LOCUS       AEC09510.1               404 aa    PRT              PLN 23-MAR-2023
DEFINITION  Arabidopsis thaliana RING/U-box superfamily protein protein.
ACCESSION   CP002685-5611
PROTEIN_ID  AEC09510.1
SOURCE      Arabidopsis thaliana (thale cress)
  ORGANISM  Arabidopsis thaliana
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
            Camelineae; Arabidopsis.
REFERENCE   1  (bases 1 to 19698289)
  AUTHORS   Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
            Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
            Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
            Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
            Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
            Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
            Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
            Venter,J.C.
  TITLE     Sequence and analysis of chromosome 2 of the plant Arabidopsis
            thaliana
  JOURNAL   Nature 402 (6763), 761-768 (1999)
   PUBMED   10617197
REFERENCE   2  (bases 1 to 19698289)
  AUTHORS   Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
  CONSRTM   TAIR
  TITLE     Direct Submission
  JOURNAL   Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
            Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE   3  (bases 1 to 19698289)
  AUTHORS   Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
            Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
            Vaughn,M. and Town,C.D.
  TITLE     Direct Submission
  JOURNAL   Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
            9704 Medical Center Dr, Rockville, MD 20850, USA
  REMARK    Protein update by submitter
FEATURES             Qualifiers
     source          /organism="Arabidopsis thaliana"
                     /mol_type="genomic DNA"
                     /db_xref="taxon:3702"
                     /chromosome="2"
                     /ecotype="Columbia"
     protein         /gene="APD3"
                     /locus_tag="AT2G38220"
                     /gene_synonym="ABERRANT POLLEN DEVELOPMENT 3"
                     /gene_synonym="F16M14.15"
                     /gene_synonym="F16M14_15"
                     /inference="Similar to RNA sequence,
                     EST:INSD:EG432864.1,INSD:EG432865.1,INSD:EG432867.1"
                     /note="RING/U-box superfamily protein; FUNCTIONS IN: zinc
                     ion binding; INVOLVED IN: biological_process unknown;
                     LOCATED IN: cellular_component unknown; CONTAINS InterPro
                     DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841);
                     BEST Arabidopsis thaliana protein match is: RING/U-box
                     superfamily protein (TAIR:AT2G38195.1); Has 30201 Blast
                     hits to 17322 proteins in 780 species: Archae - 12;
                     Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
                     5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
                     BLink)."
                     /db_xref="Araport:AT2G38220"
                     /db_xref="TAIR:AT2G38220"
     intron_pos      52:1 (1/9)
     intron_pos      88:0 (2/9)
     intron_pos      131:0 (3/9)
     intron_pos      162:1 (4/9)
     intron_pos      193:1 (5/9)
     intron_pos      221:0 (6/9)
     intron_pos      272:0 (7/9)
     intron_pos      297:1 (8/9)
     intron_pos      380:2 (9/9)
BEGIN
        1 MGSIRGDLQP LFVMPPPPLD EDCDDIFNSD ESSWGLLSLS CFGIIMGLWF FASVCLIFGV
       61 YGSETVWLGP NSSILVKPSS IFVKSIKVKE LDFSKPGLQL YGFNGQSTPS GYFVNWTESR
      121 VLSVSQNSYK GWPYYLNRGT HMNISYNILP KGSAVRLVIT EGSQVIGMPF FYRSSLKDIA
      181 FRDTAWSWNL IQGSGMIQLD ISKSKGYYLT VANLKRKDIE VELDIDVKAV LYDTKQTSYN
      241 CSFSNGECSF KMNERYPVEN YAVVTSPALG QGVSIDDEWY IELSYQPRLI AYGSFTGVLL
      301 SFMLVAIHFC NKLKCCGGEG FLSGDDSVRT CLLADKGDND CCNDVEASNK SLCAICFDAP
      361 RDCCFLPCGH CVSCYQCGTK IKRTKGRCPI CRKKMIHVKR IYTA
//