LOCUS AEC08442.1 1299 aa PRT PLN 23-MAR-2023 DEFINITION Arabidopsis thaliana helicase in vascular tissue and tapetum protein. ACCESSION CP002685-4192 PROTEIN_ID AEC08442.1 SOURCE Arabidopsis thaliana (thale cress) ORGANISM Arabidopsis thaliana Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis. REFERENCE 1 (bases 1 to 19698289) AUTHORS Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D., Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V., Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L., Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L., Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H., Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D., Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and Venter,J.C. TITLE Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana JOURNAL Nature 402 (6763), 761-768 (1999) PUBMED 10617197 REFERENCE 2 (bases 1 to 19698289) AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E. CONSRTM TAIR TITLE Direct Submission JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie Institution, 260 Panama Street, Stanford, CA, USA REFERENCE 3 (bases 1 to 19698289) AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M., Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R., Vaughn,M. and Town,C.D. TITLE Direct Submission JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute, 9704 Medical Center Dr, Rockville, MD 20850, USA REMARK Protein update by submitter FEATURES Qualifiers source /organism="Arabidopsis thaliana" /mol_type="genomic DNA" /db_xref="taxon:3702" /chromosome="2" /ecotype="Columbia" protein /gene="HVT1" /locus_tag="AT2G30800" /gene_synonym="ATVT-1" /gene_synonym="helicase in vascular tissue and tapetum" /inference="Similar to RNA sequence, EST:INSD:ES122483.1,INSD:AW004395.1,INSD:BE522239.1, INSD:BE522238.1,INSD:BP780087.1,INSD:EH940195.1, INSD:ES071443.1,INSD:BE525221.1,INSD:ES025029.1, INSD:AV546296.1,INSD:BE524746.1,INSD:EL061569.1, INSD:EL310641.1" /inference="similar to RNA sequence, mRNA:INSD:U10245.1,INSD:AK226731.1" /note="helicase in vascular tissue and tapetum (HVT1); CONTAINS InterPro DOMAIN/s: Helicase-associated domain (InterPro:IPR007502), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), Domain of unknown function DUF1605 (InterPro:IPR011709), Ankyrin repeat-containing domain (InterPro:IPR020683), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Single-stranded nucleic acid binding R3H (InterPro:IPR001374), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: nuclear DEIH-boxhelicase (TAIR:AT1G06670.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink)." /db_xref="Araport:AT2G30800" /db_xref="TAIR:AT2G30800" intron_pos 39:1 (1/13) intron_pos 69:2 (2/13) intron_pos 180:0 (3/13) intron_pos 205:0 (4/13) intron_pos 220:0 (5/13) intron_pos 251:1 (6/13) intron_pos 271:0 (7/13) intron_pos 313:0 (8/13) intron_pos 330:2 (9/13) intron_pos 342:0 (10/13) intron_pos 372:0 (11/13) intron_pos 707:0 (12/13) intron_pos 1079:0 (13/13) BEGIN 1 MGNKRFRSDN NAGKPTSVEA TRIWATKVIE DFRASGNEVY TFEHNLSNNE RGVIHQMCRK 61 MGIQSKSSGR GEQRRLSIFK SRHKNGNKNE ANEKSNKEKL KCVSFPPGAD VILQELFTHY 121 PPCDGDTAAT SFTKYSGNKG KQGQWKDDFF RKPQISSEEI LEKVASLSSR LKKDKALKEI 181 TKLRSKLPIT SFKDAITSAV ESNQVILISG ETGCGKTTQV PQYLLDHMWS SKRETCKIVC 241 TQPRRISAMS VSERISCERG ESIGENIGYK VRLQSKGGRH SSVVFCTNGI LLRVLVGKGS 301 VSSVSDITHI IVDEIHERDC YSDFMLAIIR DLLPSNPHLR LILMSATLDA ERFSGYFGGC 361 PVVRVPGFTY PVRTLYLEDV LSILKSGGDN HLSSTNLSIS DHKLDLTDED KLALDEAIIL 421 AWTNDEFDAL LDLVSSRGSH EIYNYQHQST WLTPLMVFAG KGRISDVCML LSFGADWSLK 481 SKDGMTALEL AEAENQLEAA QIIREHADNS QSNSQQGQQL LDKYMATINP EQVDVSLIQQ 541 LMRKICGDSE DGAILVFLPG WDDINKTRQR LLENPFFADS AKFDIICLHS MVPAGEQKKV 601 FNRPPPGCRK IVLATNIAES AVTIDDVVYV IDSGRMKEKS YDPYNNVSTL QSSWVSKANA 661 KQRQGRAGRC QPGICYHLYS RLRAASMPDF KVPEIKRMPV EELCLQVKIL DPNCKTNDFL 721 QKLLDPPVDQ SIANALSILQ DIGALTPQEE LTELGEKFGH LPVHPLISKM LFFAVLVNCL 781 DPALTLACAA DYKEPFTMPM SPVERQKAAA AKLELASLCG GDSDHLAVVA AFECWKNAKG 841 RGLSAEFCSQ YFVSPSAMKM LDQMRSQLES ELKRHGIIPN DISSCSQNSR DPGILRAVLA 901 VGLYPMVGRL CPAFGNNRRT IVETASGAKV RVHSLSNNFN LSSKKYDESL LVFDEITRGD 961 GGMHIRNCTV ARDLPLLLIS TEIAVAPTGS SDSDDSNEEE EDDEEVAANT NEEVAANTNE 1021 EGMDIHKEES RRGAKMMSSP ENSVKLVVDR WLPFRTTALE VAQMYILRER LMASILFKVT 1081 HPREHLPPHL GASMHAIAGI LSYDGHAGLS CPPESMVPKH SRTEMYDTGG WEEKPNSFLN 1141 SLFWSLSLKE NKHPSHTNRN QQHNYNMAPT EAASIPRQQN YKQRNPKATN NTDSGKKKEK 1201 MFVNPTNRIN QPEAASTGKP SKHKSANSSG SSNKKENMPS DQAYGNKQHN TVPREAAAPM 1261 AKNQSSKKTK TRSGNNSDSG KKKEQYIPKR QREDKAEQK //