LOCUS       AEE75787.1               449 aa    PRT              PLN 23-MAR-2023
DEFINITION  Arabidopsis thaliana Putative eukaryotic LigT protein.
ACCESSION   CP002686-3016
PROTEIN_ID  AEE75787.1
SOURCE      Arabidopsis thaliana (thale cress)
  ORGANISM  Arabidopsis thaliana
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
            Camelineae; Arabidopsis.
REFERENCE   1  (bases 1 to 23459830)
  AUTHORS   Salanoubat,M., Lemcke,K., Rieger,M., Ansorge,W., Unseld,M.,
            Fartmann,B., Valle,G., Blocker,H., Perez-Alonso,M., Obermaier,B.,
            Delseny,M., Boutry,M., Grivell,L.A., Mache,R., Puigdomenech,P., De
            Simone,V., Choisne,N., Artiguenave,F., Robert,C., Brottier,P.,
            Wincker,P., Cattolico,L., Weissenbach,J., Saurin,W., Quetier,F.,
            Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Benes,V.,
            Wurmbach,E., Drzonek,H., Erfle,H., Jordan,N., Bangert,S.,
            Wiedelmann,R., Kranz,H., Voss,H., Holland,R., Brandt,P.,
            Nyakatura,G., Vezzi,A., D'Angelo,M., Pallavicini,A., Toppo,S.,
            Simionati,B., Conrad,A., Hornischer,K., Kauer,G., Lohnert,T.H.,
            Nordsiek,G., Reichelt,J., Scharfe,M., Schon,O., Bargues,M.,
            Terol,J., Climent,J., Navarro,P., Collado,C., Perez-Perez,A.,
            Ottenwalder,B., Duchemin,D., Cooke,R., Laudie,M., Berger-Llauro,C.,
            Purnelle,B., Masuy,D., de Haan,M., Maarse,A.C., Alcaraz,J.P.,
            Cottet,A., Casacuberta,E., Monfort,A., Argiriou,A., flores,M.,
            Liguori,R., Vitale,D., Mannhaupt,G., Haase,D., Schoof,H., Rudd,S.,
            Zaccaria,P., Mewes,H.W., Mayer,K.F., Kaul,S., Town,C.D., Koo,H.L.,
            Tallon,L.J., Jenkins,J., Rooney,T., Rizzo,M., Walts,A.,
            Utterback,T., Fujii,C.Y., Shea,T.P., Creasy,T.H., Haas,B.,
            Maiti,R., Wu,D., Peterson,J., Van Aken,S., Pai,G., Militscher,J.,
            Sellers,P., Gill,J.E., Feldblyum,T.V., Preuss,D., Lin,X.,
            Nierman,W.C., Salzberg,S.L., White,O., Venter,J.C., Fraser,C.M.,
            Kaneko,T., Nakamura,Y., Sato,S., Kato,T., Asamizu,E., Sasamoto,S.,
            Kimura,T., Idesawa,K., Kawashima,K., Kishida,Y., Kiyokawa,C.,
            Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
            Nakazaki,N., Shinpo,S., Takeuchi,C., Wada,T., Watanabe,A.,
            Yamada,M., Yasuda,M. and Tabata,S.
  CONSRTM   European Union Chromosome 3 Arabidopsis Sequencing Consortium;
            Institute for Genomic Research; Kazusa DNA Research Institute
  TITLE     Sequence and analysis of chromosome 3 of the plant Arabidopsis
            thaliana
  JOURNAL   Nature 408 (6814), 820-822 (2000)
   PUBMED   11130713
REFERENCE   2  (bases 1 to 23459830)
  AUTHORS   Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
  CONSRTM   TAIR
  TITLE     Direct Submission
  JOURNAL   Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
            Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE   3  (bases 1 to 23459830)
  AUTHORS   Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
            Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
            Vaughn,M. and Town,C.D.
  TITLE     Direct Submission
  JOURNAL   Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
            9704 Medical Center Dr, Rockville, MD 20850, USA
  REMARK    Protein update by submitter
FEATURES             Qualifiers
     source          /organism="Arabidopsis thaliana"
                     /mol_type="genomic DNA"
                     /db_xref="taxon:3702"
                     /chromosome="3"
                     /ecotype="Columbia"
     protein         /locus_tag="AT3G16230"
                     /note="Predicted eukaryotic LigT; FUNCTIONS IN: RNA
                     binding, catalytic activity; INVOLVED IN: RNA metabolic
                     process, regulation of transcription; LOCATED IN:
                     mitochondrion; EXPRESSED IN: 22 plant structures;
                     EXPRESSED DURING: 13 growth stages; CONTAINS InterPro
                     DOMAIN/s: K Homology, type 1, subgroup
                     (InterPro:IPR018111), K Homology (InterPro:IPR004087), K
                     Homology, type 1 (InterPro:IPR004088), Predicted
                     eukaryotic LigT (InterPro:IPR009210), RNA ligase/cyclic
                     nucleotide phosphodiesterase (InterPro:IPR009097), Protein
                     kinase A anchor protein, nuclear localisation signal
                     domain (InterPro:IPR019510); BEST Arabidopsis thaliana
                     protein match is: Predicted eukaryotic LigT
                     (TAIR:AT3G16220.1)."
                     /db_xref="TAIR:AT3G16230"
                     /db_xref="Araport:AT3G16230"
     intron_pos      9:2 (1/13)
     intron_pos      26:0 (2/13)
     intron_pos      67:1 (3/13)
     intron_pos      108:0 (4/13)
     intron_pos      120:2 (5/13)
     intron_pos      147:1 (6/13)
     intron_pos      170:0 (7/13)
     intron_pos      263:1 (8/13)
     intron_pos      301:0 (9/13)
     intron_pos      323:0 (10/13)
     intron_pos      353:1 (11/13)
     intron_pos      376:0 (12/13)
     intron_pos      389:2 (13/13)
BEGIN
        1 MFAYRTLFRI DRVFGFTSRC FQSKPESFSI LSFRGSEKSA MDGYKKQKMV NLVWRPISTQ
       61 TSSVIAEAGN EVQEVAQCSK SSDVSKEVIE GETASVVSAG KHSVSLEVGA SLIKFIRGKE
      121 GTTQMKLEEE MGVKIILPSS RNKDHISIEG GSVDCVTKAS KRIATIIDEV VRSPSLDYSH
      181 FVSLPLAIHP ELVDKLVNFQ NSILGIHSIA SDKQDDQANR ATTSVAVDLK ANSETNQVNV
      241 GIKSIPIVSY PPKAKSKSST LLDLGIEKSI FIKPSTFHLT VVMLKLWNKD RVNAACDVLK
      301 SIFPSVMDAL DNKPVFIRLK GLDCMRGPLD KTRVLYAPVE EIGDEGRLLR ACQVITDAFV
      361 KAGLVLEKDA KQSLKLHVTV MNARHRKRRK NNKKKMETFD AREIHKQFGN EDWGEYLIQE
      421 AHLSQRFVFD QNGYYRCCGS IPFPGEQRA
//