LOCUS AEC10670.1 328 aa PRT PLN 23-MAR-2023 DEFINITION Arabidopsis thaliana TGF-beta receptor interacting protein 1 protein. ACCESSION CP002685-7211 PROTEIN_ID AEC10670.1 SOURCE Arabidopsis thaliana (thale cress) ORGANISM Arabidopsis thaliana Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis. REFERENCE 1 (bases 1 to 19698289) AUTHORS Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D., Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V., Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L., Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L., Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H., Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D., Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and Venter,J.C. TITLE Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana JOURNAL Nature 402 (6763), 761-768 (1999) PUBMED 10617197 REFERENCE 2 (bases 1 to 19698289) AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E. CONSRTM TAIR TITLE Direct Submission JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie Institution, 260 Panama Street, Stanford, CA, USA REFERENCE 3 (bases 1 to 19698289) AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M., Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R., Vaughn,M. and Town,C.D. TITLE Direct Submission JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute, 9704 Medical Center Dr, Rockville, MD 20850, USA REMARK Protein update by submitter FEATURES Qualifiers source /organism="Arabidopsis thaliana" /mol_type="genomic DNA" /db_xref="taxon:3702" /chromosome="2" /ecotype="Columbia" protein /gene="TRIP-1" /locus_tag="AT2G46280" /gene_synonym="T3F17.7" /gene_synonym="TGF-beta receptor interacting protein 1" /gene_synonym="TIF3I1" /gene_synonym="TRIP1" /inference="Similar to RNA sequence, EST:INSD:BP608406.1,INSD:ES097048.1,INSD:EG507970.1, INSD:BP787122.1,INSD:T43639.1,INSD:ES072620.1, INSD:DR376319.1,INSD:ES000930.1,INSD:ES103926.1, INSD:ES198660.1,INSD:BP816025.1,INSD:BP665751.1, INSD:EL967575.1,INSD:EL288818.1,INSD:ES213454.1, INSD:EH917949.1,INSD:ES104997.1,INSD:EG507968.1, INSD:BP836400.1,INSD:EL147527.1,INSD:AV519843.1, INSD:EG525460.1,INSD:ES196091.1,INSD:EL200933.1, INSD:BE528297.1,INSD:DR341733.1,INSD:DR338947.1, INSD:BP626814.1,INSD:Z29843.1,INSD:ES212676.1, INSD:Z27253.1,INSD:ES085402.1,INSD:ES024276.1, INSD:EH862346.1,INSD:BX839213.1,INSD:EG507980.1, INSD:ES114267.1,INSD:ES213132.1,INSD:BU635558.1, INSD:T75627.1,INSD:BP575591.1,INSD:BP789002.1, INSD:EH970443.1,INSD:BP793330.1,INSD:DR341727.1, INSD:DR341730.1,INSD:N38091.1,INSD:DR338940.1, INSD:EL991558.1,INSD:BP584207.1,INSD:ES124998.1, INSD:EL292588.1,INSD:BP786831.1,INSD:ES092075.1, INSD:BP635577.1,INSD:BP563630.1,INSD:AV788546.1, INSD:BP578632.1,INSD:EL968794.1,INSD:BP578641.1, INSD:ES068248.1,INSD:ES125442.1,INSD:ES058310.1, INSD:AI998398.1,INSD:ES166556.1,INSD:ES009477.1, INSD:CB258224.1,INSD:ES199902.1,INSD:ES197297.1, INSD:AV517937.1,INSD:AV541154.1,INSD:ES046587.1, INSD:BP576149.1,INSD:BP577453.1,INSD:EH818492.1, INSD:BP824022.1,INSD:T13850.1,INSD:DR375321.1, INSD:DR338951.1,INSD:AV535977.1,INSD:EH899824.1, INSD:ES104922.1,INSD:T46040.1,INSD:H36544.1, INSD:DR341729.1,INSD:ES072383.1,INSD:EL063884.1, INSD:EH954487.1,INSD:ES179895.1,INSD:BP783282.1, INSD:BP821034.1,INSD:ES127751.1,INSD:ES087895.1, INSD:BP840984.1,INSD:ES002318.1,INSD:AV440748.1, INSD:ES077078.1,INSD:EH833723.1,INSD:BP571398.1, INSD:EL991813.1,INSD:BP625974.1,INSD:EL998518.1, INSD:EG507981.1,INSD:DR338934.1,INSD:EH851066.1, INSD:BP581863.1,INSD:DR341735.1,INSD:EL251806.1, INSD:BP626337.1,INSD:BP582949.1,INSD:AV818882.1, INSD:BP633315.1,INSD:ES203396.1,INSD:EL142644.1, INSD:ES008089.1,INSD:BP779814.1,INSD:EL994666.1, INSD:DR341734.1,INSD:ES145281.1,INSD:DR341732.1, INSD:BP643099.1,INSD:ES090367.1,INSD:AV531345.1, INSD:ES055958.1,INSD:EL269432.1,INSD:ES027604.1, INSD:ES161074.1,INSD:AV532846.1,INSD:ES148773.1, INSD:EH923267.1,INSD:EL053500.1,INSD:BP606068.1, INSD:ES079122.1,INSD:ES003433.1,INSD:AV555771.1, INSD:DR341731.1,INSD:EL181082.1,INSD:ES083019.1, INSD:BP566056.1,INSD:EH823509.1,INSD:BP662552.1, INSD:EL977379.1,INSD:DR381529.1,INSD:EL112691.1, INSD:EH962264.1,INSD:DR341736.1,INSD:AV825831.2, INSD:EG507969.1,INSD:AV530377.1,INSD:EG507971.1" /inference="similar to RNA sequence, mRNA:INSD:BX822030.1,INSD:BX820707.1,INSD:AK226590.1, INSD:BX820483.1,INSD:BX820839.1,INSD:AY064633.1, INSD:BX820114.1,INSD:BX819639.1,INSD:BX820257.1, INSD:U36765.1,INSD:BX820633.1,INSD:BX819310.1, INSD:BX842024.1" /note="TGF-beta receptor interacting protein 1 (TRIP-1); FUNCTIONS IN: protein binding, nucleotide binding; INVOLVED IN: response to cadmium ion, response to salt stress; LOCATED IN: CUL4 RING ubiquitin ligase complex; EXPRESSED IN: male gametophyte, guard cell, root, cultured cell, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT2G46290.1); Has 49007 Blast hits to 22277 proteins in 692 species: Archae - 72; Bacteria - 7331; Metazoa - 19078; Fungi - 11080; Plants - 5389; Viruses - 0; Other Eukaryotes - 6057 (source: NCBI BLink)." /db_xref="Araport:AT2G46280" /db_xref="TAIR:AT2G46280" intron_pos 62:1 (1/7) intron_pos 134:1 (2/7) intron_pos 179:0 (3/7) intron_pos 219:0 (4/7) intron_pos 249:0 (5/7) intron_pos 278:0 (6/7) intron_pos 304:2 (7/7) BEGIN 1 MRPILMKGHE RPLTFLRYNR EGDLLFSCAK DHTPTLWFAD NGERLGTYRG HNGAVWCCDV 61 SRDSSRLITG SADQTAKLWD VKSGKELFTF KFNAPTRSVD FAVGDRLAVI TTDHFVDRTA 121 AIHVKRIAED PEEQDAESVL VLHCPDGKKR INRAVWGPLN QTIVSGGEDK VIRIWDAETG 181 KLLKQSDEEV GHKKDITSLC KAADDSHFLT GSLDKTAKLW DMRTLTLLKT YTTVVPVNAV 241 SLSPLLNHVV LGGGQDASAV TTTDHRAGKF EAKFYDKILQ EEIGGVKGHF GPINALAFNP 301 DGKSFSSGGE DGYVRLHHFD SDYFNIKI //