LOCUS       AEE78879.1               425 aa    PRT              PLN 23-MAR-2023
DEFINITION  Arabidopsis thaliana 5'-3' exonuclease family protein protein.
ACCESSION   CP002686-7270
PROTEIN_ID  AEE78879.1
SOURCE      Arabidopsis thaliana (thale cress)
  ORGANISM  Arabidopsis thaliana
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
            Camelineae; Arabidopsis.
REFERENCE   1  (bases 1 to 23459830)
  AUTHORS   Salanoubat,M., Lemcke,K., Rieger,M., Ansorge,W., Unseld,M.,
            Fartmann,B., Valle,G., Blocker,H., Perez-Alonso,M., Obermaier,B.,
            Delseny,M., Boutry,M., Grivell,L.A., Mache,R., Puigdomenech,P., De
            Simone,V., Choisne,N., Artiguenave,F., Robert,C., Brottier,P.,
            Wincker,P., Cattolico,L., Weissenbach,J., Saurin,W., Quetier,F.,
            Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Benes,V.,
            Wurmbach,E., Drzonek,H., Erfle,H., Jordan,N., Bangert,S.,
            Wiedelmann,R., Kranz,H., Voss,H., Holland,R., Brandt,P.,
            Nyakatura,G., Vezzi,A., D'Angelo,M., Pallavicini,A., Toppo,S.,
            Simionati,B., Conrad,A., Hornischer,K., Kauer,G., Lohnert,T.H.,
            Nordsiek,G., Reichelt,J., Scharfe,M., Schon,O., Bargues,M.,
            Terol,J., Climent,J., Navarro,P., Collado,C., Perez-Perez,A.,
            Ottenwalder,B., Duchemin,D., Cooke,R., Laudie,M., Berger-Llauro,C.,
            Purnelle,B., Masuy,D., de Haan,M., Maarse,A.C., Alcaraz,J.P.,
            Cottet,A., Casacuberta,E., Monfort,A., Argiriou,A., flores,M.,
            Liguori,R., Vitale,D., Mannhaupt,G., Haase,D., Schoof,H., Rudd,S.,
            Zaccaria,P., Mewes,H.W., Mayer,K.F., Kaul,S., Town,C.D., Koo,H.L.,
            Tallon,L.J., Jenkins,J., Rooney,T., Rizzo,M., Walts,A.,
            Utterback,T., Fujii,C.Y., Shea,T.P., Creasy,T.H., Haas,B.,
            Maiti,R., Wu,D., Peterson,J., Van Aken,S., Pai,G., Militscher,J.,
            Sellers,P., Gill,J.E., Feldblyum,T.V., Preuss,D., Lin,X.,
            Nierman,W.C., Salzberg,S.L., White,O., Venter,J.C., Fraser,C.M.,
            Kaneko,T., Nakamura,Y., Sato,S., Kato,T., Asamizu,E., Sasamoto,S.,
            Kimura,T., Idesawa,K., Kawashima,K., Kishida,Y., Kiyokawa,C.,
            Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
            Nakazaki,N., Shinpo,S., Takeuchi,C., Wada,T., Watanabe,A.,
            Yamada,M., Yasuda,M. and Tabata,S.
  CONSRTM   European Union Chromosome 3 Arabidopsis Sequencing Consortium;
            Institute for Genomic Research; Kazusa DNA Research Institute
  TITLE     Sequence and analysis of chromosome 3 of the plant Arabidopsis
            thaliana
  JOURNAL   Nature 408 (6814), 820-822 (2000)
   PUBMED   11130713
REFERENCE   2  (bases 1 to 23459830)
  AUTHORS   Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
  CONSRTM   TAIR
  TITLE     Direct Submission
  JOURNAL   Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
            Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE   3  (bases 1 to 23459830)
  AUTHORS   Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
            Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
            Vaughn,M. and Town,C.D.
