LOCUS AEC08101.1 3543 aa PRT PLN 23-MAR-2023 DEFINITION Arabidopsis thaliana P-loop containing nucleoside triphosphate hydrolases superfamily protein protein. ACCESSION CP002685-3722 PROTEIN_ID AEC08101.1 SOURCE Arabidopsis thaliana (thale cress) ORGANISM Arabidopsis thaliana Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis. REFERENCE 1 (bases 1 to 19698289) AUTHORS Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D., Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V., Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L., Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L., Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H., Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D., Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and Venter,J.C. TITLE Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana JOURNAL Nature 402 (6763), 761-768 (1999) PUBMED 10617197 REFERENCE 2 (bases 1 to 19698289) AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E. CONSRTM TAIR TITLE Direct Submission JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie Institution, 260 Panama Street, Stanford, CA, USA REFERENCE 3 (bases 1 to 19698289) AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M., Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R., Vaughn,M. and Town,C.D. TITLE Direct Submission JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute, 9704 Medical Center Dr, Rockville, MD 20850, USA REMARK Protein update by submitter FEATURES Qualifiers source /organism="Arabidopsis thaliana" /mol_type="genomic DNA" /db_xref="taxon:3702" /chromosome="2" /ecotype="Columbia" protein /gene="SYD" /locus_tag="AT2G28290" /gene_synonym="CHR3" /gene_synonym="CHROMATIN REMODELING COMPLEX SUBUNIT R" /gene_synonym="CHROMATIN REMODELING COMPLEX SUBUNIT R 3" /gene_synonym="SPLAYED" /inference="Similar to RNA sequence, EST:INSD:EL147426.1,INSD:EL968414.1,INSD:DR368823.1, INSD:EG439171.1,INSD:ES161709.1,INSD:EL111235.1, INSD:ES064955.1,INSD:ES029089.1,INSD:AI994368.1, INSD:EL264691.1,INSD:W43230.1,INSD:ES069379.1, INSD:EG465049.1,INSD:AV547453.1,INSD:AV530561.1, INSD:ES008244.1,INSD:EL169424.1,INSD:ES060761.1, INSD:EG507493.1,INSD:AV528539.1,INSD:EH972675.1, INSD:ES207959.1,INSD:ES161710.1,INSD:ES104467.1, INSD:ES051543.1,INSD:DR363494.1,INSD:EH853216.1, INSD:ES022794.1,INSD:EL333098.1,INSD:EH812975.1, INSD:AV548063.1,INSD:AV547265.1,INSD:ES197586.1, INSD:EG507492.1,INSD:AV548722.1,INSD:EL024836.1, INSD:DR368822.1,INSD:EG478774.1,INSD:ES031279.1, INSD:ES009797.1,INSD:EG464998.1,INSD:EL112680.1, INSD:AV522977.1,INSD:ES214097.1,INSD:T21639.1, INSD:DR371156.1,INSD:EH988369.1,INSD:EL114767.1, INSD:EL118739.1,INSD:EG507491.1,INSD:ES128092.1, INSD:EL221016.1,INSD:EL315142.1,INSD:EG507494.1, INSD:EL180052.1,INSD:ES135051.1,INSD:EL991684.1, INSD:EL201700.1,INSD:ES008490.1" /inference="similar