LOCUS       AEE78922.1               294 aa    PRT              PLN 23-MAR-2023
DEFINITION  Arabidopsis thaliana Pseudouridine synthase family protein protein.
ACCESSION   CP002686-7332
PROTEIN_ID  AEE78922.1
SOURCE      Arabidopsis thaliana (thale cress)
  ORGANISM  Arabidopsis thaliana
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
            Camelineae; Arabidopsis.
REFERENCE   1  (bases 1 to 23459830)
  AUTHORS   Salanoubat,M., Lemcke,K., Rieger,M., Ansorge,W., Unseld,M.,
            Fartmann,B., Valle,G., Blocker,H., Perez-Alonso,M., Obermaier,B.,
            Delseny,M., Boutry,M., Grivell,L.A., Mache,R., Puigdomenech,P., De
            Simone,V., Choisne,N., Artiguenave,F., Robert,C., Brottier,P.,
            Wincker,P., Cattolico,L., Weissenbach,J., Saurin,W., Quetier,F.,
            Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Benes,V.,
            Wurmbach,E., Drzonek,H., Erfle,H., Jordan,N., Bangert,S.,
            Wiedelmann,R., Kranz,H., Voss,H., Holland,R., Brandt,P.,
            Nyakatura,G., Vezzi,A., D'Angelo,M., Pallavicini,A., Toppo,S.,
            Simionati,B., Conrad,A., Hornischer,K., Kauer,G., Lohnert,T.H.,
            Nordsiek,G., Reichelt,J., Scharfe,M., Schon,O., Bargues,M.,
            Terol,J., Climent,J., Navarro,P., Collado,C., Perez-Perez,A.,
            Ottenwalder,B., Duchemin,D., Cooke,R., Laudie,M., Berger-Llauro,C.,
            Purnelle,B., Masuy,D., de Haan,M., Maarse,A.C., Alcaraz,J.P.,
            Cottet,A., Casacuberta,E., Monfort,A., Argiriou,A., flores,M.,
            Liguori,R., Vitale,D., Mannhaupt,G., Haase,D., Schoof,H., Rudd,S.,
            Zaccaria,P., Mewes,H.W., Mayer,K.F., Kaul,S., Town,C.D., Koo,H.L.,
            Tallon,L.J., Jenkins,J., Rooney,T., Rizzo,M., Walts,A.,
            Utterback,T., Fujii,C.Y., Shea,T.P., Creasy,T.H., Haas,B.,
            Maiti,R., Wu,D., Peterson,J., Van Aken,S., Pai,G., Militscher,J.,
            Sellers,P., Gill,J.E., Feldblyum,T.V., Preuss,D., Lin,X.,
            Nierman,W.C., Salzberg,S.L., White,O., Venter,J.C., Fraser,C.M.,
            Kaneko,T., Nakamura,Y., Sato,S., Kato,T., Asamizu,E., Sasamoto,S.,
            Kimura,T., Idesawa,K., Kawashima,K., Kishida,Y., Kiyokawa,C.,
            Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
            Nakazaki,N., Shinpo,S., Takeuchi,C., Wada,T., Watanabe,A.,
            Yamada,M., Yasuda,M. and Tabata,S.
  CONSRTM   European Union Chromosome 3 Arabidopsis Sequencing Consortium;
            Institute for Genomic Research; Kazusa DNA Research Institute
  TITLE     Sequence and analysis of chromosome 3 of the plant Arabidopsis
            thaliana
  JOURNAL   Nature 408 (6814), 820-822 (2000)
   PUBMED   11130713
REFERENCE   2  (bases 1 to 23459830)
  AUTHORS   Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
  CONSRTM   TAIR
  TITLE     Direct Submission
  JOURNAL   Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
            Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE   3  (bases 1 to 23459830)
  AUTHORS   Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
            Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
            Vaughn,M. and Town,C.D.
  TITLE     Direct Submission
  JOURNAL   Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
            9704 Medical Center Dr, Rockville, MD 20850, USA
  REMARK    Protein update by submitter
FEATURES             Qualifiers
     source          /organism="Arabidopsis thaliana"
                     /mol_type="genomic DNA"
                     /db_xref="taxon:3702"
                     /chromosome="3"
                     /ecotype="Columbia"
     protein         /locus_tag="AT3G52260"
                     /inference="Similar to RNA sequence,
                     EST:INSD:AV796917.1,INSD:ES186414.1,INSD:AV803165.1,
                     INSD:AV816461.1,INSD:EL178324.1,INSD:ES101382.1,
                     INSD:ES008482.1,INSD:AV524013.1,INSD:BP573539.1,
                     INSD:AV523520.1,INSD:ES129317.1,INSD:EL239674.1"
                     /inference="Similar to RNA sequence,
                     mRNA:INSD:AY069882.1,INSD:BT020427.1"
                     /note="Pseudouridine synthase family protein; FUNCTIONS
                     IN: pseudouridine synthase activity, RNA binding; INVOLVED
                     IN: pseudouridine synthesis, RNA modification; LOCATED IN:
                     cellular_component unknown; EXPRESSED IN: 21 plant
                     structures; EXPRESSED DURING: 13 growth stages; CONTAINS
                     InterPro DOMAIN/s: Pseudouridine synthase, catalytic
                     domain (InterPro:IPR020103), Pseudouridine synthase, RsuA
                     and RluB/C/D/E/F (InterPro:IPR006145), Pseudouridine
                     synthase, RluC/RluD, conserved site (InterPro:IPR006224),
                     RNA-binding S4 (InterPro:IPR002942); BEST Arabidopsis
                     thaliana protein match is: Pseudouridine synthase family
                     protein (TAIR:AT5G51140.1); Has 17575 Blast hits to 17575
                     proteins in 2702 species: Archae - 12; Bacteria - 13701;
                     Metazoa - 198; Fungi - 201; Plants - 200; Viruses - 0;
                     Other Eukaryotes - 3263 (source: NCBI BLink)."
                     /db_xref="TAIR:AT3G52260"
                     /db_xref="Araport:AT3G52260"
     intron_pos      31:1 (1/11)
     intron_pos      51:2 (2/11)
     intron_pos      61:0 (3/11)
     intron_pos      76:2 (4/11)
     intron_pos      107:0 (5/11)
     intron_pos      163:1 (6/11)
     intron_pos      191:2 (7/11)
     intron_pos      220:0 (8/11)
     intron_pos      245:1 (9/11)
     intron_pos      268:0 (10/11)
     intron_pos      290:0 (11/11)
BEGIN
        1 MSPPPQRIGL PWPELNDGLA YKDAISSSES ELTTVSEFYF TKYKSSAPLL GWIQRIQNGQ
       61 IQIDGEVVKD PNTLLRSGSK LVYSRLPWKE PDTPYSLEVL YEDDDLIALN KPSGLQVLPG
      121 GLFQQRTVLT QLQWCFGKND SYIGSRESPH PVPVHRLGRG TSGILLCAKT KLAKTKLAAY
      181 FAEGTSLVGS GNLDQECGTG RKLSKIYRAL ADGIVEEDEV VIKQPIGVVR YPGVAQGLYV
      241 ASPEGKPAFS KVFVLERDRE KNCSLVKVEI QSGRPHQIRI HLAYMGHPLG TLFM
//