LOCUS AEE74274.1 883 aa PRT PLN 23-MAR-2023 DEFINITION Arabidopsis thaliana RING/U-box protein protein. ACCESSION CP002686-936 PROTEIN_ID AEE74274.1 SOURCE Arabidopsis thaliana (thale cress) ORGANISM Arabidopsis thaliana Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis. REFERENCE 1 (bases 1 to 23459830) AUTHORS Salanoubat,M., Lemcke,K., Rieger,M., Ansorge,W., Unseld,M., Fartmann,B., Valle,G., Blocker,H., Perez-Alonso,M., Obermaier,B., Delseny,M., Boutry,M., Grivell,L.A., Mache,R., Puigdomenech,P., De Simone,V., Choisne,N., Artiguenave,F., Robert,C., Brottier,P., Wincker,P., Cattolico,L., Weissenbach,J., Saurin,W., Quetier,F., Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Benes,V., Wurmbach,E., Drzonek,H., Erfle,H., Jordan,N., Bangert,S., Wiedelmann,R., Kranz,H., Voss,H., Holland,R., Brandt,P., Nyakatura,G., Vezzi,A., D'Angelo,M., Pallavicini,A., Toppo,S., Simionati,B., Conrad,A., Hornischer,K., Kauer,G., Lohnert,T.H., Nordsiek,G., Reichelt,J., Scharfe,M., Schon,O., Bargues,M., Terol,J., Climent,J., Navarro,P., Collado,C., Perez-Perez,A., Ottenwalder,B., Duchemin,D., Cooke,R., Laudie,M., Berger-Llauro,C., Purnelle,B., Masuy,D., de Haan,M., Maarse,A.C., Alcaraz,J.P., Cottet,A., Casacuberta,E., Monfort,A., Argiriou,A., flores,M., Liguori,R., Vitale,D., Mannhaupt,G., Haase,D., Schoof,H., Rudd,S., Zaccaria,P., Mewes,H.W., Mayer,K.F., Kaul,S., Town,C.D., Koo,H.L., Tallon,L.J., Jenkins,J., Rooney,T., Rizzo,M., Walts,A., Utterback,T., Fujii,C.Y., Shea,T.P., Creasy,T.H., Haas,B., Maiti,R., Wu,D., Peterson,J., Van Aken,S., Pai,G., Militscher,J., Sellers,P., Gill,J.E., Feldblyum,T.V., Preuss,D., Lin,X., Nierman,W.C., Salzberg,S.L., White,O., Venter,J.C., Fraser,C.M., Kaneko,T., Nakamura,Y., Sato,S., Kato,T., Asamizu,E., Sasamoto,S., Kimura,T., Idesawa,K., Kawashima,K., Kishida,Y., Kiyokawa,C., Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S., Nakazaki,N., Shinpo,S., Takeuchi,C., Wada,T., Watanabe,A., Yamada,M., Yasuda,M. and Tabata,S. CONSRTM European Union Chromosome 3 Arabidopsis Sequencing Consortium; Institute for Genomic Research; Kazusa DNA Research Institute TITLE Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana JOURNAL Nature 408 (6814), 820-822 (2000) PUBMED 11130713 REFERENCE 2 (bases 1 to 23459830) AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E. CONSRTM TAIR TITLE Direct Submission JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie Institution, 260 Panama Street, Stanford, CA, USA REFERENCE 3 (bases 1 to 23459830) AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M., Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R., Vaughn,M. and Town,C.D. TITLE Direct Submission JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute, 9704 Medical Center Dr, Rockville, MD 20850, USA