LOCUS AEE76041.1 609 aa PRT PLN 23-MAR-2023 DEFINITION Arabidopsis thaliana transducin family protein / WD-40 repeat family protein protein. ACCESSION CP002686-3368 PROTEIN_ID AEE76041.1 SOURCE Arabidopsis thaliana (thale cress) ORGANISM Arabidopsis thaliana Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis. REFERENCE 1 (bases 1 to 23459830) AUTHORS Salanoubat,M., Lemcke,K., Rieger,M., Ansorge,W., Unseld,M., Fartmann,B., Valle,G., Blocker,H., Perez-Alonso,M., Obermaier,B., Delseny,M., Boutry,M., Grivell,L.A., Mache,R., Puigdomenech,P., De Simone,V., Choisne,N., Artiguenave,F., Robert,C., Brottier,P., Wincker,P., Cattolico,L., Weissenbach,J., Saurin,W., Quetier,F., Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Benes,V., Wurmbach,E., Drzonek,H., Erfle,H., Jordan,N., Bangert,S., Wiedelmann,R., Kranz,H., Voss,H., Holland,R., Brandt,P., Nyakatura,G., Vezzi,A., D'Angelo,M., Pallavicini,A., Toppo,S., Simionati,B., Conrad,A., Hornischer,K., Kauer,G., Lohnert,T.H., Nordsiek,G., Reichelt,J., Scharfe,M., Schon,O., Bargues,M., Terol,J., Climent,J., Navarro,P., Collado,C., Perez-Perez,A., Ottenwalder,B., Duchemin,D., Cooke,R., Laudie,M., Berger-Llauro,C., Purnelle,B., Masuy,D., de Haan,M., Maarse,A.C., Alcaraz,J.P., Cottet,A., Casacuberta,E., Monfort,A., Argiriou,A., flores,M., Liguori,R., Vitale,D., Mannhaupt,G., Haase,D., Schoof,H., Rudd,S., Zaccaria,P., Mewes,H.W., Mayer,K.F., Kaul,S., Town,C.D., Koo,H.L., Tallon,L.J., Jenkins,J., Rooney,T., Rizzo,M., Walts,A., Utterback,T., Fujii,C.Y., Shea,T.P., Creasy,T.H., Haas,B., Maiti,R., Wu,D., Peterson,J., Van Aken,S., Pai,G., Militscher,J., Sellers,P., Gill,J.E., Feldblyum,T.V., Preuss,D., Lin,X., Nierman,W.C., Salzberg,S.L., White,O., Venter,J.C., Fraser,C.M., Kaneko,T., Nakamura,Y., Sato,S., Kato,T., Asamizu,E., Sasamoto,S., Kimura,T., Idesawa,K., Kawashima,K., Kishida,Y., Kiyokawa,C., Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S., Nakazaki,N., Shinpo,S., Takeuchi,C., Wada,T., Watanabe,A., Yamada,M., Yasuda,M. and Tabata,S. CONSRTM European Union Chromosome 3 Arabidopsis Sequencing Consortium; Institute for Genomic Research; Kazusa DNA Research Institute TITLE Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana JOURNAL Nature 408 (6814), 820-822 (2000) PUBMED 11130713 REFERENCE 2 (bases 1 to 23459830) AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E. CONSRTM TAIR TITLE Direct Submission JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie Institution, 260 Panama Street, Stanford, CA, USA REFERENCE 3 (bases 1 to 23459830) AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M., Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R., Vaughn,M. and Town,C.D. TITLE Direct Submission JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute, 9704 Medical Center Dr, Rockville, MD 20850, USA REMARK Protein update by submitter FEATURES Qualifiers source /organism="Arabidopsis thaliana" /mol_type="genomic DNA" /db_xref="taxon:3702" /chromosome="3" /ecotype="Columbia" protein /locus_tag="AT3G18060" /inference="Similar to RNA sequence, EST:INSD:BP567208.1,INSD:EL048691.1,INSD:EL011475.1, INSD:AI996886.1,INSD:EH844293.1,INSD:EH858215.1, INSD:EL337073.1,INSD:BP651416.1,INSD:BP665508.1, INSD:BP781015.1,INSD:BP807019.1,INSD:DR224905.1, INSD:BP858098.1,INSD:EL166825.1,INSD:EL168514.1, INSD:BP833156.1,INSD:EH991294.1,INSD:BP656445.1, INSD:BP788575.1,INSD:EH847455.1,INSD:EL108388.1, INSD:BP605781.1,INSD:BP780141.1,INSD:EL196462.1, INSD:Z26104.1,INSD:BP816927.1,INSD:BP815869.1, INSD:BP592417.1,INSD:EH843884.1,INSD:EH987877.1, INSD:BP790866.1,INSD:EL170108.1,INSD:ES211944.1, INSD:BP800192.1,INSD:EG513060.1,INSD:Z25585.1, INSD:EH972062.1,INSD:BP578581.1,INSD:DR371527.1, INSD:BP650016.1,INSD:EL275139.1,INSD:BP666088.1, INSD:EH842746.1,INSD:EG513061.1,INSD:BP823408.1, INSD:EL212230.1,INSD:BP586958.1,INSD:BP610160.1, INSD:EH831001.1,INSD:AV551848.1,INSD:ES173437.1, INSD:BP657774.1,INSD:EL967092.1,INSD:EL985010.1, INSD:AV791680.1,INSD:BP792227.1,INSD:BP592107.1, INSD:AV829373.1,INSD:EL213820.1,INSD:AV825595.1, INSD:BP565401.1,INSD:BP592073.1,INSD:EL208080.1, INSD:EH817119.1,INSD:AV805828.1,INSD:BP645982.1, INSD:Z18423.1,INSD:BP778331.1,INSD:EL330209.1, INSD:EL121461.1,INSD:BP646019.1" /inference="Similar to RNA sequence, mRNA:INSD:AY114624.1,INSD:AY062436.1" /note="transducin family protein / WD-40 repeat family protein; FUNCTIONS IN: nucleotide binding; INVOLVED IN: biological_process unknown; LOCATED IN: CUL4 RING ubiquitin ligase complex; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), Nitrous oxide reductase, N-terminal (InterPro:IPR011045), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: nucleotide binding (TAIR:AT2G01330.2); Has 46825 Blast hits to 21434 proteins in 724 species: Archae - 58; Bacteria - 7760; Metazoa - 18076; Fungi - 9371; Plants - 5681; Viruses - 0; Other Eukaryotes - 5879 (source: NCBI BLink)." /db_xref="TAIR:AT3G18060" /db_xref="Araport:AT3G18060" intron_pos 130:2 (1/5) intron_pos 184:2 (2/5) intron_pos 247:0 (3/5) intron_pos 389:0 (4/5) intron_pos 525:0 (5/5) BEGIN 1 MELSETYACV PSTERGRGIL ISGNSKSDTI LYTNGRSVVT LDLNNPLKVS IYGEHAYPAT 61 VARYSPNGEW IASGDVSGTV RIWGAYNDHV LKNEFKVLAG RIDDLQWSAD GMRIVASGDG 121 KGKSLVRAFM WDSGSNVGEF DGHSRRVLSC AIKPTRPFRI VTCGEDFLVN FYEGPPFKFK 181 LSSREHSNFV NCVRFAPDGS KFITVSSDKK GIIYDGKTCE ILGELSSDDG HKGSIYAVSW 241 SPDGKQVLTV SADKSAKIWD ISDNGSGSLN TTLNCPGSSG GVDDMLVGCL WQNDHIVTVS 301 LGGTISIFSA SDLDKSPFQF SGHMKNVSSL AVLKGNADYI LSGSYDGLIC KWMLGRGFCG 361 KLQRTQNSQI KCFAAHEEEI VTSGYDNKIS RISYKDDQCT NEESIDIGNQ PKDLSLAPLS 421 PDLLLVTFES GVVFLRDGKV VSTINLGFIV TALAVTPDGT EAVIGGQDGK LHLYSINGDS 481 LTEEAVLERH RGAISVIRYS PDLSMFASAD LNREAVVWDR VSREMKLKNM LYHSARINCL 541 AWSPNSTMVA TGSLDTCVIV YEVDKPASSR MTIKGAHLGG VYGLGFADDS HVVSSGEDAC 601 IRVWSFTPQ //