LOCUS AEE74183.1 753 aa PRT PLN 23-MAR-2023 DEFINITION Arabidopsis thaliana Transducin/WD40 repeat-like superfamily protein protein. ACCESSION CP002686-816 PROTEIN_ID AEE74183.1 SOURCE Arabidopsis thaliana (thale cress) ORGANISM Arabidopsis thaliana Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis. REFERENCE 1 (bases 1 to 23459830) AUTHORS Salanoubat,M., Lemcke,K., Rieger,M., Ansorge,W., Unseld,M., Fartmann,B., Valle,G., Blocker,H., Perez-Alonso,M., Obermaier,B., Delseny,M., Boutry,M., Grivell,L.A., Mache,R., Puigdomenech,P., De Simone,V., Choisne,N., Artiguenave,F., Robert,C., Brottier,P., Wincker,P., Cattolico,L., Weissenbach,J., Saurin,W., Quetier,F., Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Benes,V., Wurmbach,E., Drzonek,H., Erfle,H., Jordan,N., Bangert,S., Wiedelmann,R., Kranz,H., Voss,H., Holland,R., Brandt,P., Nyakatura,G., Vezzi,A., D'Angelo,M., Pallavicini,A., Toppo,S., Simionati,B., Conrad,A., Hornischer,K., Kauer,G., Lohnert,T.H., Nordsiek,G., Reichelt,J., Scharfe,M., Schon,O., Bargues,M., Terol,J., Climent,J., Navarro,P., Collado,C., Perez-Perez,A., Ottenwalder,B., Duchemin,D., Cooke,R., Laudie,M., Berger-Llauro,C., Purnelle,B., Masuy,D., de Haan,M., Maarse,A.C., Alcaraz,J.P., Cottet,A., Casacuberta,E., Monfort,A., Argiriou,A., flores,M., Liguori,R., Vitale,D., Mannhaupt,G., Haase,D., Schoof,H., Rudd,S., Zaccaria,P., Mewes,H.W., Mayer,K.F., Kaul,S., Town,C.D., Koo,H.L., Tallon,L.J., Jenkins,J., Rooney,T., Rizzo,M., Walts,A., Utterback,T., Fujii,C.Y., Shea,T.P., Creasy,T.H., Haas,B., Maiti,R., Wu,D., Peterson,J., Van Aken,S., Pai,G., Militscher,J., Sellers,P., Gill,J.E., Feldblyum,T.V., Preuss,D., Lin,X., Nierman,W.C., Salzberg,S.L., White,O., Venter,J.C., Fraser,C.M., Kaneko,T., Nakamura,Y., Sato,S., Kato,T., Asamizu,E., Sasamoto,S., Kimura,T., Idesawa,K., Kawashima,K., Kishida,Y., Kiyokawa,C., Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S., Nakazaki,N., Shinpo,S., Takeuchi,C., Wada,T., Watanabe,A., Yamada,M., Yasuda,M. and Tabata,S. CONSRTM European Union Chromosome 3 Arabidopsis Sequencing Consortium; Institute for Genomic Research; Kazusa DNA Research Institute TITLE Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana JOURNAL Nature 408 (6814), 820-822 (2000) PUBMED 11130713 REFERENCE 2 (bases 1 to 23459830) AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E. CONSRTM TAIR TITLE Direct Submission JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie Institution, 260 Panama Street, Stanford, CA, USA REFERENCE 3 (bases 1 to 23459830) AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M., Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R., Vaughn,M. and Town,C.D. TITLE Direct Submission JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute, 9704 Medical Center Dr, Rockville, MD 20850, USA REMARK Protein update by submitter FEATURES Qualifiers source /organism="Arabidopsis thaliana" /mol_type="genomic