LOCUS AEC10820.1 729 aa PRT PLN 23-MAR-2023 DEFINITION Arabidopsis thaliana RNA helicase family protein protein. ACCESSION CP002685-7430 PROTEIN_ID AEC10820.1 SOURCE Arabidopsis thaliana (thale cress) ORGANISM Arabidopsis thaliana Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis. REFERENCE 1 (bases 1 to 19698289) AUTHORS Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D., Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V., Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L., Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L., Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H., Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D., Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and Venter,J.C. TITLE Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana JOURNAL Nature 402 (6763), 761-768 (1999) PUBMED 10617197 REFERENCE 2 (bases 1 to 19698289) AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E. CONSRTM TAIR TITLE Direct Submission JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie Institution, 260 Panama Street, Stanford, CA, USA REFERENCE 3 (bases 1 to 19698289) AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M., Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R., Vaughn,M. and Town,C.D. TITLE Direct Submission JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute, 9704 Medical Center Dr, Rockville, MD 20850, USA REMARK Protein update by submitter FEATURES Qualifiers source /organism="Arabidopsis thaliana" /mol_type="genomic DNA" /db_xref="taxon:3702" /chromosome="2" /ecotype="Columbia" protein /locus_tag="AT2G47250" /gene_synonym="T8I13.9" /inference="Similar to RNA sequence, EST:INSD:DR253633.1,INSD:ES186143.1,INSD:EL265169.1, INSD:EL254019.1,INSD:DR253619.1,INSD:EL156887.1, INSD:DR253598.1,INSD:DR253610.1,INSD:BP806511.1, INSD:ES189738.1,INSD:DR253620.1,INSD:DR280890.1, INSD:EH973443.1,INSD:BE525476.1,INSD:DR253603.1, INSD:ES138771.1,INSD:EL138497.1,INSD:DR253592.1, INSD:DR253601.1,INSD:DR253604.1,INSD:BP838656.1, INSD:AV548639.1,INSD:DR253593.1,INSD:AV826952.1, INSD:BP610735.1,INSD:AV546794.1,INSD:DR253611.1, INSD:DR253616.1,INSD:ES090788.1,INSD:EL318276.1, INSD:DR253617.1,INSD:BP867074.1,INSD:DR253621.1, INSD:DR253594.1,INSD:DR253626.1,INSD:BP671615.1, INSD:BP819463.1,INSD:DR253584.1,INSD:AV442394.1, INSD:BP847181.1,INSD:DR280892.1,INSD:EL230764.1, INSD:DR253596.1,INSD:DR253605.1,INSD:BP811467.1, INSD:DR253625.1,INSD:DR253590.1,INSD:EL312944.1, INSD:DR253591.1,INSD:AV796854.1,INSD:DR253615.1, INSD:DR253630.1,INSD:DR253628.1,INSD:DR253614.1, INSD:ES165585.1,INSD:BP807952.1,INSD:DR253595.1, INSD:DR253600.1,INSD:DR253627.1,INSD:DR253631.1, INSD:BP655986.1,INSD:DR253597.1,INSD:BE528658.1, INSD:DR253634.1,INSD:DR280889.1,INSD:DR253632.1, INSD:EL164635.1,INSD:DR253618.1,INSD:DR253602.1, INSD:DR253624.1,INSD:DR253583.1,INSD:DR253586.1, INSD:BP829588.1,INSD:AV811700.1,INSD:DR253613.1, INSD:DR253585.1,INSD:DR253587.1,INSD:BP637327.1, INSD:BP646152.1,INSD:DR253599.1,INSD:BP612808.1, INSD:DR253608.1,INSD:DR253629.1,INSD:BP598178.1, INSD:DR253609.1,INSD:DR253622.1,INSD:DR253606.1, INSD:DR253588.1,INSD:DR253589.1,INSD:ES193596.1, INSD:BP603247.1,INSD:DR253623.1,INSD:EL027141.1, INSD:AI997433.1,INSD:DR253607.1,INSD:BP844389.1, INSD:EH843878.1" /inference="similar to RNA sequence, mRNA:INSD:BX820131.1,INSD:BT004534.1,INSD:AK226886.1, INSD:AY128301.1" /note="RNA helicase family protein; FUNCTIONS IN: in 7 functions; LOCATED IN: membrane, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Helicase-associated domain (InterPro:IPR007502), ATPase, AAA+ type, core (InterPro:IPR003593), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), Domain of unknown function DUF1605 (InterPro:IPR011709), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: RNA helicase family protein (TAIR:AT3G62310.1); Has 10530 Blast hits to 9574 proteins in 1628 species: Archae - 0; Bacteria - 3453; Metazoa - 2465; Fungi - 1286; Plants - 884; Viruses - 707; Other Eukaryotes - 1735 (source: NCBI BLink)." /db_xref="Araport:AT2G47250" /db_xref="TAIR:AT2G47250" intron_pos 98:0 (1/6) intron_pos 165:2 (2/6) intron_pos 527:1 (3/6) intron_pos 569:1 (4/6) intron_pos 649:0 (5/6) intron_pos 688:2 (6/6) BEGIN 1 MGTERKRKVS LFDVMEDPSL SSKNTKSNGL GLAAAAGGGS NLINKWNGKA YSQRYFEILE 61 KRRDLPVWLQ KDDFLNTLNS NQTLILVGET GSGKTTQIPQ FVLDAVVADN SDKGRKWLVG 121 CTQPRRVAAM SVSRRVADEM DVSIGEEVGY SIRFEDCTSS RTMLKYLTDG MLLREAMADP 181 LLERYKVIIL DEAHERTLAT DVLFGLLKEV LRNRPDLKLV VMSATLEAEK FQEYFSGAPL 241 MKVPGRLHPV EIFYTQEPER DYLEAAIRTV VQIHMCEPPG DILVFLTGEE EIEDACRKIN 301 KEVSNLGDQV GPVKVVPLYS TLPPAMQQKI FDPAPVPLTE GGPAGRKIVV STNIAETSLT 361 IDGIVYVIDP GFAKQKVYNP RIRVESLLVS PISKASAHQR SGRAGRTRPG KCFRLYTEKS 421 FNNDLQPQTY PEILRSNLAN TVLTLKKLGI DDLVHFDFMD PPAPETLMRA LEVLNYLGAL 481 DDEGNLTKTG EIMSEFPLDP QMSKMLIVSP EFNCSNEILS VSAMLSVPNC FVRPREAQKA 541 ADEAKARFGH IDGDHLTLLN VYHAYKQNNE DPNWCFENFV NNRAMKSADN VRQQLVRIMS 601 RFNLKMCSTD FNSRDYYVNI RKAMLAGYFM QVAHLERTGH YLTVKDNQVV HLHPSNCLDH 661 KPEWVIYNEY VLTTRNFIRT VTDIRGEWLV DVAQHYYDLS NFPNCEAKRA LEKLYKKRER 721 EKNESKNRK //