  TITLE     Direct Submission
  JOURNAL   Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
            9704 Medical Center Dr, Rockville, MD 20850, USA
  REMARK    Protein update by submitter
FEATURES             Qualifiers
     source          /organism="Arabidopsis thaliana"
                     /mol_type="genomic DNA"
                     /db_xref="taxon:3702"
                     /chromosome="3"
                     /ecotype="Columbia"
     protein         /locus_tag="AT3G52050"
                     /inference="Similar to RNA sequence,
                     EST:INSD:EL034090.1,INSD:ES015801.1,INSD:EL990763.1,
                     INSD:EH808539.1,INSD:ES192659.1,INSD:BX838252.1,
                     INSD:EL282109.1,INSD:BX835217.1,INSD:BP780923.1,
                     INSD:ES033330.1,INSD:ES145847.1,INSD:EL146421.1,
                     INSD:BX834657.1,INSD:EL262147.1,INSD:ES080496.1,
                     INSD:EL971067.1,INSD:AV566245.1"
                     /inference="Similar to RNA sequence, mRNA:INSD:BT026121.1"
                     /note="5'-3' exonuclease family protein; FUNCTIONS IN:
                     5'-3' exonuclease activity, DNA binding, catalytic
                     activity; LOCATED IN: mitochondrion; CONTAINS InterPro
                     DOMAIN/s: 5'-3' exonuclease, SAM-fold domain
                     (InterPro:IPR020047), 5'-3' exonuclease, N-terminal
                     (InterPro:IPR002421), 5'-3' exonuclease, C-terminal
                     subdomain (InterPro:IPR020045), 5'-3' exonuclease,
                     N-terminal resolvase-like domain (InterPro:IPR020046),
                     Helix-hairpin-helix motif, class 2 (InterPro:IPR008918);
                     BEST Arabidopsis thaliana protein match is: 5'-3'
                     exonuclease family protein (TAIR:AT1G34380.2); Has 9747
                     Blast hits to 9742 proteins in 2555 species: Archae - 3;
                     Bacteria - 6179; Metazoa - 6; Fungi - 13; Plants - 105;
                     Viruses - 31; Other Eukaryotes - 3410 (source: NCBI
                     BLink)."
                     /db_xref="TAIR:AT3G52050"
                     /db_xref="Araport:AT3G52050"
     intron_pos      43:0 (1/14)
     intron_pos      114:1 (2/14)
     intron_pos      141:0 (3/14)
     intron_pos      154:0 (4/14)
     intron_pos      160:1 (5/14)
     intron_pos      178:1 (6/14)
     intron_pos      221:0 (7/14)
     intron_pos      244:0 (8/14)
     intron_pos      272:2 (9/14)
     intron_pos      309:1 (10/14)
     intron_pos      326:1 (11/14)
     intron_pos      346:0 (12/14)
     intron_pos      361:0 (13/14)
     intron_pos      386:0 (14/14)
BEGIN
        1 MTLHLYHHSR FLWRNLCFPR SVGNLCNRNC SLISPSLARS AKYYCSSVAV SEFSNEAASG
       61 STLTSISEDV TPQSIKYPFK SEERVASTAA SSNGRVMLID GTSIIYRAYY KLLARLNHGH
      121 LAHADGNADW VLTIFSSLSL LIDVLKFLPS HVAVVFDHDG VPYGTTSNSS TGYRSAKGMN
      181 FRHTLYPAYK SNRPPTPDTI VQGLQYLKAS IKAMSIKVIE VPGVEADDVI GTLAMRSISA
      241 GFKVRVVSPD KDFFQILSPS LRLLRLTPRG SEMASFGMED FAKKFGNLEP AQFVDIIALA
      301 GDKSDNIPGV DGIGNVHAVE LISRFGTLEN LLQSVDEIKE GKIKESLIAS ADQAILSKKL
      361 ALLRSDLPDY IVPFDTKDLT FKKPEDNGEK LSSLLIAIAD YAEGFSADPV IRRAFRLWEK
      421 LEAVP
//