LOCUS AEC07531.1 993 aa PRT PLN 23-MAR-2023 DEFINITION Arabidopsis thaliana DNA/RNA polymerases superfamily protein protein. ACCESSION CP002685-2933 PROTEIN_ID AEC07531.1 SOURCE Arabidopsis thaliana (thale cress) ORGANISM Arabidopsis thaliana Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis. REFERENCE 1 (bases 1 to 19698289) AUTHORS Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D., Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V., Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L., Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L., Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H., Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D., Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and Venter,J.C. TITLE Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana JOURNAL Nature 402 (6763), 761-768 (1999) PUBMED 10617197 REFERENCE 2 (bases 1 to 19698289) AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E. CONSRTM TAIR TITLE Direct Submission JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie Institution, 260 Panama Street, Stanford, CA, USA REFERENCE 3 (bases 1 to 19698289) AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M., Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R., Vaughn,M. and Town,C.D. TITLE Direct Submission JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute, 9704 Medical Center Dr, Rockville, MD 20850, USA REMARK Protein update by submitter FEATURES Qualifiers source /organism="Arabidopsis thaliana" /mol_type="genomic DNA" /db_xref="taxon:3702" /chromosome="2" /ecotype="Columbia" protein /gene="SCA3" /locus_tag="AT2G24120" /gene_synonym="F27D4.3" /gene_synonym="F27D4_3" /gene_synonym="PDE319" /gene_synonym="PIGMENT DEFECTIVE 319" /gene_synonym="SCABRA 3" /inference="Similar to RNA sequence, EST:INSD:ES068989.1,INSD:ES000932.1,INSD:EH842471.1, INSD:EL998994.1,INSD:BP651558.1,INSD:BP656074.1, INSD:BP812585.1,INSD:AV822903.1,INSD:AV546957.1, INSD:BP654217.1,INSD:EL228027.1,INSD:ES058892.1, INSD:EH935884.1,INSD:AV783772.1,INSD:AV528671.1, INSD:AU230672.1,INSD:CF772943.1,INSD:EL279344.1, INSD:N96123.1,INSD:BP842028.1,INSD:AU239373.1, INSD:AW004269.1,INSD:BP655001.1,INSD:EG486354.1, INSD:BP647611.1" /inference="similar to RNA sequence, mRNA:INSD:AK229652.1,INSD:AK226316.1,INSD:Y08463.1" /note="SCABRA 3 (SCA3); FUNCTIONS IN: DNA-directed RNA polymerase activity, protein binding, DNA binding; INVOLVED IN: transcription; LOCATED IN: mitochondrion; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA-directed RNA polymerase, bacteriophage type (InterPro:IPR002092); BEST Arabidopsis thaliana protein match is: male gametophyte defective 3 (TAIR:AT1G68990.1); Has 1315 Blast hits to 1296 proteins in 334 species: Archae - 0; Bacteria - 38; Metazoa - 134; Fungi - 224; Plants - 204; Viruses - 139; Other Eukaryotes - 576 (source: NCBI BLink)." /db_xref="Araport:AT2G24120" /db_xref="TAIR:AT2G24120" intron_pos 283:0 (1/18) intron_pos 346:0 (2/18) intron_pos 390:2 (3/18) intron_pos 414:0 (4/18) intron_pos 433:2 (5/18) intron_pos 473:0 (6/18) intron_pos 511:0 (7/18) intron_pos 555:0 (8/18) intron_pos 694:0 (9/18) intron_pos 711:0 (10/18) intron_pos 734:2 (11/18) intron_pos 763:0 (12/18) intron_pos 814:0 (13/18) intron_pos 839:0 (14/18) intron_pos 869:0 (15/18) intron_pos 885:0 (16/18) intron_pos 923:1 (17/18) intron_pos 958:0 (18/18) BEGIN 1 MASAAAASPS LSLNPTSHFQ HQTSLVTWLK PPPSSALFRR KTLPFFERHS LPISASSSSS 61 SSSSTSLSVH EKPISNSVHF HGNLIESFEN QDSSYAGTIK GASLIEELEN PVERNGLSGR 121 RRLFMQDPPW ISALFLKGLS KMVDQTLKIE RKDIDKRKFD SLRRRQVKEE TEAWERMVDE 181 YRDLEKEMCE KNLAPNLPYV KHMFLGWFQP LKDVIEREQK LQKNKSKKVR AAYAPHIELL 241 PADKMAVIVM HKMMGLVMSG HEDGCIQVVQ AAVSIGIAIE QEVRIHNFLK RTRKNNAGDS 301 QEELKEKQLL RKRVNSLIRR KRIIDALKVV KSEGTKPWGR ATQAKLGSRL LELLIEAAYV 361 QPPLTQSGDS IPEFRPAFRH RFKTVTKYPG SKLVRRYGVI ECDSLLLAGL DKSAKHMLIP 421 YVPMLVPPKR WKGYDKGGYL FLPSYIMRTH GSKKQQDALK DISHKTAHRV FEALDTLGNT 481 KWRVNRNILD VVERLWADGG NIAGLVNRED VPIPEKPSSE DPEELQSWKW SARKANKINR 541 ERHSLRCDVE LKLSVARKMK DEEGFYYPHN LDFRGRAYPM HPHLNHLSSD LCRGTLEFAE 601 GRPLGKSGLH WLKIHLANLY AGGVEKLSHD ARLAFVENHL DDIMDSAENP IHGKRWWLKA 661 EDPFQCLAAC VILTQALKSP SPYSVISHLP IHQDGSCNGL QHYAALGRDS FEAAAVNLVA 721 GEKPADVYSE ISRRVHEIMK KDSSKDPESN PTAALAKILI TQVDRKLVKQ TVMTSVYGVT 781 YVGAREQIKR RLEEKGVITD ERMLFAAACY SAKVTLAALG EIFEAARAIM SWLGDCAKII 841 ASDNHPVRWI TPLGLPVVQP YCRSERHLIR TSLQVLALQR EGNTVDVRKQ RTAFPPNFVH 901 SLDGTHMMMT AVACREAGLN FAGVHDSYWT HACDVDTMNR ILREKFVELY NTPILEDLLQ 961 SFQESYPNLV FPPVPKRGDF DLKEVLKSQY FFN //