LOCUS       AEE78174.1               182 aa    PRT              PLN 23-MAR-2023
DEFINITION  Arabidopsis thaliana methyl-CPG-binding domain protein 5 protein.
ACCESSION   CP002686-6324
PROTEIN_ID  AEE78174.1
SOURCE      Arabidopsis thaliana (thale cress)
  ORGANISM  Arabidopsis thaliana
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
            Camelineae; Arabidopsis.
REFERENCE   1  (bases 1 to 23459830)
  AUTHORS   Salanoubat,M., Lemcke,K., Rieger,M., Ansorge,W., Unseld,M.,
            Fartmann,B., Valle,G., Blocker,H., Perez-Alonso,M., Obermaier,B.,
            Delseny,M., Boutry,M., Grivell,L.A., Mache,R., Puigdomenech,P., De
            Simone,V., Choisne,N., Artiguenave,F., Robert,C., Brottier,P.,
            Wincker,P., Cattolico,L., Weissenbach,J., Saurin,W., Quetier,F.,
            Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Benes,V.,
            Wurmbach,E., Drzonek,H., Erfle,H., Jordan,N., Bangert,S.,
            Wiedelmann,R., Kranz,H., Voss,H., Holland,R., Brandt,P.,
            Nyakatura,G., Vezzi,A., D'Angelo,M., Pallavicini,A., Toppo,S.,
            Simionati,B., Conrad,A., Hornischer,K., Kauer,G., Lohnert,T.H.,
            Nordsiek,G., Reichelt,J., Scharfe,M., Schon,O., Bargues,M.,
            Terol,J., Climent,J., Navarro,P., Collado,C., Perez-Perez,A.,
            Ottenwalder,B., Duchemin,D., Cooke,R., Laudie,M., Berger-Llauro,C.,
            Purnelle,B., Masuy,D., de Haan,M., Maarse,A.C., Alcaraz,J.P.,
            Cottet,A., Casacuberta,E., Monfort,A., Argiriou,A., flores,M.,
            Liguori,R., Vitale,D., Mannhaupt,G., Haase,D., Schoof,H., Rudd,S.,
            Zaccaria,P., Mewes,H.W., Mayer,K.F., Kaul,S., Town,C.D., Koo,H.L.,
            Tallon,L.J., Jenkins,J., Rooney,T., Rizzo,M., Walts,A.,
            Utterback,T., Fujii,C.Y., Shea,T.P., Creasy,T.H., Haas,B.,
            Maiti,R., Wu,D., Peterson,J., Van Aken,S., Pai,G., Militscher,J.,
            Sellers,P., Gill,J.E., Feldblyum,T.V., Preuss,D., Lin,X.,
            Nierman,W.C., Salzberg,S.L., White,O., Venter,J.C., Fraser,C.M.,
            Kaneko,T., Nakamura,Y., Sato,S., Kato,T., Asamizu,E., Sasamoto,S.,
            Kimura,T., Idesawa,K., Kawashima,K., Kishida,Y., Kiyokawa,C.,
            Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
            Nakazaki,N., Shinpo,S., Takeuchi,C., Wada,T., Watanabe,A.,
            Yamada,M., Yasuda,M. and Tabata,S.
  CONSRTM   European Union Chromosome 3 Arabidopsis Sequencing Consortium;
            Institute for Genomic Research; Kazusa DNA Research Institute
  TITLE     Sequence and analysis of chromosome 3 of the plant Arabidopsis
            thaliana
  JOURNAL   Nature 408 (6814), 820-822 (2000)
   PUBMED   11130713
REFERENCE   2  (bases 1 to 23459830)
  AUTHORS   Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
  CONSRTM   TAIR
  TITLE     Direct Submission
  JOURNAL   Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
            Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE   3  (bases 1 to 23459830)
  AUTHORS   Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
            Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
            Vaughn,M. and Town,C.D.
  TITLE     Direct Submission
  JOURNAL   Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
            9704 Medical Center Dr, Rockville, MD 20850, USA
  REMARK    Protein update by submitter
FEATURES             Qualifiers
     source          /organism="Arabidopsis thaliana"
                     /mol_type="genomic DNA"
                     /db_xref="taxon:3702"
                     /chromosome="3"
                     /ecotype="Columbia"
     protein         /gene="MBD5"
                     /locus_tag="AT3G46580"
                     /gene_synonym="ATMBD5"
                     /gene_synonym="MBD05"
                     /gene_synonym="MDB05"
                     /gene_synonym="METHYL-CPG-BINDING DOMAIN PROTEIN 05"
                     /gene_synonym="methyl-CPG-binding domain protein 5"
                     /inference="Similar to RNA sequence,
                     EST:INSD:EL068443.1,INSD:EL208624.1,INSD:EG479394.1,
                     INSD:EG479392.1,INSD:AV788775.1,INSD:EG479406.1,
                     INSD:EH803977.1,INSD:EL996068.1,INSD:BP561338.1,
                     INSD:DR295841.1,INSD:EL215908.1,INSD:BP591927.1"
                     /inference="Similar to RNA sequence,
                     mRNA:INSD:AY142653.1,INSD:AY086606.1,INSD:AY063849.1,
                     INSD:BX825396.1"
                     /note="methyl-CPG-binding domain protein 5 (MBD5);
                     FUNCTIONS IN: methyl-CpG binding, DNA binding; INVOLVED
                     IN: biological_process unknown; LOCATED IN: perinucleolar
                     chromocenter; EXPRESSED IN: 20 plant structures; EXPRESSED
                     DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s:
                     DNA-binding, integrase-type (InterPro:IPR016177),
                     Methyl-CpG DNA binding (InterPro:IPR001739); BEST
                     Arabidopsis thaliana protein match is: methyl-CPG-binding
                     domain 6 (TAIR:AT5G59380.1); Has 120 Blast hits to 118
                     proteins in 32 species: Archae - 0; Bacteria - 0; Metazoa
                     - 64; Fungi - 4; Plants - 49; Viruses - 0; Other
                     Eukaryotes - 3 (source: NCBI BLink)."
                     /db_xref="TAIR:AT3G46580"
                     /db_xref="Araport:AT3G46580"
     intron_pos      58:0 (1/2)
     intron_pos      100:0 (2/2)
BEGIN
        1 MSNGTDQAQP PPENPATPVD SKSRKRATPG DDNWLPPDWR TEIRVRTSGT KAGTVDKFYY
       61 EPITGRKFRS KNEVLYYLEH GTPKKKSVKT AENGDSHSEH SEGRGSARRQ TKSNKKVTEP
      121 PPKPLNFDFL NVPEKVTWTG INGSEEAWLP FIGDYKIQES VSQDWDRVFT LVTSQNAGKT
      181 MF
//