LOCUS AEE74012.1 202 aa PRT PLN 23-MAR-2023 DEFINITION Arabidopsis thaliana H/ACA ribonucleoprotein complex, subunit Gar1/Naf1 protein protein. ACCESSION CP002686-586 PROTEIN_ID AEE74012.1 SOURCE Arabidopsis thaliana (thale cress) ORGANISM Arabidopsis thaliana Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis. REFERENCE 1 (bases 1 to 23459830) AUTHORS Salanoubat,M., Lemcke,K., Rieger,M., Ansorge,W., Unseld,M., Fartmann,B., Valle,G., Blocker,H., Perez-Alonso,M., Obermaier,B., Delseny,M., Boutry,M., Grivell,L.A., Mache,R., Puigdomenech,P., De Simone,V., Choisne,N., Artiguenave,F., Robert,C., Brottier,P., Wincker,P., Cattolico,L., Weissenbach,J., Saurin,W., Quetier,F., Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Benes,V., Wurmbach,E., Drzonek,H., Erfle,H., Jordan,N., Bangert,S., Wiedelmann,R., Kranz,H., Voss,H., Holland,R., Brandt,P., Nyakatura,G., Vezzi,A., D'Angelo,M., Pallavicini,A., Toppo,S., Simionati,B., Conrad,A., Hornischer,K., Kauer,G., Lohnert,T.H., Nordsiek,G., Reichelt,J., Scharfe,M., Schon,O., Bargues,M., Terol,J., Climent,J., Navarro,P., Collado,C., Perez-Perez,A., Ottenwalder,B., Duchemin,D., Cooke,R., Laudie,M., Berger-Llauro,C., Purnelle,B., Masuy,D., de Haan,M., Maarse,A.C., Alcaraz,J.P., Cottet,A., Casacuberta,E., Monfort,A., Argiriou,A., flores,M., Liguori,R., Vitale,D., Mannhaupt,G., Haase,D., Schoof,H., Rudd,S., Zaccaria,P., Mewes,H.W., Mayer,K.F., Kaul,S., Town,C.D., Koo,H.L., Tallon,L.J., Jenkins,J., Rooney,T., Rizzo,M., Walts,A., Utterback,T., Fujii,C.Y., Shea,T.P., Creasy,T.H., Haas,B., Maiti,R., Wu,D., Peterson,J., Van Aken,S., Pai,G., Militscher,J., Sellers,P., Gill,J.E., Feldblyum,T.V., Preuss,D., Lin,X., Nierman,W.C., Salzberg,S.L., White,O., Venter,J.C., Fraser,C.M., Kaneko,T., Nakamura,Y., Sato,S., Kato,T., Asamizu,E., Sasamoto,S., Kimura,T., Idesawa,K., Kawashima,K., Kishida,Y., Kiyokawa,C., Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S., Nakazaki,N., Shinpo,S., Takeuchi,C., Wada,T., Watanabe,A., Yamada,M., Yasuda,M. and Tabata,S. CONSRTM European Union Chromosome 3 Arabidopsis Sequencing Consortium; Institute for Genomic Research; Kazusa DNA Research Institute TITLE Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana JOURNAL Nature 408 (6814), 820-822 (2000) PUBMED 11130713 REFERENCE 2 (bases 1 to 23459830) AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E. CONSRTM TAIR TITLE Direct Submission JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie Institution, 260 Panama Street, Stanford, CA, USA REFERENCE 3 (bases 1 to 23459830) AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M., Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R., Vaughn,M. and Town,C.D. TITLE Direct Submission JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute, 