to RNA sequence, mRNA:INSD:AY927849.1,INSD:BX819747.1" /note="SPLAYED (SYD); CONTAINS InterPro DOMAIN/s: DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase/SANT-associated, DNA binding (InterPro:IPR014012), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), SNF2-related (InterPro:IPR000330); BEST Arabidopsis thaliana protein match is: Homeotic gene regulator (TAIR:AT3G06010.1); Has 38598 Blast hits to 29293 proteins in 2471 species: Archae - 323; Bacteria - 8462; Metazoa - 11641; Fungi - 6683; Plants - 2383; Viruses - 257; Other Eukaryotes - 8849 (source: NCBI BLink)." /db_xref="Araport:AT2G28290" /db_xref="TAIR:AT2G28290" intron_pos 37:0 (1/33) intron_pos 57:2 (2/33) intron_pos 96:1 (3/33) intron_pos 226:1 (4/33) intron_pos 245:0 (5/33) intron_pos 298:2 (6/33) intron_pos 320:1 (7/33) intron_pos 451:1 (8/33) intron_pos 504:0 (9/33) intron_pos 536:2 (10/33) intron_pos 598:2 (11/33) intron_pos 659:0 (12/33) intron_pos 723:0 (13/33) intron_pos 737:2 (14/33) intron_pos 756:2 (15/33) intron_pos 789:0 (16/33) intron_pos 846:2 (17/33) intron_pos 918:0 (18/33) intron_pos 960:0 (19/33) intron_pos 990:0 (20/33) intron_pos 1029:0 (21/33) intron_pos 1056:0 (22/33) intron_pos 1092:0 (23/33) intron_pos 1148:2 (24/33) intron_pos 1175:0 (25/33) intron_pos 1200:0 (26/33) intron_pos 1232:2 (27/33) intron_pos 1268:2 (28/33) intron_pos 1288:0 (29/33) intron_pos 1365:0 (30/33) intron_pos 1688:1 (31/33) intron_pos 1753:1 (32/33) intron_pos 3339:1 (33/33) BEGIN 1 MTSSSHNIEL EAAKFLHKLI QDSKDEPAKL ATKLYVILQH MKTSGKENTM PYQVISRAMD 61 TVVNQHGLDI EALKSSCLPH PGGTQTEDSG SAHLAGSSQA VGVSNEGKAT LVENEMTKYD 121 AFTSGRQLGG SNSASQTFYQ GSGTQSNRSF DRESPSNLDS TSGISQPHNR SETMNQRDVK 181 SSGKRKRGES SLSWDQNMDN SQIFDSHKID DQTGEVSKIE MPGNSGDIRN LHVGLSSDAF 241 TTPQCGWQSS EATAIRPAIH KEPGNNVAGE GFLPSGSPFR EQQLKQLRAQ CLVFLALRNG 301 LVPKKLHVEI ALRNTFREED GFRGELFDPK GRTHTSSDLG GIPDVSALLS RTDNPTGRLD 361 EMDFSSKETE RSRLGEKSFA NTVFSDGQKL LASRIPSSQA QTQVAVSHSQ LTFSPGLTKN 421 TPSEMVGWTG VIKTNDLSTS AVQLDEFHSS DEEEGNLQPS PKYTMSQKWI MGRQNKRLLV 481 DRSWSLKQQK ADQAIGSRFN ELKESVSLSD DISAKTKSVI ELKKLQLLNL QRRLRSEFVY 541 NFFKPIATDV EHLKSYKKHK HGRRIKQLEK YEQKMKEERQ RRIRERQKEF FGGLEVHKEK 601 LEDLFKVRRE RLKGFNRYAK EFHKRKERLH REKIDKIQRE KINLLKINDV EGYLRMVQDA 661 KSDRVKQLLK ETEKYLQKLG SKLKEAKLLT SRFENEADET RTSNATDDET LIENEDESDQ 721 AKHYLESNEK YYLMAHSIKE NINEQPSSLV GGKLREYQMN GLRWLVSLYN NHLNGILADE 781 MGLGKTVQVI SLICYLMETK NDRGPFLVVV PSSVLPGWQS EINFWAPSIH KIVYCGTPDE 841 RRKLFKEQIV HQKFNVLLTT YEYLMNKHDR PKLSKIHWHY IIIDEGHRIK NASCKLNADL 901 KHYVSSHRLL LTGTPLQNNL EELWALLNFL LPNIFNSSED FSQWFNKPFQ SNGESSAEEA 961 LLSEEENLLI INRLHQVLRP FVLRRLKHKV ENELPEKIER LIRCEASAYQ KLLMKRVEDN 1021 LGSIGNAKSR AVHNSVMELR NICNHPYLSQ LHSEEVNNII PKHFLPPIVR LCGKLEMLDR 1081 MLPKLKATDH RVLFFSTMTR LLDVMEDYLT LKGYKYLRLD GQTSGGDRGA LIDGFNKSGS 1141 PFFIFLLSIR