LOCUS AEC10357.1 529 aa PRT PLN 23-MAR-2023 DEFINITION Arabidopsis thaliana RNA-binding protein protein. ACCESSION CP002685-6794 PROTEIN_ID AEC10357.1 SOURCE Arabidopsis thaliana (thale cress) ORGANISM Arabidopsis thaliana Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis. REFERENCE 1 (bases 1 to 19698289) AUTHORS Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D., Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V., Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L., Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L., Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H., Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D., Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and Venter,J.C. TITLE Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana JOURNAL Nature 402 (6763), 761-768 (1999) PUBMED 10617197 REFERENCE 2 (bases 1 to 19698289) AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E. CONSRTM TAIR TITLE Direct Submission JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie Institution, 260 Panama Street, Stanford, CA, USA REFERENCE 3 (bases 1 to 19698289) AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M., Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R., Vaughn,M. and Town,C.D. TITLE Direct Submission JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute, 9704 Medical Center Dr, Rockville, MD 20850, USA REMARK Protein update by submitter FEATURES Qualifiers source /organism="Arabidopsis thaliana" /mol_type="genomic DNA" /db_xref="taxon:3702" /chromosome="2" /ecotype="Columbia" protein /gene="LARP6b" /locus_tag="AT2G43970" /gene_synonym="AtLARP6b" /gene_synonym="F6E13.10" /gene_synonym="La related protein 6b" /inference="Similar to RNA sequence, EST:INSD:BP787459.1,INSD:T42611.1,INSD:EH937943.1, INSD:BP575538.1,INSD:EL126105.1,INSD:BP614627.1, INSD:BP599726.1,INSD:BP606885.1,INSD:EL000628.1, INSD:BU636181.1,INSD:AV818194.1,INSD:EL333145.1, INSD:EL341401.1,INSD:AV797530.1,INSD:BP811512.1, INSD:BP615191.1,INSD:EG523247.1,INSD:BP575854.1, INSD:BP583016.1,INSD:AA597727.1,INSD:EL212537.1, INSD:EL242437.1,INSD:EL266247.1,INSD:ES001356.1, INSD:EH848964.1,INSD:AV525463.1,INSD:BP833592.1, INSD:BP612517.1,INSD:EH945289.1,INSD:BP866038.1, INSD:BP865792.1,INSD:BP605779.1,INSD:EH854943.1, INSD:AV803580.1,INSD:EH960401.1,INSD:EL312272.1, INSD:CD533712.1,INSD:EG528259.1,INSD:EH848225.1, INSD:EH882431.1,INSD:BP787028.1,INSD:BP848521.1, INSD:BP603073.1,INSD:EL317797.1,INSD:AV520978.1, INSD:BP631841.1,INSD:EG523257.1,INSD:AV826200.1, INSD:BP621244.1,INSD:N37655.1,INSD:Z26004.1, INSD:BP844112.1,INSD:BP784289.1,INSD:BP605742.1, INSD:ES192770.1,INSD:EH977070.1,INSD:BP843182.1, INSD:EH898554.1,INSD:AV537123.1,INSD:BP852676.1, INSD:BP575384.1,INSD:EL131197.1,INSD:CF652593.1, INSD:BP579457.1,INSD:ES005639.1,INSD:EG513487.1, INSD:BP855067.1,INSD:EH903858.1,INSD:BP858593.1, INSD:BP825099.1,INSD:EL329793.1,INSD:BP583184.1, INSD:BP582081.1,INSD:ES031462.1,INSD:EH798544.1, INSD:EL231991.1,INSD:CB256334.1,INSD:BP865022.1, INSD:BP614680.1,INSD:ES149238.1,INSD:AV793553.1, INSD:BP599704.1,INSD:CB257690.1,INSD:BP845386.1, INSD