DNA" /db_xref="taxon:3702" /chromosome="3" /ecotype="Columbia" protein /gene="LRS1" /locus_tag="AT3G05090" /gene_synonym="LATERAL ROOT STIMULATOR 1" /gene_synonym="T12H1.5" /gene_synonym="T12H1_5" /inference="Similar to RNA sequence, EST:INSD:EH795511.1,INSD:EL150377.1,INSD:EH859728.1, INSD:BP599540.1,INSD:EG449899.1,INSD:ES021191.1, INSD:ES154756.1,INSD:DR359442.1,INSD:AV439944.1, INSD:EG449895.1,INSD:ES014116.1,INSD:BX840391.1, INSD:EL132961.1,INSD:EH917231.1,INSD:AV825548.1, INSD:BP614147.1,INSD:EL147862.1,INSD:EG491679.1, INSD:ES121497.1,INSD:EL998207.1,INSD:EG526619.1, INSD:BP562131.2,INSD:ES176520.1,INSD:EH802332.1, INSD:EG491703.1,INSD:EH875604.1,INSD:EH814609.1, INSD:EH881364.1,INSD:EL159104.1,INSD:EG491704.1, INSD:EH956951.1,INSD:AV830668.1,INSD:ES053544.1, INSD:EL078374.1,INSD:EG449896.1,INSD:EL229046.1, INSD:EL997631.1,INSD:CB185764.2,INSD:EG449898.1, INSD:ES048270.1,INSD:EH873487.1,INSD:ES059840.1, INSD:EL084192.1,INSD:AV441895.1,INSD:ES066778.1" /inference="Similar to RNA sequence, mRNA:INSD:AY142674.1,INSD:AY056292.1,INSD:BT000631.1" /note="LATERAL ROOT STIMULATOR 1 (LRS1); FUNCTIONS IN: nucleotide binding; INVOLVED IN: lateral root formation; LOCATED IN: CUL4 RING ubiquitin ligase complex; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), Protein of unknown function DUF3337 (InterPro:IPR021772), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Coatomer, alpha subunit (TAIR:AT1G62020.1); Has 59803 Blast hits to 26869 proteins in 729 species: Archae - 50; Bacteria - 7042; Metazoa - 23770; Fungi - 14096; Plants - 7202; Viruses - 3; Other Eukaryotes - 7640 (source: NCBI BLink)." /db_xref="TAIR:AT3G05090" /db_xref="Araport:AT3G05090" intron_pos 34:0 (1/16) intron_pos 87:0 (2/16) intron_pos 109:0 (3/16) intron_pos 139:0 (4/16) intron_pos 236:0 (5/16) intron_pos 268:2 (6/16) intron_pos 280:2 (7/16) intron_pos 321:0 (8/16) intron_pos 400:0 (9/16) intron_pos 432:0 (10/16) intron_pos 454:0 (11/16) intron_pos 467:0 (12/16) intron_pos 512:0 (13/16) intron_pos 629:2 (14/16) intron_pos 661:0 (15/16) intron_pos 722:0 (16/16) BEGIN 1 MHRVGSAGSN GGSVRTRKEK KLTYVLNDAN DTKHCAGINC LDVLKSSVSN DQSYLFTGSR 61 DGTLKRWAFD EDATFCSATF ESHVDWVNDA ALAGESTLVS CSSDTTVKTW DGLSDGVCTR 121 TLRQHSDYVT CLAVAAKNNN VVASGGLGGE VFIWDIEAAL SPVTKPNDAN EDSSSNGANG 181 PVTSLRTVGS SNNISVQSSP SHGYTPTIAK GHKESVYALA MNDTGTMLVS GGTEKVLRVW 241 DPRTGSKSMK LRGHTDNVRV LLLDSTGRFC LSGSSDSMIR LWDLGQQRCL HTYAVHTDSV 301 WALACNPSFS HVYSGGRDQC LYLTDLATRE SVLLCTKEHP IQQLALQDNS IWVATTDSSV 361 ERWPAEVQSP KTVFQRGGSF LAGNLSFNRA RVSLEGLNPA PAYKEPSITV PGTHPIVQHE 421 ILNNKRQILT KDAAGSVKLW DITRGVVVED YGKISFEEKK EELFEMVSIP SWFTVDTRLG 481 CLSVHLETPQ CFSAEMYSAD LKVSGRPEDD KINLARETLK GLLGHWLAKK KHKPKPQVLA 541 SGDTLSVKDT KKNLSASKTE ESSAASDPVY PPFEFSSVSP PSIITEGSQG GPWRKKITEF 601 TGTEDEKDFP LWCLDAVLNN RLPPRENTKL SFFLHPCEGS SVQVVTLGKL SAPRILRVHK 661 VTNYVVEKMV LDNPLDSLAI DAASVSGGQP QPLFSGNGLL QSGLKPWQKL RPSIEILCNS 721 QVLSPDMSLA TVRAYVWKKP EDLILNYRVA IAR //