTIONS IN: diaminopimelate epimerase activity; INVOLVED IN: lysine biosynthetic process via diaminopimelate; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Diaminopimelate epimerase, active site (InterPro:IPR018510), Diaminopimelate epimerase (InterPro:IPR001653); Has 7123 Blast hits to 7119 proteins in 2112 species: Archae - 88; Bacteria - 4300; Metazoa - 6; Fungi - 0; Plants - 62; Viruses - 0; Other Eukaryotes - 2667 (source: NCBI BLink)." /db_xref="TAIR:AT3G53580" /db_xref="Araport:AT3G53580" intron_pos 93:0 (1/8) intron_pos 149:0 (2/8) intron_pos 172:2 (3/8) intron_pos 192:0 (4/8) intron_pos 252:0 (5/8) intron_pos 280:1 (6/8) intron_pos 300:1 (7/8) intron_pos 325:0 (8/8) BEGIN 1 MEIAAVSTVS VAPQSRRVSN AFSRNLGSVS SLSFGFFEKE YCFKSPSLRV SAAASMDAVT 61 AEKFSPASFL DKKETGVLHF VKYHGLGNDF ILVDNRDSSE PKITQEQAAK LCDRNFGVGA 121 DGVIFAMPGV NGTDYAMRIF NSDGSEPEMC GNGVRCFARF IAELENLQGK HSFTIHTGAG 181 LIVPEIQDDG QVKVDMGTPI LKAQDVPTKL SGNKGEAVVE AELVVDGVSW NVTCVSMGNP 241 HCITFGKKGG PNLKVDDLNL PEIGPKFEHH EMFPARTNTE FVEVLSRSHL KMRVWERGAG 301 ATLACGTGAC ALVVAAVLEG RADRKCTVDL PGGPLEIEWK QEDNHIYMTG PAEAVFYGSA 361 LL //