:BP649272.1,INSD:BP607685.1,INSD:EL102541.1, INSD:BP659550.1,INSD:EH925120.1,INSD:BP587272.1, INSD:EL074018.1,INSD:BP589051.1,INSD:AV795915.1, INSD:AV821141.1,INSD:ES109457.1,INSD:CB256332.1, INSD:BP843590.1,INSD:EH805769.1,INSD:AV805696.1, INSD:EL257590.1,INSD:ES147993.1,INSD:BP605642.1, INSD:BP846560.1,INSD:EL086454.1,INSD:ES186360.1, INSD:N97211.1,INSD:T76846.1,INSD:BP612913.1, INSD:AV809231.1,INSD:AV540408.1,INSD:EL255869.1, INSD:BP622283.1,INSD:BP842043.1,INSD:BP599646.1, INSD:T76715.1,INSD:BP619220.1,INSD:ES180407.1, INSD:BP610116.1,INSD:EH978598.1,INSD:EG486261.1, INSD:EG434024.1,INSD:BP798932.2,INSD:ES209453.1, INSD:EH930209.1,INSD:EL185702.1,INSD:BP794552.1, INSD:EH914151.1,INSD:EL284807.1,INSD:EL263886.1, INSD:EL979582.1,INSD:EH870582.1,INSD:DR263174.1, INSD:AI994349.1,INSD:BP596291.1,INSD:EL015556.1, INSD:BP618359.1,INSD:DR232479.1,INSD:EG430452.1, INSD:BP583463.1,INSD:BP601262.1,INSD:EH993198.1, INSD:BP574999.1,INSD:EH927309.1,INSD:BP671948.1, INSD:EL293385.1,INSD:BP671075.1,INSD:EL088784.1, INSD:N96745.1,INSD:CB256333.1,INSD:EL120283.1, INSD:EG496244.1,INSD:EG513479.1,INSD:EL976805.1, INSD:BP618247.1,INSD:BP566001.1,INSD:BP575949.1, INSD:EG513480.1,INSD:DR263171.1,INSD:BP782241.1, INSD:BP856051.1,INSD:EL217653.1,INSD:CK120321.1, INSD:AV522392.1,INSD:BP644552.1,INSD:EL151466.1, INSD:AV827861.1,INSD:DR370038.1,INSD:BP627855.1, INSD:BP668902.1,INSD:AV542209.1,INSD:BP612619.1, INSD:BP582881.1,INSD:BP635380.1,INSD:EG523255.1, INSD:EL186808.1,INSD:BP803213.1,INSD:BP804808.1, INSD:AV538803.1,INSD:BP800187.1,INSD:EH989744.1, INSD:BP564651.1,INSD:BP780422.1,INSD:ES151681.1, INSD:EH953632.1,INSD:EH830664.1,INSD:EH951539.1, INSD:BU635153.1,INSD:EH894436.1,INSD:EL241628.1, INSD:BP568975.1,INSD:EG525486.1,INSD:BP628490.1, INSD:EL291471.1,INSD:BP613110.1,INSD:EG525087.1, INSD:BP611416.1,INSD:AV527192.1,INSD:BP645812.1, INSD:EL009303.1,INSD:EL325602.1,INSD:BP600208.1, INSD:BP611686.1,INSD:AV805697.1,INSD:R83971.1, INSD:BP617246.1,INSD:BP815908.1,INSD:BP853461.1, INSD:EH971898.1,INSD:BP565700.1,INSD:BP860139.1, INSD:EG520370.1,INSD:EH858451.1,INSD:BP861528.1, INSD:EG528260.1,INSD:BP599333.1,INSD:AV787550.1, INSD:EL119534.1,INSD:BP615788.1,INSD:AV552784.1, INSD:BP855293.1,INSD:BP579060.1,INSD:EH917789.1, INSD:AV544182.1,INSD:EL233000.1,INSD:BP634182.1, INSD:BP575845.1,INSD:BP600437.1,INSD:AV793963.1, INSD:BP613434.1,INSD:EH892330.1,INSD:BP600502.1, INSD:BP817780.1,INSD:EL129473.1,INSD:BP616896.1, INSD:EH861391.1,INSD:BP807799.1,INSD:EL228458.1, INSD:BP793416.1,INSD:EH955591.1,INSD:BP841828.1, INSD:EH817222.1,INSD:EL119771.1,INSD:BP787973.1, INSD:BP666255.1,INSD:BP652835.1,INSD:BP644695.1, INSD:BP632842.1,INSD:EL103799.1,INSD:EH859256.1, INSD:BP782266.1,INSD:BP662583.1,INSD:EH852115.1, INSD:ES139280.1,INSD:BP809479.1,INSD:BP617047.1, INSD:ES103544.1,INSD:EL021501.1,INSD:BP672013.1, INSD:BP623353.1,INSD:BP860311.1,INSD:BP592340.1, INSD:EG520438.1,INSD:EL019264.1,INSD:AV811621.1, INSD:BP795343.1,INSD:BP616802.1,INSD:AV831922.1, INSD:AV544281.1,INSD:EH850869.1,INSD:EL164405.1, INSD:BP627841.1,INSD:EH877599.1,INSD:BP621677.1, INSD:EL111302.1,INSD:AV795891.1,INSD:BP830217.1, INSD:BP599723.1,INSD:EH822993.1,INSD:AV520746.1, INSD:BP619299.1,INSD:EH895826.1,INSD:AV799648.1, INSD:BP606500.1,INSD:BP812375.1,INSD:EG513488.1, INSD:AV808870.1,INSD:EL250227.1,INSD:BP800412.1, INSD:EH867402.1,INSD:AV554528.1,INSD:DR263173.1, INSD:EL079143.1,INSD:BP808046.1,INSD:EH958883.1, INSD:AI099519.1,INSD:BP600611.1,INSD:BU636527.1, INSD:EL071588.1,INSD:BP602205.1,INSD:AV524649.1, INSD:BP578220.1,INSD:AV527375.1,INSD:EL184387.1, INSD:ES034330.1,INSD:CF651878.1,INSD:AV554239.1, INSD:BP864165.1,INSD:BP580472.1,INSD:ES096948.1, INSD:AV551124.1,INSD:EH944478.1,INSD:AV829910.1, INSD:EG440549.1,INSD:BU636284.1,INSD:DR263175.1, INSD:BP630080.1,INSD:EH940817.1,INSD:EL994612.1, INSD:EL247840.1,INSD:AV563576.1,INSD:DR263172.1, INSD:BP630774.1,INSD:DR263170.1,INSD:DR263176.1, INSD:BP576059.1,INSD:EL017446.1,INSD:ES153034.1, INSD:BP858246.1,INSD:BP570768.1,INSD:EL109537.1, INSD:AV548494.1,INSD:EL251659.1,INSD:CA963929.1, INSD:EL172914.1,INSD:BP616745.1,INSD:EH818774.1, INSD:EL248810.1,INSD:AV545506.1,INSD:BP597908.1, INSD:BP803125.1,INSD:BP650764.1,INSD:BP661964.1, INSD:BP603209.1,INSD:EH846919.1,INSD:ES134274.1, INSD:EG486260.1,INSD:BP608075.1,INSD:BP576716.1, INSD:BP781400.1,INSD:AV546056.1,INSD:EH837636.1, INSD:BP781999.1,INSD:EL128504.1,INSD:EL341553.1, INSD:AV527541.1,INSD:BP589876.1,INSD:BP632054.1, INSD:BP843781.1,INSD:BP602524.1,INSD:ES173888.1, INSD:EL130285.1,INSD:EL033553.1,INSD:EG523246.1, INSD:BP623036.1,INSD:EL237369.1,INSD:AV540365.1, INSD:BP616959.1,INSD:AV791509.1,INSD:BP787869.1, INSD:ES180642.1,INSD:AV827210.1,INSD:BP783769.1, INSD:BP601459.1,INSD:BP619681.1" /inference="similar to RNA sequence, mRNA:INSD:BX821563.1" /note="RNA-binding protein; FUNCTIONS IN: RNA binding, nucleic acid binding; INVOLVED IN: RNA processing; LOCATED IN: ribonucleoprotein complex, nucleus, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), RNA-binding protein Lupus La (InterPro:IPR006630), Lupus La protein (InterPro:IPR002344); BEST Arabidopsis thaliana protein match is: RNA-binding protein (TAIR:AT3G19090.1); Has 5536 Blast hits to 4258 proteins in 377 species: Archae - 4; Bacteria - 395; Metazoa - 1833; Fungi - 479; Plants - 433; Viruses - 20; Other Eukaryotes - 2372 (source: NCBI BLink)." /db_xref="Araport:AT2G43970" /db_xref="TAIR:AT2G43970" intron_pos 201:0 (1/8) intron_pos 228:1 (2/8) intron_pos 260:0 (3/8) intron_pos 284:0 (4/8) intron_pos 310:2 (5/8) intron_pos 345:0 (6/8) intron_pos 368:0 (7/8) intron_pos 422:0 (8/8) BEGIN 1 MADQQTLDSS TPPPTQSDDL SHSHSTSSTT SASSSSDPSL LRSLSLSRLN AGAPEFVPGR 61 TTPPLPQPPR MIIPPPPPHG MLHMYHHQPP FNTPVLGPVP IQPHLVPVQN HHPHHRFHQH 121 HHHNRHQNQQ YVPVRNHGEY QQRGGVGGEQ EPDLVSKKND RRDHSKRESK NDQVTETGAS 181 VSIDSKTGLP EDSIQKIVNQ VEYYFSDLNL ATTDHLMRFI CKDPEGYVPI HVVASFKKIK 241 AVINNNSQLA AVLQNSAKLF VSEDGKKVRR ISPITESAIE ELQSRIIVAE NLPEDHCYQN 301 LMKIFSTVGS VKNIRTCQPQ NNGSGAPPAA RSAAKSDGTL FSNKVTELSE AGNWRSGLKV 361 RLMLKHQTKE PKQGQGRGRK GHDADVEHEE DDATTSEQQP IEKQSDDCSG EWDTHMQEQP 421 IGEDQGNEKA AGQRKGRNRG RGKGRGRGQP HQNQNQNNNH SHNQNHNHNG RGNHHHHHHH 481 QVGTQPSNNP MNNMEQPGMG KQQPPGPRMP DGTRGFSMGR GKPVMVQAE //