LOCUS AEC09818.1 753 aa PRT PLN 23-MAR-2023 DEFINITION Arabidopsis thaliana Transducin/WD40 repeat-like superfamily protein protein. ACCESSION CP002685-6045 PROTEIN_ID AEC09818.1 SOURCE Arabidopsis thaliana (thale cress) ORGANISM Arabidopsis thaliana Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis. REFERENCE 1 (bases 1 to 19698289) AUTHORS Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D., Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V., Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L., Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L., Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H., Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D., Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and Venter,J.C. TITLE Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana JOURNAL Nature 402 (6763), 761-768 (1999) PUBMED 10617197 REFERENCE 2 (bases 1 to 19698289) AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E. CONSRTM TAIR TITLE Direct Submission JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie Institution, 260 Panama Street, Stanford, CA, USA REFERENCE 3 (bases 1 to 19698289) AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M., Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R., Vaughn,M. and Town,C.D. TITLE Direct Submission JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute, 9704 Medical Center Dr, Rockville, MD 20850, USA REMARK Protein update by submitter FEATURES Qualifiers source /organism="Arabidopsis thaliana" /mol_type="genomic DNA" /db_xref="taxon:3702" /chromosome="2" /ecotype="Columbia" protein /locus_tag="AT2G40360" /gene_synonym="T3G21.13" /gene_synonym="T3G21_13" /inference="Similar to RNA sequence, EST:INSD:BP649700.1,INSD:BP666408.1,INSD:BP650323.1, INSD:EL199725.1,INSD:EL988915.1,INSD:ES087130.1, INSD:DR295281.1,INSD:AV543642.1,INSD:ES050222.1, INSD:BP778799.1,INSD:BP818057.1,INSD:BP783402.1, INSD:DR381820.1,INSD:BP800852.1,INSD:BP608502.1, INSD:EL248880.1,INSD:AV811096.1,INSD:AV821823.1, INSD:AV792497.1,INSD:BP786883.1,INSD:AV793104.1, INSD:BP788544.1,INSD:EL111404.1,INSD:ES204117.1, INSD:BP639304.1,INSD:BP819151.1,INSD:BP660001.1, INSD:BE530545.1,INSD:BP613630.1,INSD:ES081693.1, INSD:AV808527.1,INSD:BP826724.1,INSD:EL998340.1, INSD:AV791452.1,INSD:BP640260.1,INSD:DR363818.1, INSD:EG501465.1,INSD:BP562258.1,INSD:EL256881.1, INSD:EL221843.1,INSD:AV548154.1,INSD:BP612736.1, INSD:T75849.1,INSD:DR355623.1,INSD:BP778498.1, INSD:BP667157.1,INSD:AV830360.1,INSD:BP641199.1, INSD:DR363819.1,INSD:BP790052.1,INSD:EH931218.1, INSD:BX835868.1,INSD:BP781581.1,INSD:BP668033.1, INSD:BP835628.1,INSD:BP830424.1,INSD:EL126290.1, INSD:BP784724.1,INSD:EL982429.1,INSD:DR355624.1, INSD:EH832218.1,INSD:T75850.1,INSD:DR356617.1, INSD:EH975532.1,INSD:ES043271.1,INSD:AI993334.1, INSD:AV809165.1,INSD:BP588077.1,INSD:EH973567.1, INSD:EL988879.1,INSD:ES118728.1,INSD:EH847191.1, INSD:EH938154.1,INSD:EH971959.1" /note="Transducin/WD40 repeat-like superfamily protein; FUNCTIONS IN: nucleotide binding; INVOLVED IN: rRNA processing; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), BOP1, N-terminal (InterPro:IPR012953), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: HEAT repeat; WD domain, G-beta repeat protein protein (TAIR:AT5G01770.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink)." /db_xref="Araport:AT2G40360" /db_xref="TAIR:AT2G40360" intron_pos 56:0 (1/13) intron_pos 97:1 (2/13) intron_pos 143:0 (3/13) intron_pos 194:2 (4/13) intron_pos 234:0 (5/13) intron_pos 320:1 (6/13) intron_pos 356:2 (7/13) intron_pos 391:0 (8/13) intron_pos 441:1 (9/13) intron_pos 485:2 (10/13) intron_pos 521:1 (11/13) intron_pos 543:0 (12/13) intron_pos 726:1 (13/13) BEGIN 1 MTKRSKGANE DKLIETKSKN VSGKSQKQKK PVEAESLKEE DLLQASGTDS DYDGDSLPGS 61 LNSDDFDSDF SDSEDDGTHE GTEDGDVEFS DDDDVLEHDG SIDNEDDDGS EHVGSDNNEE 121 HGSDEDSERG EAVEESDSSE DEVPSRNTVG NVPLKWYEDE KHIGYDLTGK KITKKEKQDK 181 LDSFLATIDD SKTWRKIYDE YNDEDVELTK EESKIVQRIL KGEAPHADFD PYAPYVEWFK 241 HDDAIHPLSS APEPKRRFIP SKWEAKKVVK IVRAIRKGWI KFDKPEEEPN VYLLWGDDST 301 SDQKSKHLTY IPPPKLKLPG HDESYNPSLE YIPTEEEKAS YELMFEEDRP KFIPTRFTSL 361 RSIPAYENAL KESFERCLDL YLCPRVRKKR INIDPESLKP KLPSRKDLRP YPNSCYLEYK 421 GHTGAVTSIS TDSSGEWIAS GSTDGSVRMW EVETGRCLKV WQFDEAIMCV AWNPLSRLPV 481 LAVAMGRDLF FLNTELGTDE EQEITKERLH SGNIPEPDAS VAAIVTWLPD ELYGGIKIRH 541 FKSISSIDWH RKGDYLSTVM ASGETRGVVL HQLSKQKTQR LPFKIRGLPV CTLFHPSLSY 601 FFVATRKDVR VYNLLKPGEA TKKLETGLRE ISSMAIHPGG DNLIVGSKEG KMCWFDMDLS 661 SKPYKTLKNH PKDITNVAVH RSYPLFASCS EDSTAYVFHG MVYNDLNQNP LIVPLEILRG 721 HSSKGGVLDC KFHPRQPWLF TAGADSIIKL YCH //