LOCUS AEC10009.1 312 aa PRT PLN 23-MAR-2023 DEFINITION Arabidopsis thaliana transcription factor IIB protein. ACCESSION CP002685-6322 PROTEIN_ID AEC10009.1 SOURCE Arabidopsis thaliana (thale cress) ORGANISM Arabidopsis thaliana Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis. REFERENCE 1 (bases 1 to 19698289) AUTHORS Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D., Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V., Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L., Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L., Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H., Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D., Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and Venter,J.C. TITLE Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana JOURNAL Nature 402 (6763), 761-768 (1999) PUBMED 10617197 REFERENCE 2 (bases 1 to 19698289) AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E. CONSRTM TAIR TITLE Direct Submission JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie Institution, 260 Panama Street, Stanford, CA, USA REFERENCE 3 (bases 1 to 19698289) AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M., Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R., Vaughn,M. and Town,C.D. TITLE Direct Submission JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute, 9704 Medical Center Dr, Rockville, MD 20850, USA REMARK Protein update by submitter FEATURES Qualifiers source /organism="Arabidopsis thaliana" /mol_type="genomic DNA" /db_xref="taxon:3702" /chromosome="2" /ecotype="Columbia" protein /gene="TFIIB" /locus_tag="AT2G41630" /gene_synonym="AtTFIIB1" /gene_synonym="T32G6.15" /gene_synonym="T32G6_15" /gene_synonym="TFIIB1" /gene_synonym="transcription factor IIB" /gene_synonym="transcription factor IIB 1" /gene_synonym="TRANSCRIPTION FACTOR TFIIB" /inference="Similar to RNA sequence, EST:INSD:DR307516.1,INSD:BP591443.1,INSD:CB252208.1, INSD:DR307518.1,INSD:BP639471.1,INSD:BP619735.1, INSD:AV555864.1,INSD:EL295218.1,INSD:AI996903.1, INSD:DR307519.1,INSD:BP782516.1,INSD:DR307520.1, INSD:DR307512.1,INSD:AV790518.1,INSD:EG528027.1, INSD:ES170806.1,INSD:BP842759.1,INSD:ES107441.1, INSD:BP611616.1,INSD:BP805367.1,INSD:DR307509.1, INSD:EL041572.1,INSD:BP638116.1,INSD:AV825210.1, INSD:EL145992.1,INSD:EL256636.1,INSD:DR212423.1, INSD:AV818654.1,INSD:ES182786.1,INSD:EL138110.1, INSD:EH935477.1,INSD:AV564968.1,INSD:BP589411.1, INSD:BP594166.1,INSD:EG528026.1,INSD:DR307511.1, INSD:DR307513.1,INSD:DR307514.1,INSD:ES210157.1, INSD:EL239025.1,INSD:EL082034.1,INSD:AV559133.1, INSD:EH943329.1,INSD:DR307515.1,INSD:DR307517.1, INSD:BX839300.1,INSD:BX840702.1,INSD:DR370409.1, INSD:DR307510.1" /inference="similar to RNA sequence, mRNA:INSD:BX820749.1,INSD:U31096.1,INSD:AY128769.1, INSD:AY463600.1,INSD:BX819960.1,INSD:AY093060.1, INSD:BX819880.1,INSD:AY086647.1" /note="transcription factor IIB (TFIIB); FUNCTIONS IN: RNA polymerase II transcription factor activity, transcription regulator activity, zinc ion binding, translation initiation factor activity; INVOLVED IN: translational initiation, regulation of transcription, DNA-dependent, transcription initiation, regulation of transcription; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor TFIIB related (InterPro:IPR000812), Cyclin-like (InterPro:IPR011028), Transcription factor TFIIB, cyclin-related (InterPro:IPR013150), Zinc finger, TFIIB-type (InterPro:IPR013137), Cyclin-related (InterPro:IPR013763), Cyclin (InterPro:IPR006670); BEST Arabidopsis thaliana protein match is: Cyclin-like family protein (TAIR:AT3G10330.1); Has 1967 Blast hits to 1965 proteins in 361 species: Archae - 538; Bacteria - 1; Metazoa - 305; Fungi - 294; Plants - 195; Viruses - 14; Other Eukaryotes - 620 (source: NCBI BLink)." /db_xref="Araport:AT2G41630" /db_xref="TAIR:AT2G41630" intron_pos 118:2 (1/6) intron_pos 127:0 (2/6) intron_pos 170:1 (3/6) intron_pos 214:0 (4/6) intron_pos 243:2 (5/6) intron_pos 269:1 (6/6) BEGIN 1 MSDAYCTDCK KETELVVDHS AGDTLCSECG LVLESHSIDE TSEWRTFANE SSNSDPNRVG 61 GPTNPLLADS ALTTVIAKPN GSSGDFLSSS LGRWQNRNSN SDRGLIQAFK TIATMSERLG 121 LVATIKDRAN ELYKRLEDQK SSRGRNQDAL YAACLYIACR QEDKPRTIKE ICVIANGATK 181 KEIGRAKDYI VKTLGLEPGQ SVDLGTIHAG DFMRRFCSNL AMSNHAVKAA QEAVQKSEEF 241 DIRRSPISIA AVVIYIITQL SDDKKTLKDI SHATGVAEGT IRNSYKDLYP HLSKIAPSWY 301 AKEEDLKNLS SP //