LOCUS       AEC10257.1               333 aa    PRT              PLN 23-MAR-2023
DEFINITION  Arabidopsis thaliana RNA-binding (RRM/RBD/RNP motifs)
            family protein protein.
ACCESSION   CP002685-6656
PROTEIN_ID  AEC10257.1
SOURCE      Arabidopsis thaliana (thale cress)
  ORGANISM  Arabidopsis thaliana
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
            Camelineae; Arabidopsis.
REFERENCE   1  (bases 1 to 19698289)
  AUTHORS   Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
            Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
            Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
            Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
            Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
            Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
            Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
            Venter,J.C.
  TITLE     Sequence and analysis of chromosome 2 of the plant Arabidopsis
            thaliana
  JOURNAL   Nature 402 (6763), 761-768 (1999)
   PUBMED   10617197
REFERENCE   2  (bases 1 to 19698289)
  AUTHORS   Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
  CONSRTM   TAIR
  TITLE     Direct Submission
  JOURNAL   Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
            Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE   3  (bases 1 to 19698289)
  AUTHORS   Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
            Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
            Vaughn,M. and Town,C.D.
  TITLE     Direct Submission
  JOURNAL   Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
            9704 Medical Center Dr, Rockville, MD 20850, USA
  REMARK    Protein update by submitter
FEATURES             Qualifiers
     source          /organism="Arabidopsis thaliana"
                     /mol_type="genomic DNA"
                     /db_xref="taxon:3702"
                     /chromosome="2"
                     /ecotype="Columbia"
     protein         /locus_tag="AT2G43370"
                     /gene_synonym="T1O24.11"
                     /inference="Similar to RNA sequence,
                     EST:INSD:EL209946.1,INSD:BP563066.2,INSD:EL294432.1,
                     INSD:BP629765.1,INSD:EL023038.1,INSD:AU230577.1,
                     INSD:BP798913.1,INSD:BP632204.1,INSD:BP808513.1,
                     INSD:AV828349.1,INSD:BP663382.1,INSD:AV801147.1,
                     INSD:ES068164.1,INSD:ES117800.1,INSD:BP842261.1,
                     INSD:BP637927.1,INSD:EL110559.1,INSD:DR275534.1,
                     INSD:ES021640.1,INSD:DR275535.1,INSD:EG514433.1"
                     /inference="similar to RNA sequence,
                     mRNA:INSD:AY114697.1,INSD:AY072388.1,INSD:AK118423.1"
                     /note="RNA-binding (RRM/RBD/RNP motifs) family protein;
                     FUNCTIONS IN: RNA binding, nucleotide binding, nucleic
                     acid binding; INVOLVED IN: biological_process unknown;
                     LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: RNA
                     recognition motif, RNP-1 (InterPro:IPR000504),
                     Nucleotide-binding, alpha-beta plait (InterPro:IPR012677);
                     BEST Arabidopsis thaliana protein match is: U1 small
                     nuclear ribonucleoprotein-70K (TAIR:AT3G50670.1); Has 272
                     Blast hits to 272 proteins in 16 species: Archae - 0;
                     Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 270;
                     Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink)."
                     /db_xref="Araport:AT2G43370"
                     /db_xref="TAIR:AT2G43370"
     intron_pos      50:1 (1/7)
     intron_pos      83:0 (2/7)
     intron_pos      100:1 (3/7)
     intron_pos      124:0 (4/7)
     intron_pos      154:1 (5/7)
     intron_pos      179:2 (6/7)
     intron_pos      206:0 (7/7)
BEGIN
        1 MSGGGNNVVN KVFYATSYHP IQAGSIDGTD VAPHDNGVRR ALLCYNAGLY DPSGDSKAVG
       61 DPYCTLFVGR LSHHTTEDTL REVMSKYGRI KNLRLVRHIV TGASRGYGFV EYETEKEMLR
      121 AYEDAHHSLI DGREIIVDYN RQQLMPGWIP RRLGGGLGGR KESGQLRFGG RDRPFRAPLR
      181 PIPHEDLKKL GIQLPPEGRY MSRTQIPSPP RRKGSVSDRE EEYYREKSSV EREEEFKERS
      241 SLRSYHSHRS SAHTHSSHRR RSKDREECSR EESRSDRKER ARGMEDRYGD NKGEVSGSKR
      301 SKRSEEDRSR KRHKHLPSHH HRRSYSQDHH SSD
//