LOCUS       AEC10399.1               355 aa    PRT              PLN 23-MAR-2023
DEFINITION  Arabidopsis thaliana repressor of lrx1 protein.
ACCESSION   CP002685-6846
PROTEIN_ID  AEC10399.1
SOURCE      Arabidopsis thaliana (thale cress)
  ORGANISM  Arabidopsis thaliana
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
            Camelineae; Arabidopsis.
REFERENCE   1  (bases 1 to 19698289)
  AUTHORS   Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
            Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
            Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
            Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
            Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
            Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
            Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
            Venter,J.C.
  TITLE     Sequence and analysis of chromosome 2 of the plant Arabidopsis
            thaliana
  JOURNAL   Nature 402 (6763), 761-768 (1999)
   PUBMED   10617197
REFERENCE   2  (bases 1 to 19698289)
  AUTHORS   Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
  CONSRTM   TAIR
  TITLE     Direct Submission
  JOURNAL   Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
            Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE   3  (bases 1 to 19698289)
  AUTHORS   Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
            Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
            Vaughn,M. and Town,C.D.
  TITLE     Direct Submission
  JOURNAL   Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
            9704 Medical Center Dr, Rockville, MD 20850, USA
  REMARK    Protein update by submitter
FEATURES             Qualifiers
     source          /organism="Arabidopsis thaliana"
                     /mol_type="genomic DNA"
                     /db_xref="taxon:3702"
                     /chromosome="2"
                     /ecotype="Columbia"
     protein         /gene="ROL5"
                     /locus_tag="AT2G44270"
                     /gene_synonym="F4I1.8"
                     /gene_synonym="repressor of lrx1"
                     /inference="Similar to RNA sequence,
                     EST:INSD:EL988662.1,INSD:DR352436.1,INSD:DR352439.1,
                     INSD:BP668172.1,INSD:DR352438.1,INSD:DR352440.1,
                     INSD:BX839343.1,INSD:DR352437.1,INSD:EH935040.1,
                     INSD:DR202315.1,INSD:ES116432.1,INSD:BX835566.1,
                     INSD:AU229210.1"
                     /note="repressor of lrx1 (ROL5); FUNCTIONS IN: ATP
                     binding; INVOLVED IN: response to reactive oxygen species,
                     regulation of plant-type cell wall organization or
                     biogenesis; EXPRESSED IN: 22 plant structures; EXPRESSED
                     DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s:
                     Rossmann-like alpha/beta/alpha sandwich fold
                     (InterPro:IPR014729), Uncharacterised protein family
                     UPF0021, C-terminal (InterPro:IPR000541), PP-loop
                     (InterPro:IPR011063), 2-thiocytidine tRNA biosynthesis
                     protein, TtcA (InterPro:IPR012089); BEST Arabidopsis
                     thaliana protein match is: 2-thiocytidine tRNA
                     biosynthesis protein, TtcA (TAIR:AT1G76170.1); Has 5057
                     Blast hits to 4981 proteins in 1812 species: Archae - 336;
                     Bacteria - 3752; Metazoa - 169; Fungi - 215; Plants - 64;
                     Viruses - 0; Other Eukaryotes - 521 (source: NCBI BLink)."
                     /db_xref="Araport:AT2G44270"
                     /db_xref="TAIR:AT2G44270"
     intron_pos      33:0 (1/9)
     intron_pos      71:1 (2/9)
     intron_pos      119:0 (3/9)
     intron_pos      159:0 (4/9)
     intron_pos      196:2 (5/9)
     intron_pos      227:2 (6/9)
     intron_pos      241:1 (7/9)
     intron_pos      263:2 (8/9)
     intron_pos      301:0 (9/9)
BEGIN
        1 MEAKNKKAVA SRLCCLCNLR RPVLKRPKTL QQICRECFYE VFEEEIHQVI VQNRLFKSGE
       61 RVAIGASGGK DSTVLAYVLS ELNRRHNYGL DLFLLSIDEG ITGYRDDSLE TVKRNEVQYG
      121 LPLKIVSYKD LYGWTMDEIV KMIGLKNNCT FCGVFRRQAL DRGAALLKVE KLVTGHNADD
      181 IAETVLLNIL RGDIARLSRC TSITTGEDGP IPRCKPFKYT YEKEIVMYAY FKKLDYFSTE
      241 CIYSPNAYRG FAREFIKDLE RIRPRAILDI IKSGEDFRIA TTTKMPEQGT CERCGYISSQ
      301 KWCKACVLLE GLNRGLPKMG IGRPRGVNGD HNKETKKPGS VAKSIESKQC GSLDF
//