LOCUS AEE78249.1 245 aa PRT PLN 23-MAR-2023 DEFINITION Arabidopsis thaliana RING/U-box superfamily protein protein. ACCESSION CP002686-6431 PROTEIN_ID AEE78249.1 SOURCE Arabidopsis thaliana (thale cress) ORGANISM Arabidopsis thaliana Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis. REFERENCE 1 (bases 1 to 23459830) AUTHORS Salanoubat,M., Lemcke,K., Rieger,M., Ansorge,W., Unseld,M., Fartmann,B., Valle,G., Blocker,H., Perez-Alonso,M., Obermaier,B., Delseny,M., Boutry,M., Grivell,L.A., Mache,R., Puigdomenech,P., De Simone,V., Choisne,N., Artiguenave,F., Robert,C., Brottier,P., Wincker,P., Cattolico,L., Weissenbach,J., Saurin,W., Quetier,F., Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Benes,V., Wurmbach,E., Drzonek,H., Erfle,H., Jordan,N., Bangert,S., Wiedelmann,R., Kranz,H., Voss,H., Holland,R., Brandt,P., Nyakatura,G., Vezzi,A., D'Angelo,M., Pallavicini,A., Toppo,S., Simionati,B., Conrad,A., Hornischer,K., Kauer,G., Lohnert,T.H., Nordsiek,G., Reichelt,J., Scharfe,M., Schon,O., Bargues,M., Terol,J., Climent,J., Navarro,P., Collado,C., Perez-Perez,A., Ottenwalder,B., Duchemin,D., Cooke,R., Laudie,M., Berger-Llauro,C., Purnelle,B., Masuy,D., de Haan,M., Maarse,A.C., Alcaraz,J.P., Cottet,A., Casacuberta,E., Monfort,A., Argiriou,A., flores,M., Liguori,R., Vitale,D., Mannhaupt,G., Haase,D., Schoof,H., Rudd,S., Zaccaria,P., Mewes,H.W., Mayer,K.F., Kaul,S., Town,C.D., Koo,H.L., Tallon,L.J., Jenkins,J., Rooney,T., Rizzo,M., Walts,A., Utterback,T., Fujii,C.Y., Shea,T.P., Creasy,T.H., Haas,B., Maiti,R., Wu,D., Peterson,J., Van Aken,S., Pai,G., Militscher,J., Sellers,P., Gill,J.E., Feldblyum,T.V., Preuss,D., Lin,X., Nierman,W.C., Salzberg,S.L., White,O., Venter,J.C., Fraser,C.M., Kaneko,T., Nakamura,Y., Sato,S., Kato,T., Asamizu,E., Sasamoto,S., Kimura,T., Idesawa,K., Kawashima,K., Kishida,Y., Kiyokawa,C., Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S., Nakazaki,N., Shinpo,S., Takeuchi,C., Wada,T., Watanabe,A., Yamada,M., Yasuda,M. and Tabata,S. CONSRTM European Union Chromosome 3 Arabidopsis Sequencing Consortium; Institute for Genomic Research; Kazusa DNA Research Institute TITLE Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana JOURNAL Nature 408 (6814), 820-822 (2000) PUBMED 11130713 REFERENCE 2 (bases 1 to 23459830) AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E. CONSRTM TAIR TITLE Direct Submission JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie Institution, 260 Panama Street, Stanford, CA, USA REFERENCE 3 (bases 1 to 23459830) AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M., Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R., Vaughn,M. and Town,C.D. TITLE Direct Submission JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute, 9704 Medical Center Dr, Rockville, MD 20850, USA REMARK Protein update by submitter FEATURES Qualifiers source /organism="Arabidopsis thaliana" /mol_type="genomic DNA" /db_xref="taxon:3702" /chromosome="3" /ecotype="Columbia" protein /locus_tag="AT3G47160" /inference="Similar to RNA sequence, EST:INSD:EL229842.1,INSD:EL147942.1,INSD:ES187517.1, INSD:EH930279.1,INSD:CF651882.1,INSD:AI993588.1, INSD:AV809765.1,INSD:ES105493.1,INSD:DR268619.1, INSD:DR268617.1,INSD:EL115596.1,INSD:N97154.1, INSD:ES183747.1,INSD:EL989050.1,INSD:BP859843.1, INSD:DR268616.1,INSD:BP602550.1,INSD:ES129001.1, INSD:DR268618.1,INSD:ES005927.1,INSD:AV830047.1, INSD:BP864946.1,INSD:ES070603.1,INSD:BP851827.1, INSD:ES001143.1,INSD:ES181774.1,INSD:DR268621.1, INSD:ES047232.1,INSD:DR371574.1,INSD:ES077628.1, INSD:DR268622.1,INSD:EL340508.1,INSD:EL041672.1, INSD:EL120314.1,INSD:EH828112.1,INSD:DR268620.1, INSD:T45931.1,INSD:H37161.1,INSD:EH874273.1, INSD:EH884494.1,INSD:AV557901.1,INSD:EL294738.1, INSD:BP614029.1,INSD:EL054612.1,INSD:EL247373.1, INSD:EL040620.1,INSD:ES135562.1,INSD:ES045623.1" /inference="Similar to RNA sequence, mRNA:INSD:AY088865.1,INSD:AY099618.1,INSD:BT002136.1, INSD:DQ086845.1" /note="RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type, conserved site (InterPro:IPR017907), Zinc finger, RING-type (InterPro:IPR001841); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT5G58787.1); Has 1132 Blast hits to 1132 proteins in 162 species: Archae - 0; Bacteria - 0; Metazoa - 465; Fungi - 45; Plants - 326; Viruses - 118; Other Eukaryotes - 178 (source: NCBI BLink)." /db_xref="TAIR:AT3G47160" /db_xref="Araport:AT3G47160" intron_pos 23:2 (1/4) intron_pos 74:0 (2/4) intron_pos 96:1 (3/4) intron_pos 174:2 (4/4) BEGIN 1 MAKVSFKDSL KALEADIQHA NTVALDYPRE KDGARVQMRL SYTPAAQFLL FLVQWTDCHL 61 AGTLGLLRVL IYMTYADGKT TMSVYERKTS IKDFYAVIFP SLLQLERGIT DLDDRKQKEV 121 CKIRYRNKDE TEKVKLSEID IEREEECGIC MEMNNMVVLP NCTHSLCIKC YRDWHGRSES 181 CPFCRDSLKR VNSGDLWMLM EKSDTVNMYT IERENKKRLF VYIEKLPLVV PDQVFASSPY 241 DCHVK //