REMARK Protein update by submitter FEATURES Qualifiers source /organism="Arabidopsis thaliana" /mol_type="genomic DNA" /db_xref="taxon:3702" /chromosome="3" /ecotype="Columbia" protein /locus_tag="AT3G05670" /gene_synonym="F18C1.6" /gene_synonym="F18C1_6" /inference="Similar to RNA sequence, EST:INSD:AV792363.1,INSD:AV795103.1,INSD:EL243226.1, INSD:EH829053.1,INSD:EG488638.1,INSD:EL286087.1, INSD:ES069016.1,INSD:AI992827.1,INSD:BP605733.1, INSD:ES125116.1,INSD:EG488639.1,INSD:T20674.1, INSD:BX837178.1,INSD:EL086380.1,INSD:AV548049.1, INSD:EH815902.1,INSD:ES048386.1,INSD:ES154319.1, INSD:ES049463.1,INSD:ES048904.1,INSD:AI100470.1, INSD:ES030364.1,INSD:R90668.1,INSD:EL268008.1, INSD:BP617290.1,INSD:ES030349.1,INSD:BP781732.1, INSD:EH826307.1,INSD:BP810481.1,INSD:AV543667.1, INSD:EL000296.1,INSD:ES213022.1,INSD:ES077741.1, INSD:EL298555.1,INSD:ES011358.1,INSD:AV825775.1, INSD:EL985183.1" /inference="Similar to RNA sequence, mRNA:INSD:AY120751.1,INSD:BT002568.1" /note="RING/U-box protein; FUNCTIONS IN: DNA binding, zinc ion binding; INVOLVED IN: regulation of transcription, DNA-dependent; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type, conserved site (InterPro:IPR017907), Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, PHD-type (InterPro:IPR001965), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: zinc finger (C3HC4-type RING finger) family protein / BRCT domain-containing protein (TAIR:AT1G67180.1); Has 32410 Blast hits to 21304 proteins in 1066 species: Archae - 126; Bacteria - 4266; Metazoa - 11275; Fungi - 4969; Plants - 2419; Viruses - 550; Other Eukaryotes - 8805 (source: NCBI BLink)." /db_xref="TAIR:AT3G05670" /db_xref="Araport:AT3G05670" intron_pos 486:0 (1/2) intron_pos 793:1 (2/2) BEGIN 1 MGKRNTSWAR NSNRKVRSKD KGSDESDEDY VISDEDEEES EADLKEEYAS SVDGEPSFDG 61 FNGSDAVEDE ELDEVEEEDV MLRNVEWPKV KTGPRGNRKI TGCKSRKTNQ VVVSDNEDVD 121 LDDADDEDDE IRNSRNAVGK SGSLDGEKHQ RIGLGKRRRV FYEIEDEDGD YPEEDGDEEE 181 ERDVENVDSN SLHDGEDGKM ALEEQDNVSH ETEKEDDGDY EDEDEDDDGD EDFTADEDVS 241 LDEEEEEEII ACNKNALKVC KGNKRKRRSG EGRKRRKKCS VAKTRLTRGR KRRVRNTKKG 301 VDEDDDDFVD DCLPARKKAK TKSSRPRPRR RCTVPSDSDV ASSGESDYEY TISEEEREQI 361 REAGSLLKSS VNHASSIRQT TVNKDLPQLR KSPVKKGEKK VELVKRDVIK NVCGICLSEE 421 DMRRLKGTLD CCSHYFCFTC IMEWSKVESR CPLCKQRFRT ISKPARSTPG VDLREVVIPV 481 PERDQVYQPT EEELRSYLDP YENIICTECH QGDDDGLMLL CDLCDSSAHT YCVGLGREVP 541 EGNWYCEGCR PVALGSASSQ THIISEQQRG SGFYSRPSPL VVSGQYQDVS LIVSPRTPFF 601 NGENLFSPRI PNGDAQGSSP SGLGATTLSR RRTLHRHIQN IINGDRLINM GARTGGTSSD 661 GFVTTQIGHG RTIDPSQPVA SQETGISLYA ISEERLPNNN SLISAHDPEL LSPKLDEFGS 721 EEAFRRLSNN TFLGERPIDL GFHHGLAQGD PLVSNQQRLH SHMPNTMSSM AGERLQERVK 781 AHLKNLSSQN DLGQTTFDEI STCSIHTILA ACGLEHESSE VHLVPPPVTC THHHMTPGSS 841 SSSSSGSSLM KGCCYSCFDS FVEDVVKMIL DTRQPHWLSL GLH //