AGGVGVNLQA ADTVILFDTD WNPQVDLQAQ ARAHRIGQKK DVLVLRFETV 1201 NSVEEQVRAS AEHKLGVANQ SITAGFFDNN TSAEDRKEYL ESLLRESKKE EDAPVLDDDA 1261 LNDLIARRES EIDIFESIDK QRKENEMETW NTLVHGPGSD SFAHIPSIPS RLVTEDDLKL 1321 LYETMKLNDV PMVAKESTVG MKRKDGSMGG LDTHQYGRGK RAREVRSYEE KLTEEEFEKL 1381 CQTESPDSPQ GKGEGSERSL ANDTSNIPVE NSSDTLLPTS PTQAITVQPM EPVRPQSHTL 1441 KEETQPIKRG RGRPKRTDKA LTPVSLSAVS RTQATGNAIS SAATGLDFVS SDKRLEAASH 1501 PTSSLALTSP DLSGPPGFQS LPASPAPTPI RGRGRGRSRG RGAGRGRRVE GVLHGSNSSI 1561 TQRTETATSL ASDAEATKFA LPRSASEIVS RVPKANEGST SNPDQVSPVH SATTALRSDK 1621 AADKDLDAPP GFDSGSHVQT LNVLENSSER KAFAVKKRPL IQGVSSQHPG PNKQPLDLPV 1681 STSSTLLGGG PVQNQNAVSS VCDGSKSPSE GRTYTALQGV TTAPSDATLP MSSQPSDATL 1741 PMSSQPVGST VEAQEANVPS LPAALPAKRR VRNLPSRGET PKRQGKRRGQ PLPATDASSA 1801 RSTGLTPQIE VKVGNLSGTK AKFDAVAKEQ PHFSQSVAPD IHSSGSLSQE IRRDTSGTGG 1861 SARKQTADVT DVARVMKEIF SETSLLKHKV GEPSATTRTN VPDAQSPGEM NLHTVETHKA 1921 EDSSGLKNQE ALYNLSKADK LVSDIPHPVP GDLTTSGSVA NKDVDIGSSK VAAENELVKI 1981 PGGDVDSSVI QLSLGNTLTA KSSLEKCTAD QLLGEKLSQE GETTPASDGE TCHLAEETAS 2041 SLSYVRSEPT ASASTTAEPL PTDKLEKNIS FQDEVKTLNG DKREAILLSS EEQTNVNSKI 2101 ETNSEELQAS RTDEVPHVDG KSVDVANQTV KEDEAKHSVE IQSSMLEPDE LPNAGQKGHS 2161 SIDLQPLVLV TSNENAMSLD DKDYDPISKS ADIEQDPEES VFVQGVGRPK VGTADTQMED 2221 TNDAKLLVGC SVESEEKEKT LQSLIPGDDA DTEQDPEESV SDQRPKVGSA YTQMEDTDEA 2281 KLLMGCSVES EEKEKTLQSH IPGDDADTEK NPEESVSVQG VDRPKVGTTD TQMEDTNDAK 2341 LLVGCSVASE EKEKTLQSHI PGDDADTEQN PEESVSVQGV NRPKVGNANT QMEDTDEAKV 2401 LVGCSVESEE KEKTLQSHIP GDDADTEQNP EESVSNFDRP KDGTADTHME DIDDAKLLVG 2461 CSVESEEKEK SLQSHMPSDD AVLHAPFENT KDSKGDDLHG ESLVSCPTME VMEQKGFESE 2521 THARTDSGGI DRGNEVSENM SDGVKMNISS VQVPDASHDL NVSQDQTDIP LVGGIDPEHV 2581 QENVDVPASP HGAAPNIVIF QSEGHLSPSI LPDDVAGQLE SMSNDEKTNI SSEQVPDVSH 2641 DLKVSQDQTD IPPVGGIVPE NLQEIVDVPA SPHGVVPDVV VSQSEEIQSP SILPDDVPGQ 2701 PDDGNCEKMD TMQNNTSIDI GITSGKTCQP SSSTQPEDEN RNSLSHCEPS EVVEQRDSRD 2761 QVCIGSVESQ VEISSAILEN RSADIQPPQS ILVDQKDIEE SKEPGIESAD VSLHQLADIQ 2821 AEPSNLVDQM DIEESKEPGT ESADVSLHQL ADIQPGPSIL VDQMDTEKSK EPGTESADVS 2881 LHQLADIQPG PSILVDQMDT EKSKEPGTES ADVSLHQLAD IQPGPSILVD QMDTEEFKNP 2941 DVSLHQLADI EPSLSISAVQ KNIEDKDQSH VETAGSELVD VSAECSTEPQ VQLPPSSEPV 3001 GDMHVHLGAS KSEIVAEGTD FSSSLPKTEE ENAKSQLADT EPSSSLTAVQ KNIEDQVETA 3061 GCEFVVVSTG CSTEPQVQLP PSAEPVVAEG TEFPSSLLMT GVDNSSHLMT GVDNAKTHLA 3121 DVVPSSSPTT MEKNIEAQDQ DQVTTGGCGL VDVLTECSSE PQLQLPPSAE PVISEGTELA 3181 TLPLTEEENA DSQLANIEPS SSPSVVEKNI EAQDQDQVKT AGCELVSTGC SSEPQVHLPP 3241 SAEPDGDIHV HLKETEKSES MVVVGEGTAF PSSLPVTEEG NAESQLADTE PFTSPTVVEK 3301 NIKDQEQVET TGCGLVDDST GCSSEPQVQL PPSAEPMEVV QTNIEDQDQI ETGGCDLINV 3361 PSGCSTEPQI QLSSSAEPEE GMHIHLEAAM NSETVVTEGS ELPSSLPMTE DENADGQLAE 3421 VEPSVSLTVE QTNIEEKDHI ETAECELVDV SPGCSSQPEV KFPPSPDAVG GMDVHLETVV 3481 TEDTDSNSSL PKTEEKDAEN PSDRLDGESD GTTVATVEGT CVESNSLVAE ESNIEVPKDN 3541 EDV //