9704 Medical Center Dr, Rockville, MD 20850, USA REMARK Protein update by submitter FEATURES Qualifiers source /organism="Arabidopsis thaliana" /mol_type="genomic DNA" /db_xref="taxon:3702" /chromosome="3" /ecotype="Columbia" protein /locus_tag="AT3G03920" /gene_synonym="F20H23.3" /gene_synonym="F20H23_3" /inference="Similar to RNA sequence, EST:INSD:BP569397.1,INSD:BP796158.1,INSD:BP563514.1, INSD:CK120227.1,INSD:ES022030.1,INSD:EH955574.1, INSD:ES006972.1,INSD:DR218174.1,INSD:DR218169.1, INSD:ES065204.1,INSD:EL318397.1,INSD:ES065587.1, INSD:CK120477.1,INSD:BP643729.1,INSD:T21476.1, INSD:BP652996.1,INSD:AV788943.1,INSD:BP837645.1, INSD:EH839897.1,INSD:BP565437.1,INSD:BP581484.1, INSD:BP653303.1,INSD:BP798781.1,INSD:EG518471.1, INSD:ES059880.1,INSD:DR218172.1,INSD:EG518478.1, INSD:DR218181.1,INSD:BP844662.1,INSD:EH896274.1, INSD:BP570115.1,INSD:DR218176.1,INSD:ES018593.1, INSD:DR218171.1,INSD:EL212366.1,INSD:EG518484.1, INSD:BP596074.1,INSD:DR218180.1,INSD:ES168275.1, INSD:DR371726.1,INSD:DR218183.1,INSD:BP830357.1, INSD:ES137950.1,INSD:BP635275.1,INSD:DR218177.1, INSD:AV824955.1,INSD:BP589328.1,INSD:BP588464.1, INSD:DR218173.1,INSD:BP621892.1,INSD:EG518483.1, INSD:AI992983.1,INSD:ES076840.1,INSD:BP779693.1, INSD:BP819088.1,INSD:ES052374.1,INSD:BP833853.1, INSD:EH814566.1,INSD:BP648449.1,INSD:DR218170.1, INSD:DR218184.1,INSD:DR218178.1,INSD:DR218182.1, INSD:DR218179.1,INSD:BP852230.1,INSD:BP859564.1, INSD:DR218165.1,INSD:DR218175.1,INSD:DR218168.1, INSD:EG466263.1,INSD:EH841700.1,INSD:DR218185.1, INSD:DR218166.1,INSD:BP643858.1,INSD:ES166975.1" /inference="Similar to RNA sequence, mRNA:INSD:AY063874.1,INSD:BX825245.1,INSD:AY091234.1, INSD:AY084502.1" /note="H/ACA ribonucleoprotein complex, subunit Gar1/Naf1 protein; FUNCTIONS IN: snoRNA binding, pseudouridine synthase activity, RNA binding; LOCATED IN: chloroplast thylakoid membrane, nucleolus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: H/ACA ribonucleoprotein complex, subunit Gar1, eukaryote (InterPro:IPR021154), H/ACA ribonucleoprotein complex, subunit Gar1/Naf1 (InterPro:IPR007504); BEST Arabidopsis thaliana protein match is: H/ACA ribonucleoprotein complex, subunit Gar1/Naf1 protein (TAIR:AT5G18180.1); Has 27180 Blast hits to 8695 proteins in 812 species: Archae - 17; Bacteria - 4971; Metazoa - 11125; Fungi - 2086; Plants - 5744; Viruses - 428; Other Eukaryotes - 2809 (source: NCBI BLink)." /db_xref="TAIR:AT3G03920" /db_xref="Araport:AT3G03920" intron_pos 60:1 (1/3) intron_pos 110:0 (2/3) intron_pos 148:2 (3/3) BEGIN 1 MRPPMRGGGG FRGRGGRDGG GGGRFGGGGG RFGGGGGRFG GGGGRFGGFR DEGPPSEVVE 61 VATFVHACEG DAVTKLSQEK IPHFNAPIYL ENKTQIGKVD EIFGPINESL FSIKMMEGIV 121 ATSYSPGDKF FIDPYKLLPL ARFLPQPKGQ STGGRGGAGR GRGDSRGRGR GGSFSRGRGA 181 PRGGRFPPRG GSRGSFRGRG RF //