LOCUS       AEC09999.1               475 aa    PRT              PLN 23-MAR-2023
DEFINITION  Arabidopsis thaliana Rho termination factor protein.
ACCESSION   CP002685-6307
PROTEIN_ID  AEC09999.1
SOURCE      Arabidopsis thaliana (thale cress)
  ORGANISM  Arabidopsis thaliana
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
            Camelineae; Arabidopsis.
REFERENCE   1  (bases 1 to 19698289)
  AUTHORS   Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
            Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
            Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
            Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
            Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
            Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
            Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
            Venter,J.C.
  TITLE     Sequence and analysis of chromosome 2 of the plant Arabidopsis
            thaliana
  JOURNAL   Nature 402 (6763), 761-768 (1999)
   PUBMED   10617197
REFERENCE   2  (bases 1 to 19698289)
  AUTHORS   Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
  CONSRTM   TAIR
  TITLE     Direct Submission
  JOURNAL   Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
            Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE   3  (bases 1 to 19698289)
  AUTHORS   Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
            Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
            Vaughn,M. and Town,C.D.
  TITLE     Direct Submission
  JOURNAL   Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
            9704 Medical Center Dr, Rockville, MD 20850, USA
  REMARK    Protein update by submitter
FEATURES             Qualifiers
     source          /organism="Arabidopsis thaliana"
                     /mol_type="genomic DNA"
                     /db_xref="taxon:3702"
                     /chromosome="2"
                     /ecotype="Columbia"
     protein         /locus_tag="AT2G41550"
                     /gene_synonym="T32G6.7"
                     /gene_synonym="T32G6_7"
                     /inference="Similar to RNA sequence,
                     EST:INSD:AI995519.1,INSD:AU239638.1,INSD:ES209477.1,
                     INSD:EL992281.1,INSD:EH812183.1,INSD:ES181056.1,
                     INSD:EH924442.1,INSD:ES078306.1,INSD:ES131400.1,
                     INSD:ES157355.1,INSD:ES065051.1,INSD:ES140350.1,
                     INSD:ES179002.1,INSD:ES180915.1,INSD:EL978430.1,
                     INSD:ES119615.1,INSD:ES176492.1,INSD:ES025013.1,
                     INSD:EL971050.1,INSD:ES203744.1,INSD:ES059909.1,
                     INSD:BX840004.1,INSD:DR363431.1,INSD:EL225505.1,
                     INSD:AU230972.1,INSD:ES098318.1,INSD:ES087322.1,
                     INSD:EL997960.1,INSD:EL999285.1,INSD:ES148265.1,
                     INSD:AV533976.1,INSD:ES123231.1,INSD:DR380267.1,
                     INSD:BX835976.1,INSD:BE523733.1,INSD:ES143084.1,
                     INSD:ES196547.1,INSD:BX836332.1,INSD:ES169777.1,
                     INSD:ES039831.1"
                     /inference="similar to RNA sequence,
                     mRNA:INSD:AK118768.1,INSD:BT005497.1"
                     /note="Rho termination factor; FUNCTIONS IN: transcription
                     termination factor activity; INVOLVED IN: transcription
                     termination; LOCATED IN: cellular_component unknown;
                     EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 6
                     growth stages; CONTAINS InterPro DOMAIN/s: Rho termination
                     factor, N-terminal (InterPro:IPR011112); Has 1046 Blast
                     hits to 715 proteins in 227 species: Archae - 8; Bacteria
                     - 305; Metazoa - 330; Fungi - 184; Plants - 18; Viruses -
                     2; Other Eukaryotes - 199 (source: NCBI BLink)."
                     /db_xref="Araport:AT2G41550"
                     /db_xref="TAIR:AT2G41550"
     intron_pos      13:1 (1/4)
     intron_pos      39:1 (2/4)
     intron_pos      102:0 (3/4)
     intron_pos      173:0 (4/4)
BEGIN
        1 MDDDDDLWGP PRVFVVVQDD TFRKQTVRRC EFWFDFRTDV LEENFQNEKY CELVWRILTE
       61 KKRQVTEIAE LERVSVSVSA QNDTASSGSG GDLHEIDSSD SDKTLSTTLP DSDTSSAKLA
      121 LDDDENTSSI SDAQTAQTVQ IRDSSNDDTE DIEPETRLMP HETAANDPLT VEVAEDADTS
      181 SSPVLESKID EAEEHSCSSL VTDQVFDPIK QALENKSSSA ISRESIGGST LRPLHLETRE
      241 KANTTDEDGD ILKDHQQNDS LQDIVTVSEP FTTESLLEMC DEPDKGRDIP CGERSKKSHP
      301 EAVVKTVVKD ELIISLLTEA RKKAESKNPG SVLIKKRQRQ SNSSDNKGAN TSFIRNIKQK
      361 VQGGAGEINI DPVKNSTQST PKIIRGSSVP TQHADSLLDS SMDGKIQRGG KNVSGSLISL
      421 SISELKKKTG KELRSIAKDL KVQHYYKLKK EDLLQRITNQ LNPQLADCTK QRMES
//