LOCUS       AEE74609.1               397 aa    PRT              PLN 23-MAR-2023
DEFINITION  Arabidopsis thaliana Pectin lyase-like superfamily protein protein.
ACCESSION   CP002686-1409
PROTEIN_ID  AEE74609.1
SOURCE      Arabidopsis thaliana (thale cress)
  ORGANISM  Arabidopsis thaliana
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
            Camelineae; Arabidopsis.
REFERENCE   1  (bases 1 to 23459830)
  AUTHORS   Salanoubat,M., Lemcke,K., Rieger,M., Ansorge,W., Unseld,M.,
            Fartmann,B., Valle,G., Blocker,H., Perez-Alonso,M., Obermaier,B.,
            Delseny,M., Boutry,M., Grivell,L.A., Mache,R., Puigdomenech,P., De
            Simone,V., Choisne,N., Artiguenave,F., Robert,C., Brottier,P.,
            Wincker,P., Cattolico,L., Weissenbach,J., Saurin,W., Quetier,F.,
            Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Benes,V.,
            Wurmbach,E., Drzonek,H., Erfle,H., Jordan,N., Bangert,S.,
            Wiedelmann,R., Kranz,H., Voss,H., Holland,R., Brandt,P.,
            Nyakatura,G., Vezzi,A., D'Angelo,M., Pallavicini,A., Toppo,S.,
            Simionati,B., Conrad,A., Hornischer,K., Kauer,G., Lohnert,T.H.,
            Nordsiek,G., Reichelt,J., Scharfe,M., Schon,O., Bargues,M.,
            Terol,J., Climent,J., Navarro,P., Collado,C., Perez-Perez,A.,
            Ottenwalder,B., Duchemin,D., Cooke,R., Laudie,M., Berger-Llauro,C.,
            Purnelle,B., Masuy,D., de Haan,M., Maarse,A.C., Alcaraz,J.P.,
            Cottet,A., Casacuberta,E., Monfort,A., Argiriou,A., flores,M.,
            Liguori,R., Vitale,D., Mannhaupt,G., Haase,D., Schoof,H., Rudd,S.,
            Zaccaria,P., Mewes,H.W., Mayer,K.F., Kaul,S., Town,C.D., Koo,H.L.,
            Tallon,L.J., Jenkins,J., Rooney,T., Rizzo,M., Walts,A.,
            Utterback,T., Fujii,C.Y., Shea,T.P., Creasy,T.H., Haas,B.,
            Maiti,R., Wu,D., Peterson,J., Van Aken,S., Pai,G., Militscher,J.,
            Sellers,P., Gill,J.E., Feldblyum,T.V., Preuss,D., Lin,X.,
            Nierman,W.C., Salzberg,S.L., White,O., Venter,J.C., Fraser,C.M.,
            Kaneko,T., Nakamura,Y., Sato,S., Kato,T., Asamizu,E., Sasamoto,S.,
            Kimura,T., Idesawa,K., Kawashima,K., Kishida,Y., Kiyokawa,C.,
            Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
            Nakazaki,N., Shinpo,S., Takeuchi,C., Wada,T., Watanabe,A.,
            Yamada,M., Yasuda,M. and Tabata,S.
  CONSRTM   European Union Chromosome 3 Arabidopsis Sequencing Consortium;
            Institute for Genomic Research; Kazusa DNA Research Institute
  TITLE     Sequence and analysis of chromosome 3 of the plant Arabidopsis
            thaliana
  JOURNAL   Nature 408 (6814), 820-822 (2000)
   PUBMED   11130713
REFERENCE   2  (bases 1 to 23459830)
  AUTHORS   Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
  CONSRTM   TAIR
  TITLE     Direct Submission
  JOURNAL   Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
            Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE   3  (bases 1 to 23459830)
  AUTHORS   Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
            Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
            Vaughn,M. and Town,C.D.
  TITLE     Direct Submission
  JOURNAL   Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
            9704 Medical Center Dr, Rockville, MD 20850, USA
  REMARK    Protein update by submitter
FEATURES             Qualifiers
     source          /organism="Arabidopsis thaliana"
                     /mol_type="genomic DNA"
                     /db_xref="taxon:3702"
                     /chromosome="3"
                     /ecotype="Columbia"
     protein         /locus_tag="AT3G07830"
                     /gene_synonym="PGA3"
                     /gene_synonym="polygalacturonase 3"
                     /inference="Similar to RNA sequence,
                     EST:INSD:BP645775.1,INSD:AU238792.1,INSD:ES074867.1,
                     INSD:BX836604.1,INSD:ES028929.1,INSD:AU230031.1"
                     /inference="Similar to RNA sequence,
                     mRNA:INSD:BX822574.1,INSD:BT005245.1,INSD:AK117953.1"
                     /note="Pectin lyase-like superfamily protein; FUNCTIONS
                     IN: polygalacturonase activity; INVOLVED IN: carbohydrate
                     metabolic process; LOCATED IN: plant-type cell wall;
                     EXPRESSED IN: 7 plant structures; EXPRESSED DURING: L
                     mature pollen stage, M germinated pollen stage, 4
                     anthesis, petal differentiation and expansion stage;
                     CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence
                     factor (InterPro:IPR011050), Pectin lyase fold
                     (InterPro:IPR012334), Glycoside hydrolase, family 28
                     (InterPro:IPR000743), Parallel beta-helix repeat
                     (InterPro:IPR006626); BEST Arabidopsis thaliana protein
                     match is: Pectin lyase-like superfamily protein
                     (TAIR:AT3G07820.1); Has 3642 Blast hits to 3624 proteins
                     in 437 species: Archae - 6; Bacteria - 810; Metazoa - 14;
                     Fungi - 1259; Plants - 1446; Viruses - 0; Other Eukaryotes
                     - 107 (source: NCBI BLink)."
                     /db_xref="TAIR:AT3G07830"
                     /db_xref="Araport:AT3G07830"
     intron_pos      39:0 (1/3)
     intron_pos      141:0 (2/3)
     intron_pos      314:0 (3/3)
BEGIN
        1 MGSYFGISTI FVICLLGFSA NAHEVLRLTS SPGSDITQAL LRAFTTACQS PTPRKVVIPK
       61 GQFKLGEIMM SGPCKSPVEI TLLGTVLADG NSIHGKEKWV VFQRMDGFRL NGGGTFDGEG
      121 NAAWRVNNCH KTFECKKLPI SIRFDFVTNA EIRDISSIDA KNFHINVIGA KNMTFDNVKI
      181 MAPAESPNTD GIHLGRSVGV SIINSRISTG DDCVSVGDGM VNLLVKNVVC GPGHGISVGS
      241 LGRYGHEQDV SGIRVINCTL QETDNGLRIK TWPSAACSTT ASNIHFENII LRNVSNPILI
      301 DQEYCPWNQC NKQKSSSIKL ANISFRRIRG TSGNKDAVKL LCSKGYPCEN VQVGDINIQY
      361 TGADGPATFM CSNVRPKLVG TQFPKACNTP PVLTQPK
//