LOCUS       AEC09556.1               286 aa    PRT              PLN 23-MAR-2023
DEFINITION  Arabidopsis thaliana RNA-binding KH domain-containing
            protein protein.
ACCESSION   CP002685-5670
PROTEIN_ID  AEC09556.1
SOURCE      Arabidopsis thaliana (thale cress)
  ORGANISM  Arabidopsis thaliana
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
            Camelineae; Arabidopsis.
REFERENCE   1  (bases 1 to 19698289)
  AUTHORS   Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
            Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
            Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
            Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
            Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
            Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
            Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
            Venter,J.C.
  TITLE     Sequence and analysis of chromosome 2 of the plant Arabidopsis
            thaliana
  JOURNAL   Nature 402 (6763), 761-768 (1999)
   PUBMED   10617197
REFERENCE   2  (bases 1 to 19698289)
  AUTHORS   Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
  CONSRTM   TAIR
  TITLE     Direct Submission
  JOURNAL   Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
            Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE   3  (bases 1 to 19698289)
  AUTHORS   Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
            Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
            Vaughn,M. and Town,C.D.
  TITLE     Direct Submission
  JOURNAL   Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
            9704 Medical Center Dr, Rockville, MD 20850, USA
  REMARK    Protein update by submitter
FEATURES             Qualifiers
     source          /organism="Arabidopsis thaliana"
                     /mol_type="genomic DNA"
                     /db_xref="taxon:3702"
                     /chromosome="2"
                     /ecotype="Columbia"
     protein         /locus_tag="AT2G38610"
                     /gene_synonym="T6A23.19"
                     /gene_synonym="T6A23_19"
                     /inference="Similar to RNA sequence,
                     EST:INSD:EH872613.1,INSD:BP593066.1,INSD:DR210069.1,
                     INSD:EL990202.1,INSD:AV785068.1,INSD:DR210070.1,
                     INSD:BP590658.1,INSD:EL197850.1,INSD:DR210072.1,
                     INSD:AV821052.1,INSD:EH835317.1,INSD:AV540796.1,
                     INSD:BX839732.1,INSD:ES141040.1,INSD:AA395262.1,
                     INSD:DR210077.1,INSD:AV786904.1,INSD:ES214141.1,
                     INSD:BX836716.1,INSD:BP631691.1,INSD:DR210074.1,
                     INSD:EL151650.1,INSD:BP625780.1,INSD:EH900881.1,
                     INSD:BP621522.1,INSD:AV819698.1,INSD:DR210075.1,
                     INSD:CD528982.1,INSD:AV519191.1,INSD:AV563211.1,
                     INSD:T42967.1,INSD:ES211207.1,INSD:BP621173.1,
                     INSD:DR210071.1,INSD:EL186770.1,INSD:BX835760.1,
                     INSD:EL995079.1,INSD:BP599431.1,INSD:BP652573.1,
                     INSD:EH962596.1,INSD:BP602499.1,INSD:BX841136.1,
                     INSD:CF651297.1,INSD:EH897353.1,INSD:EH802972.1,
                     INSD:AV525588.1,INSD:DR379077.1,INSD:EL102040.1,
                     INSD:CF651296.1,INSD:AV823969.1,INSD:BE529755.1,
                     INSD:DR353912.1,INSD:ES110760.1,INSD:EH853383.1,
                     INSD:EH883512.1,INSD:BX839335.1,INSD:EL306895.1,
                     INSD:CA781400.1"
                     /inference="similar to RNA sequence,
                     mRNA:INSD:BX819525.1,INSD:BX820345.1,INSD:AY065112.1,
                     INSD:AY064682.1,INSD:BT000084.1"
                     /note="RNA-binding KH domain-containing protein; FUNCTIONS
                     IN: RNA binding, nucleic acid binding; INVOLVED IN:
                     biological_process unknown; LOCATED IN: cellular_component
                     unknown; EXPRESSED IN: 23 plant structures; EXPRESSED
                     DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: K
                     Homology (InterPro:IPR004087), K Homology, type 1,
                     subgroup (InterPro:IPR018111); BEST Arabidopsis thaliana
                     protein match is: RNA-binding KH domain-containing protein
                     (TAIR:AT3G08620.1); Has 1345 Blast hits to 1344 proteins
                     in 222 species: Archae - 0; Bacteria - 0; Metazoa - 813;
                     Fungi - 157; Plants - 284; Viruses - 0; Other Eukaryotes -
                     91 (source: NCBI BLink)."
                     /db_xref="Araport:AT2G38610"
                     /db_xref="TAIR:AT2G38610"
     intron_pos      29:2 (1/6)
     intron_pos      60:1 (2/6)
     intron_pos      111:0 (3/6)
     intron_pos      150:0 (4/6)
     intron_pos      189:0 (5/6)
     intron_pos      237:0 (6/6)
BEGIN
        1 MSGLYNNSSY FSPARAASPQ IRSTPEIDSS QYLTELLAEH QKLTPFMQVL PICSRLLNQE
       61 MFRVSGMMSN QGFGDFDRLR HRSPSPMASS NLMSNVSNTG LGGWNGLSQE RLSGTPGMTM
      121 DWQGAPGSPS SYTVKRILRL EIPVDNYPNF NFVGRLLGPR GNSLKRVEAT TGCRVFIRGK
      181 GSIKDPEKED KLRGRPGYEH LNEQLHILIE ADLPASIVEI RLRQAQEIIE ELLKPVDESQ
      241 DFIKRQQLRE LALLNSNNLR EESPGPSGGG SVSPFNSSGK RPKTGC
//