LOCUS AEE78343.1 1568 aa PRT PLN 23-MAR-2023 DEFINITION Arabidopsis thaliana Ubiquitin carboxyl-terminal hydrolase- related protein protein. ACCESSION CP002686-6556 PROTEIN_ID AEE78343.1 SOURCE Arabidopsis thaliana (thale cress) ORGANISM Arabidopsis thaliana Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis. REFERENCE 1 (bases 1 to 23459830) AUTHORS Salanoubat,M., Lemcke,K., Rieger,M., Ansorge,W., Unseld,M., Fartmann,B., Valle,G., Blocker,H., Perez-Alonso,M., Obermaier,B., Delseny,M., Boutry,M., Grivell,L.A., Mache,R., Puigdomenech,P., De Simone,V., Choisne,N., Artiguenave,F., Robert,C., Brottier,P., Wincker,P., Cattolico,L., Weissenbach,J., Saurin,W., Quetier,F., Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Benes,V., Wurmbach,E., Drzonek,H., Erfle,H., Jordan,N., Bangert,S., Wiedelmann,R., Kranz,H., Voss,H., Holland,R., Brandt,P., Nyakatura,G., Vezzi,A., D'Angelo,M., Pallavicini,A., Toppo,S., Simionati,B., Conrad,A., Hornischer,K., Kauer,G., Lohnert,T.H., Nordsiek,G., Reichelt,J., Scharfe,M., Schon,O., Bargues,M., Terol,J., Climent,J., Navarro,P., Collado,C., Perez-Perez,A., Ottenwalder,B., Duchemin,D., Cooke,R., Laudie,M., Berger-Llauro,C., Purnelle,B., Masuy,D., de Haan,M., Maarse,A.C., Alcaraz,J.P., Cottet,A., Casacuberta,E., Monfort,A., Argiriou,A., flores,M., Liguori,R., Vitale,D., Mannhaupt,G., Haase,D., Schoof,H., Rudd,S., Zaccaria,P., Mewes,H.W., Mayer,K.F., Kaul,S., Town,C.D., Koo,H.L., Tallon,L.J., Jenkins,J., Rooney,T., Rizzo,M., Walts,A., Utterback,T., Fujii,C.Y., Shea,T.P., Creasy,T.H., Haas,B., Maiti,R., Wu,D., Peterson,J., Van Aken,S., Pai,G., Militscher,J., Sellers,P., Gill,J.E., Feldblyum,T.V., Preuss,D., Lin,X., Nierman,W.C., Salzberg,S.L., White,O., Venter,J.C., Fraser,C.M., Kaneko,T., Nakamura,Y., Sato,S., Kato,T., Asamizu,E., Sasamoto,S., Kimura,T., Idesawa,K., Kawashima,K., Kishida,Y., Kiyokawa,C., Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S., Nakazaki,N., Shinpo,S., Takeuchi,C., Wada,T., Watanabe,A., Yamada,M., Yasuda,M. and Tabata,S. CONSRTM European Union Chromosome 3 Arabidopsis Sequencing Consortium; Institute for Genomic Research; Kazusa DNA Research Institute TITLE Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana JOURNAL Nature 408 (6814), 820-822 (2000) PUBMED 11130713 REFERENCE 2 (bases 1 to 23459830) AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E. CONSRTM TAIR TITLE Direct Submission JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie Institution, 260 Panama Street, Stanford, CA, USA REFERENCE 3 (bases 1 to 23459830) AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M., Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R., Vaughn,M. and Town,C.D. TITLE Direct Submission JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute, 9704 Medical Center Dr, Rockville, MD 20850, USA REMARK Protein update by submitter FEATURES Qualifiers source /organism="Arabidopsis thaliana" /mol_type="genomic DNA" /db_xref="taxon:3702" /chromosome="3" /ecotype="Columbia" protein /locus_tag="AT3G47890" /inference="Similar to RNA