LOCUS       AEC09550.1               378 aa    PRT              PLN 23-MAR-2023
DEFINITION  Arabidopsis thaliana transcript elongation factor IIS protein.
ACCESSION   CP002685-5660
PROTEIN_ID  AEC09550.1
SOURCE      Arabidopsis thaliana (thale cress)
  ORGANISM  Arabidopsis thaliana
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
            Camelineae; Arabidopsis.
REFERENCE   1  (bases 1 to 19698289)
  AUTHORS   Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
            Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
            Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
            Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
            Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
            Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
            Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
            Venter,J.C.
  TITLE     Sequence and analysis of chromosome 2 of the plant Arabidopsis
            thaliana
  JOURNAL   Nature 402 (6763), 761-768 (1999)
   PUBMED   10617197
REFERENCE   2  (bases 1 to 19698289)
  AUTHORS   Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
  CONSRTM   TAIR
  TITLE     Direct Submission
  JOURNAL   Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
            Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE   3  (bases 1 to 19698289)
  AUTHORS   Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
            Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
            Vaughn,M. and Town,C.D.
  TITLE     Direct Submission
  JOURNAL   Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
            9704 Medical Center Dr, Rockville, MD 20850, USA
  REMARK    Protein update by submitter
FEATURES             Qualifiers
     source          /organism="Arabidopsis thaliana"
                     /mol_type="genomic DNA"
                     /db_xref="taxon:3702"
                     /chromosome="2"
                     /ecotype="Columbia"
     protein         /gene="TFIIS"
                     /locus_tag="AT2G38560"
                     /gene_synonym="RDO2"
                     /gene_synonym="REDUCED DORMANCY 2"
                     /gene_synonym="T6A23.24"
                     /gene_synonym="T6A23_24"
                     /gene_synonym="transcript elongation factor IIS"
                     /inference="Similar to RNA sequence,
                     EST:INSD:BP848975.1,INSD:ES058733.1,INSD:BE522150.1,
                     INSD:AV546988.1,INSD:AV543355.1,INSD:ES023881.1,
                     INSD:EL038281.1,INSD:EH848773.1,INSD:AV562318.1,
                     INSD:DR280176.1,INSD:DR280177.1,INSD:ES043285.1,
                     INSD:ES167945.1,INSD:AV525790.1,INSD:DR280174.1,
                     INSD:BP631013.1,INSD:AU229579.1,INSD:BP562361.2,
                     INSD:ES062050.1,INSD:DR280175.1,INSD:AV820132.1,
                     INSD:DR362441.1,INSD:ES153134.1,INSD:ES200691.1,
                     INSD:BP796474.1,INSD:EH879719.1,INSD:ES186980.1,
                     INSD:ES054956.1,INSD:ES121919.1,INSD:AV556602.1,
                     INSD:DR382820.1,INSD:AV566553.1,INSD:BP601879.1,
                     INSD:DR381697.1,INSD:ES157580.1,INSD:BP603795.1,
                     INSD:AU238395.1,INSD:AV813111.1,INSD:ES041267.1,
                     INSD:EL112746.1,INSD:EH851938.1"
                     /inference="similar to RNA sequence,
                     mRNA:INSD:BX819126.1,INSD:BX818815.1,INSD:BX819740.1,
                     INSD:AY074322.1,INSD:AY150517.1,INSD:AK117557.1"
                     /note="transcript elongation factor IIS (TFIIS); CONTAINS
                     InterPro DOMAIN/s: Zinc finger, TFIIS-type
                     (InterPro:IPR001222), Transcription elongation factor,
                     TFIIS/CRSP70, N-terminal, sub-type (InterPro:IPR003617),
                     Transcription elongation factor S-II, central domain
                     (InterPro:IPR003618), Transcription factor IIS, N-terminal
                     (InterPro:IPR017923), Transcription elongation factor
                     S-IIM (InterPro:IPR017890), Transcription elongation
                     factor, IIS (InterPro:IPR016492), Transcription elongation
                     factor, TFIIS (InterPro:IPR006289), Transcription
                     elongation factor, TFIIS/elongin A/CRSP70, N-terminal
                     (InterPro:IPR010990); BEST Arabidopsis thaliana protein
                     match is: F-box family protein (TAIR:AT2G42730.1); Has
                     1858 Blast hits to 1830 proteins in 294 species: Archae -
                     58; Bacteria - 2; Metazoa - 702; Fungi - 370; Plants -
                     279; Viruses - 52; Other Eukaryotes - 395 (source: NCBI
                     BLink)."
                     /db_xref="Araport:AT2G38560"
                     /db_xref="TAIR:AT2G38560"
     intron_pos      56:0 (1/1)
BEGIN
        1 MESDLIDLFE GAKKAADAAA LDGVTSSGPE VSQCIDALKQ LKKFPVTYDT LVATQVGKKL
       61 RSLAKHPVED IKSVATDLLE IWKKVVIEET AKAKKTEGTN GCKEAKVNKM DVEKPSNPAP
      121 VKVQKLQRGD SAKSIKVERK EPDNKVVTGV KIERKVPDIK VTNGTKIDYR GQAVKDEKVS
      181 KDNQSSMKAP AKAANAPPKL TAMLKCNDPV RDKIRELLVE ALCRVAGEAD DYERESVNAS
      241 DPLRVAVSVE SLMFEKLGRS TGAQKLKYRS IMFNLRDSNN PDLRRRVLTG EISPEKLITL
      301 SAEDMASDKR KQENNQIKEK ALFDCERGLA AKASTDQFKC GRCGQRKCTY YQMQTRSADE
      361 PMTTYVTCVN CDNHWKFC
//