LOCUS       AEC08946.1               296 aa    PRT              PLN 23-MAR-2023
DEFINITION  Arabidopsis thaliana transducin family protein / WD-40
            repeat family protein protein.
ACCESSION   CP002685-4878
PROTEIN_ID  AEC08946.1
SOURCE      Arabidopsis thaliana (thale cress)
  ORGANISM  Arabidopsis thaliana
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
            Camelineae; Arabidopsis.
REFERENCE   1  (bases 1 to 19698289)
  AUTHORS   Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
            Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
            Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
            Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
            Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
            Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
            Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
            Venter,J.C.
  TITLE     Sequence and analysis of chromosome 2 of the plant Arabidopsis
            thaliana
  JOURNAL   Nature 402 (6763), 761-768 (1999)
   PUBMED   10617197
REFERENCE   2  (bases 1 to 19698289)
  AUTHORS   Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
  CONSRTM   TAIR
  TITLE     Direct Submission
  JOURNAL   Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
            Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE   3  (bases 1 to 19698289)
  AUTHORS   Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
            Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
            Vaughn,M. and Town,C.D.
  TITLE     Direct Submission
  JOURNAL   Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
            9704 Medical Center Dr, Rockville, MD 20850, USA
  REMARK    Protein update by submitter
FEATURES             Qualifiers
     source          /organism="Arabidopsis thaliana"
                     /mol_type="genomic DNA"
                     /db_xref="taxon:3702"
                     /chromosome="2"
                     /ecotype="Columbia"
     protein         /gene="WDR55"
                     /locus_tag="AT2G34260"
                     /gene_synonym="F13P17.10"
                     /gene_synonym="F13P17_10"
                     /gene_synonym="human WDR55 (WD40 repeat) homolog"
                     /inference="Similar to RNA sequence,
                     EST:INSD:DR375995.1,INSD:ES211304.1,INSD:ES212843.1,
                     INSD:ES059973.1,INSD:EH799581.1,INSD:ES171013.1"
                     /inference="similar to RNA sequence, mRNA:INSD:BX822014.1"
                     /note="transducin family protein / WD-40 repeat family
                     protein; FUNCTIONS IN: nucleotide binding; LOCATED IN:
                     CUL4 RING ubiquitin ligase complex, heterotrimeric
                     G-protein complex; EXPRESSED IN: 23 plant structures;
                     EXPRESSED DURING: 13 growth stages; CONTAINS InterPro
                     DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40
                     repeat-like-containing domain (InterPro:IPR011046), WD40
                     repeat, conserved site (InterPro:IPR019775),
                     WD40-repeat-containing domain (InterPro:IPR017986),
                     WD40/YVTN repeat-like-containing domain
                     (InterPro:IPR015943), WD40 repeat (InterPro:IPR001680),
                     WD40 repeat, subgroup (InterPro:IPR019781); BEST
                     Arabidopsis thaliana protein match is: Transducin/WD40
                     repeat-like superfamily protein (TAIR:AT3G49660.1); Has
                     35333 Blast hits to 34131 proteins in 2444 species: Archae
                     - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991;
                     Plants - 531; Viruses - 0; Other Eukaryotes - 9610
                     (source: NCBI BLink)."
                     /db_xref="Araport:AT2G34260"
                     /db_xref="TAIR:AT2G34260"
     intron_pos      37:2 (1/10)
     intron_pos      62:0 (2/10)
     intron_pos      97:2 (3/10)
     intron_pos      131:0 (4/10)
     intron_pos      156:2 (5/10)
     intron_pos      173:0 (6/10)
     intron_pos      188:2 (7/10)
     intron_pos      212:1 (8/10)
     intron_pos      231:0 (9/10)
     intron_pos      274:1 (10/10)
BEGIN
        1 MFFCWVLGIV TASADCSILA TDVETGAQVA HLENAHEDAV NTLINVTETT IASGDDKGCV
       61 KIWDTRQRSC SHEFNAHEDY ISGMTFASDS MKLVVTSGDG TLSVCNLRTS KVQSQSEFSE
      121 DELLSVVIMK NGRKVICGTQ NGTLLLYSWG FFKDCSDRFV DLAPNSVDAL LKLDEDRLIT
      181 GCDNGIISLV GILPNRIIQP IGSHDYPIED LALSHDKKFL GSTAHDSMLK LWNLEEILEG
      241 SNVNSGNASG AAEDSDSDND GMDLDNDPSK SSKGSKRKTK SKANTLNATN NFFADL
//