sequence, EST:INSD:EL318760.1,INSD:ES101125.1,INSD:AV523259.1, INSD:EG451479.1,INSD:ES205325.1,INSD:EL270290.1, INSD:EL323486.1,INSD:AV528739.1,INSD:AV564409.1, INSD:EL116563.1,INSD:ES136699.1,INSD:ES153376.1, INSD:ES206521.1,INSD:EL126267.1,INSD:AV807996.1, INSD:BU636190.1,INSD:EH880570.1,INSD:ES141149.1, INSD:BP780467.1,INSD:EH967293.1,INSD:ES067463.1, INSD:EL048772.1,INSD:BP790481.1,INSD:ES002449.1, INSD:EL253677.1,INSD:EG451478.1" /note="Ubiquitin carboxyl-terminal hydrolase-related protein; FUNCTIONS IN: ubiquitin thiolesterase activity, zinc ion binding; INVOLVED IN: ubiquitin-dependent protein catabolic process; LOCATED IN: intracellular; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF627 (InterPro:IPR006866), Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2 (InterPro:IPR001394), Zinc finger, C2H2-type (InterPro:IPR007087), Protein of unknown function DUF629 (InterPro:IPR006865); BEST Arabidopsis thaliana protein match is: Ubiquitin carboxyl-terminal hydrolase-related protein (TAIR:AT3G47910.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink)." /db_xref="TAIR:AT3G47890" /db_xref="Araport:AT3G47890" intron_pos 824:0 (1/14) intron_pos 867:0 (2/14) intron_pos 931:0 (3/14) intron_pos 947:2 (4/14) intron_pos 1052:0 (5/14) intron_pos 1094:1 (6/14) intron_pos 1161:1 (7/14) intron_pos 1193:1 (8/14) intron_pos 1254:0 (9/14) intron_pos 1326:0 (10/14) intron_pos 1418:0 (11/14) intron_pos 1467:1 (12/14) intron_pos 1512:0 (13/14) intron_pos 1541:0 (14/14) BEGIN 1 MGQKKKAPAP LDSALIKLEC EKALKSFGRG SYNKAIRLIK DSCSRHQDSA LIHRVQGTIC 61 VKVAAVYEDL ATKQKYLRNA IESARKAVEL SPDSIEFGHF YANLLYEAAN DGKREYDEVV 121 QECHRALSIE NPIDPAKESL QDETQLKILT PEARIVHVQD ELRSLIQKSN ISSLSTWMNN 181 LGKGEEKFRL IPIRRMAEDP IESNLVQTRR PNEIKKANKS IEEIRKEVEV RVAAARLLQQ 241 KSECENVGAV DNKGSDATLG SGKRSGERRK HGNARRNGST ADRRDRVKSY WDSMSKEMKK 301 QLLRVKLSDL KSHFSASKDG NENEIISEAL SFCEANKTWR FWVCCQCSEK FIKSEAYMHH 361 IVQVHMGNVL PKMQMVLPQS FDTERIDMLL TSPWKPLDLS AAVKWLRSRQ KIQNSEFSEF 421 HAGDNMDDGD DCFKDARNDT SPEKESLGDS CKGCDENDPE EGKLSITFPP PDGWPISDDP 481 ERAKLLEKIR AAFELLIRHK YLAASHHDKV IQFTLDELQN LASVSQFLNR SLNQSPICIC 541 FLGASQLRKI LKFLQDLSQA CGLSRYSEQS NPNDEFNFGA LCREVTEEIL LDGEDSCLLL 601 DEKLLGTECI QEIYMGSALH NVAVASSGDI ANGNDVSSGA DGFLSWIFTG PSSEEQVVSW 661 MRTKEEKTNQ GLEIMQHLEK EFYHLQNLCE RKCEHLSYEG ALQTVEDLCL EESRKRETSA 721 EFTHESYESV LRKRREELNE NDLELVFISS RFELDALTNV LKDAETLNHN QFGYEESYGC 781 TSSQLRDLES GEADEWGMKD SLHEADSFIE VAIQKQKEQL SAELSRIDAQ MMRNVTGMQQ 841 LELKLGPVSS NDYQIVLLPL VKSYMRAHLE ALAEKDATEK SDAAREALLF ELALDSKKEG 901 RGRNDNSKHT LEKSKDKKKI KDTRKLKNLK ATIGNDHRFN GDSIEHSLLS VASFGDHSEA 961 DVVSEAIEAL SDEEEEYRRC NELEEEERKL AKTLEYQRRI ENEAKEKHIA EQKKKYSCSD 1021 PMNVTEAVYD DCIENFFDDA DLQEQEKPIN QEKWNKQLDD LEGAKVNING VFPSTNHCVI 1081 SDTAKVLDVI SQEVVPNGIA IQAGVFQSDQ RPGRRGRRQK ASNKLVDGKY QVTLSESEDS 1141 KSQRSGTDSE RQSETLRSNG DAGPKTLRQL QAEDDEEERF QADLKRAKLQ SLDVYRGRRN 1201 MTSCLRTSLE DNNDWVLSDV TKESQSSPGV AIFGTGLQNE VGEYNCFLNV IIQSLWNLGM 1261 FRAEFLRSST LEHHHFGDPC VVCSLYAIFT ALSTASSETR KEPVAPSSLR IALSNLYPDS 1321 SFFQEAQMND ASEVLAVIFD CLHRSFAQSS SVSDTESAES NSTGSWDCAN RSCIAHSLFG 1381 MDVSEQLNCY SCGLESRHLK YTSFFHNINA SALRTMKVTC AENSFDELLN LVEMNHQLAC 1441 DREAGGCGKR NHIHHILTTP PHVFTIVLGW QNTCETVEDI AATLAALNTE IDISIMYRGV 1501 DPKNTYSLVS VVCYYGQHYH CFAYSHEHDQ WIMYDDQNVK VIGSWSDVLS MCKRGHLQPQ 1561 VLLYEKKL //