LOCUS       AEC07500.1               477 aa    PRT              PLN 23-MAR-2023
DEFINITION  Arabidopsis thaliana Pectin lyase-like superfamily protein protein.
ACCESSION   CP002685-2858
PROTEIN_ID  AEC07500.1
SOURCE      Arabidopsis thaliana (thale cress)
  ORGANISM  Arabidopsis thaliana
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
            Camelineae; Arabidopsis.
REFERENCE   1  (bases 1 to 19698289)
  AUTHORS   Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
            Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
            Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
            Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
            Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
            Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
            Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
            Venter,J.C.
  TITLE     Sequence and analysis of chromosome 2 of the plant Arabidopsis
            thaliana
  JOURNAL   Nature 402 (6763), 761-768 (1999)
   PUBMED   10617197
REFERENCE   2  (bases 1 to 19698289)
  AUTHORS   Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
  CONSRTM   TAIR
  TITLE     Direct Submission
  JOURNAL   Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
            Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE   3  (bases 1 to 19698289)
  AUTHORS   Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
            Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
            Vaughn,M. and Town,C.D.
  TITLE     Direct Submission
  JOURNAL   Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
            9704 Medical Center Dr, Rockville, MD 20850, USA
  REMARK    Protein update by submitter
FEATURES             Qualifiers
     source          /organism="Arabidopsis thaliana"
                     /mol_type="genomic DNA"
                     /db_xref="taxon:3702"
                     /chromosome="2"
                     /ecotype="Columbia"
     protein         /locus_tag="AT2G23900"
                     /gene_synonym="T29E15.10"
                     /gene_synonym="T29E15_10"
                     /inference="Similar to RNA sequence,
                     EST:INSD:EG500452.1,INSD:EG502181.1,INSD:DR263355.1,
                     INSD:EG502180.1,INSD:DR263354.1,INSD:EG500456.1,
                     INSD:EG500457.1,INSD:EG500458.1,INSD:EG500455.1,
                     INSD:EG502183.1,INSD:EG502182.1,INSD:EG500453.1,
                     INSD:DR263353.1"
                     /inference="similar to RNA sequence,
                     mRNA:INSD:DQ446556.1,INSD:DQ653019.1"
                     /note="Pectin lyase-like superfamily protein; FUNCTIONS
                     IN: polygalacturonase activity; INVOLVED IN: carbohydrate
                     metabolic process; LOCATED IN: endomembrane system;
                     EXPRESSED IN: 9 plant structures; EXPRESSED DURING: L
                     mature pollen stage, M germinated pollen stage, 4
                     anthesis, C globular stage, petal differentiation and
                     expansion stage; CONTAINS InterPro DOMAIN/s: Pectin lyase
                     fold/virulence factor (InterPro:IPR011050), Glycoside
                     hydrolase, family 28 (InterPro:IPR000743), Pectin lyase
                     fold (InterPro:IPR012334), Parallel beta-helix repeat
                     (InterPro:IPR006626); BEST Arabidopsis thaliana protein
                     match is: Pectin lyase-like superfamily protein
                     (TAIR:AT3G48950.1); Has 35333 Blast hits to 34131 proteins
                     in 2444 species: Archae - 798; Bacteria - 22429; Metazoa -
                     974; Fungi - 991; Plants - 531; Viruses - 0; Other
                     Eukaryotes - 9610 (source: NCBI BLink)."
                     /db_xref="Araport:AT2G23900"
                     /db_xref="TAIR:AT2G23900"
     intron_pos      12:0 (1/4)
     intron_pos      126:0 (2/4)
     intron_pos      166:1 (3/4)
     intron_pos      249:1 (4/4)
BEGIN
        1 MEFSINPSTL KMIRTSFCIL VVLAISSFSM MEARDLASKG KTNIEYMALN CRKHTAVLTE
       61 FGAVGDGKTS NTKAFKEAIT KLAPKAADGG VQLIVPPGKW LTGSFNLTSH FTLFIQKGAT
      121 ILASQDESEY PVVAPLPSYG QGRDAAGPTF ASLISGTNLT DVVITGNNGT INGQGKYWWV
      181 KYRSGGFKGI TRPYTIEIIF SQNVQISNIT IIDSPAWNIH PVYCNNVIVK GVTILAPIDS
      241 PNTDGINPDS CTNTLIEDCY VVSGDDCIAV KSGWDQFGIK VGMPTQQLSI RRLTCISPDS
      301 AGIALGSEMS GGIKDVRIED ITLLQTQSAI RIKTAVGRGG YVKDIFARRF TMKTMKYVFW
      361 MSGAYNQHPA SGFDPKAMPV ITNINYRDMT ADNVTQPARL DGFKNDPFTK ICMSNIKIDL
      421 AAEPKKLLWN CTSISGVSSK VTPKPCSLLP EKGAPVDCAF PVDKIPIESV VLNKCSA
//