LOCUS AEE76370.1 379 aa PRT PLN 23-MAR-2023 DEFINITION Arabidopsis thaliana TRAF-like family protein protein. ACCESSION CP002686-3838 PROTEIN_ID AEE76370.1 SOURCE Arabidopsis thaliana (thale cress) ORGANISM Arabidopsis thaliana Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis. REFERENCE 1 (bases 1 to 23459830) AUTHORS Salanoubat,M., Lemcke,K., Rieger,M., Ansorge,W., Unseld,M., Fartmann,B., Valle,G., Blocker,H., Perez-Alonso,M., Obermaier,B., Delseny,M., Boutry,M., Grivell,L.A., Mache,R., Puigdomenech,P., De Simone,V., Choisne,N., Artiguenave,F., Robert,C., Brottier,P., Wincker,P., Cattolico,L., Weissenbach,J., Saurin,W., Quetier,F., Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Benes,V., Wurmbach,E., Drzonek,H., Erfle,H., Jordan,N., Bangert,S., Wiedelmann,R., Kranz,H., Voss,H., Holland,R., Brandt,P., Nyakatura,G., Vezzi,A., D'Angelo,M., Pallavicini,A., Toppo,S., Simionati,B., Conrad,A., Hornischer,K., Kauer,G., Lohnert,T.H., Nordsiek,G., Reichelt,J., Scharfe,M., Schon,O., Bargues,M., Terol,J., Climent,J., Navarro,P., Collado,C., Perez-Perez,A., Ottenwalder,B., Duchemin,D., Cooke,R., Laudie,M., Berger-Llauro,C., Purnelle,B., Masuy,D., de Haan,M., Maarse,A.C., Alcaraz,J.P., Cottet,A., Casacuberta,E., Monfort,A., Argiriou,A., flores,M., Liguori,R., Vitale,D., Mannhaupt,G., Haase,D., Schoof,H., Rudd,S., Zaccaria,P., Mewes,H.W., Mayer,K.F., Kaul,S., Town,C.D., Koo,H.L., Tallon,L.J., Jenkins,J., Rooney,T., Rizzo,M., Walts,A., Utterback,T., Fujii,C.Y., Shea,T.P., Creasy,T.H., Haas,B., Maiti,R., Wu,D., Peterson,J., Van Aken,S., Pai,G., Militscher,J., Sellers,P., Gill,J.E., Feldblyum,T.V., Preuss,D., Lin,X., Nierman,W.C., Salzberg,S.L., White,O., Venter,J.C., Fraser,C.M., Kaneko,T., Nakamura,Y., Sato,S., Kato,T., Asamizu,E., Sasamoto,S., Kimura,T., Idesawa,K., Kawashima,K., Kishida,Y., Kiyokawa,C., Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S., Nakazaki,N., Shinpo,S., Takeuchi,C., Wada,T., Watanabe,A., Yamada,M., Yasuda,M. and Tabata,S. CONSRTM European Union Chromosome 3 Arabidopsis Sequencing Consortium; Institute for Genomic Research; Kazusa DNA Research Institute TITLE Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana JOURNAL Nature 408 (6814), 820-822 (2000) PUBMED 11130713 REFERENCE 2 (bases 1 to 23459830) AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E. CONSRTM TAIR TITLE Direct Submission JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie Institution, 260 Panama Street, Stanford, CA, USA REFERENCE 3 (bases 1 to 23459830) AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M., Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R., Vaughn,M. and Town,C.D. TITLE Direct Submission JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute, 9704 Medical Center Dr, Rockville, MD 20850, USA REMARK Protein update by submitter FEATURES Qualifiers source /organism="Arabidopsis thaliana" /mol_type="genomic DNA" /db_xref="taxon:3702" /chromosome="3" /ecotype="Columbia" protein /locus_tag="AT3G20370" /inference="Similar to RNA sequence, EST:INSD:EH989541.1,INSD:EH850113.1,INSD:EH924318.1, INSD:EL152920.1,INSD:BP576915.1,INSD:EL231178.1, INSD:EL252992.1,INSD:EL067067.1,INSD:DR242781.1, INSD:DR287297.1,INSD:EL315548.1,INSD:EL043119.1, INSD:DR287294.1,INSD:EH976758.1,INSD:AV794079.1, INSD:AV820158.1,INSD:H76243.1,INSD:EL250926.1, INSD:EL008333.1,INSD:T45374.1,INSD:BP847916.1, INSD:EH899301.1,INSD:BP570342.1,INSD:EH942127.1, INSD:EL319705.1,INSD:DR379925.1,INSD:DR242783.1, INSD:AV521997.1,INSD:EH805095.1,INSD:DR287285.1, INSD:EH814222.1,INSD:BP853868.1,INSD:AI099971.1, INSD:EH961956.1,INSD:DR378373.1,INSD:EH941893.1, INSD:EL246805.1,INSD:EL025510.1,INSD:EL272087.1, INSD:EL170496.1,INSD:EH892378.1,INSD:EL297210.1, INSD:DR287287.1,INSD:N38694.1,INSD:BP577220.1, INSD:EL034372.1,INSD:DR287286.1,INSD:EL096492.1, INSD:EG458675.1,INSD:BP579370.1,INSD:H76888.1, INSD:EL305739.1,INSD:EH922565.1,INSD:DR287292.1, INSD:F19873.1,INSD:EL146685.1,INSD:EL200022.1, INSD:T45377.1,INSD:EL075361.1,INSD:AV823021.1, INSD:DR195312.1,INSD:AA067519.1,INSD:EL053958.1, INSD:EL047524.1,INSD:AI992740.1,INSD:DR242785.1, INSD:AV783913.1,INSD:DR287290.1,INSD:DR287289.1, INSD:DR282013.1,INSD:DR287295.1,INSD:EH807252.1, INSD:EL051367.1,INSD:AV540340.1,INSD:EH984100.1, INSD:DR195311.1,INSD:AV793984.1,INSD:DR376644.1, INSD:EL076147.1,INSD:DR242782.1,INSD:DR287296.1, INSD:CF652303.1,INSD:EL226199.1,INSD:DR287288.1, INSD:DR287293.1,INSD:DR287299.1,INSD:EH935682.1, INSD:DR195313.1,INSD:EH986554.1,INSD:CB263123.1, INSD:EL269505.1,INSD:CF652302.1,INSD:EH844096.1, INSD:AI993266.1,INSD:EH988868.1,INSD:F15496.1, INSD:DR242784.1,INSD:EL116217.1,INSD:BP584862.1, INSD:DR287291.1" /inference="Similar to RNA sequence, mRNA:INSD:AY097389.1,INSD:AY074866.1,INSD:AY088016.1" /note="TRAF-like family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: membrane; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: seedling growth; CONTAINS InterPro DOMAIN/s: TRAF-like (InterPro:IPR008974), MATH (InterPro:IPR002083); BEST Arabidopsis thaliana protein match is: TRAF-like family protein (TAIR:AT3G20360.1); Has 795 Blast hits to 651 proteins in 57 species: Archae - 0; Bacteria - 0; Metazoa - 86; Fungi - 10; Plants - 671; Viruses - 0; Other Eukaryotes - 28 (source: NCBI BLink)." /db_xref="TAIR:AT3G20370" /db_xref="Araport:AT3G20370" intron_pos 42:1 (1/5) intron_pos 119:2 (2/5) intron_pos 174:1 (3/5) intron_pos 268:2 (4/5) intron_pos 324:1 (5/5) BEGIN 1 MASHYRNTSA IAYLLLCLFI TSATAHSFIR QITDDLKTNL QQEVGAEPIQ NLDVGHYLQE 61 NKEISSRDYK VSASNAVKGL RDRPPSSYSL KMESFNTLLK STYTEKYVSR PFSVGGYNWT 121 LVVFPNGNKK DSGSGYLSLY VAIDNSTLGQ QEIYADLRFY IFNKNERKYF TIQDTDVWKF 181 SVFKTMWGFS QVLPIDTFKD PTKGYLYDGD HCEFGVDVTM PSLYEKSELF SVTENFLNPR 241 FTWTIRGFST LLKNSYLSEV FSIGGRSWNI QINPSGLGTG EGKALSMYLG LNVNEIFRPY 301 EKIYVRAKLR ALNQLNLSNI ERELDIWYNG PGYGEYSWGF PEFIYFPYLT DSSKGFVKND 361 VLMVQVEMEA ISSTKYFPS //