LOCUS       AEC07178.1              1003 aa    PRT              PLN 23-MAR-2023
DEFINITION  Arabidopsis thaliana RNA-binding (RRM/RBD/RNP motifs)
            family protein protein.
ACCESSION   CP002685-2434
PROTEIN_ID  AEC07178.1
SOURCE      Arabidopsis thaliana (thale cress)
  ORGANISM  Arabidopsis thaliana
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
            Camelineae; Arabidopsis.
REFERENCE   1  (bases 1 to 19698289)
  AUTHORS   Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
            Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
            Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
            Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
            Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
            Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
            Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
            Venter,J.C.
  TITLE     Sequence and analysis of chromosome 2 of the plant Arabidopsis
            thaliana
  JOURNAL   Nature 402 (6763), 761-768 (1999)
   PUBMED   10617197
REFERENCE   2  (bases 1 to 19698289)
  AUTHORS   Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
  CONSRTM   TAIR
  TITLE     Direct Submission
  JOURNAL   Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
            Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE   3  (bases 1 to 19698289)
  AUTHORS   Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
            Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
            Vaughn,M. and Town,C.D.
  TITLE     Direct Submission
  JOURNAL   Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
            9704 Medical Center Dr, Rockville, MD 20850, USA
  REMARK    Protein update by submitter
FEATURES             Qualifiers
     source          /organism="Arabidopsis thaliana"
                     /mol_type="genomic DNA"
                     /db_xref="taxon:3702"
                     /chromosome="2"
                     /ecotype="Columbia"
     protein         /locus_tag="AT2G21440"
                     /gene_synonym="F3K23.20"
                     /gene_synonym="F3K23_20"
                     /inference="Similar to RNA sequence,
                     EST:INSD:EL170214.1,INSD:ES123338.1,INSD:EH826698.1,
                     INSD:EL306236.1,INSD:EG482633.1,INSD:BP786966.1,
                     INSD:ES146930.1,INSD:EL331977.1,INSD:BP641931.1,
                     INSD:AV559782.1,INSD:EH958669.1,INSD:EL256679.1,
                     INSD:BP791008.1,INSD:AV825276.1,INSD:EG482632.1,
                     INSD:AV790838.1,INSD:BP789556.1,INSD:BP781994.1,
                     INSD:ES075962.1,INSD:EL083347.1"
                     /inference="similar to RNA sequence,
                     mRNA:INSD:AY059760.1,INSD:BT003003.1"
                     /note="RNA-binding (RRM/RBD/RNP motifs) family protein;
                     FUNCTIONS IN: RNA binding, nucleotide binding, nucleic
                     acid binding; EXPRESSED IN: 22 plant structures; EXPRESSED
                     DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA
                     recognition motif, RNP-1 (InterPro:IPR000504),
                     Nucleotide-binding, alpha-beta plait (InterPro:IPR012677);
                     BEST Arabidopsis thaliana protein match is: SC35-like
                     splicing factor 28 (TAIR:AT5G18810.1); Has 993074 Blast
                     hits to 495169 proteins in 22089 species: Archae - 21796;
                     Bacteria - 609929; Metazoa - 180707; Fungi - 26716; Plants
                     - 57391; Viruses - 71662; Other Eukaryotes - 24873
                     (source: NCBI BLink)."
                     /db_xref="Araport:AT2G21440"
                     /db_xref="TAIR:AT2G21440"
     intron_pos      36:0 (1/17)
     intron_pos      56:1 (2/17)
     intron_pos      68:2 (3/17)
     intron_pos      112:1 (4/17)
     intron_pos      136:1 (5/17)
     intron_pos      233:2 (6/17)
     intron_pos      278:1 (7/17)
     intron_pos      325:0 (8/17)
     intron_pos      342:0 (9/17)
     intron_pos      369:2 (10/17)
     intron_pos      388:0 (11/17)
     intron_pos      426:1 (12/17)
     intron_pos      599:2 (13/17)
     intron_pos      671:0 (14/17)
     intron_pos      694:2 (15/17)
     intron_pos      751:0 (16/17)
     intron_pos      794:1 (17/17)
BEGIN
        1 MGKNKRERKD GEEKSPHAAA TVCVSGLPYS ITNAQLEEAF SEVGPVRRCF LVTNKGSDEH
       61 RGFAFVKFAL QEDVNRAIEL KNGSTVGGRR ITVKQAAHRP SLQERRTKAA EGISVPDNSQ
      121 GQSDKDTSIP ETDEKVSPPE KKLEKPVERK KVEKPIERKQ VEKPVERKKA EKPIELKQVE
      181 KPFERKQVEK PVERKQVEKP VERKQVEKPI ERKRPTKLHV DLPDKETCSD KQRVARTVIF
      241 GGLANAEMAE VVHSRVKEIG TVCSVRYPLP KEELQQNGLT QDGCRAEASA VLFTSVKSAC
      301 AAVAKLHQTE VKGNLIWARQ LGGEGSKAQK WKLIIRNLPF QAKPSDIKVV FSAVGFVWDV
      361 FIPKNFETGL PKGFAFVKFT CKKDAANAIK KFNGHMFGKR PIAVDWAVPK NIYNGAADAT
      421 TASADGDKEG SDGDSENSSV DLEEVDEAVE SHPPPGDDTD DDEDGSNKLT ESDALDKDVG
      481 TDMNFEDEAD VARKVLKNLL ASSKGSTATP EGETEESDKS KLKSSSTKPV ADSSGVSEPL
      541 KSGKTKVVAP KETQDNDDFE RTLFIRNLPF DVTKEEVKQR FTVFGEVESL SLVLHKVTKR
      601 PEGTAFVKFK TADASVAAIS AADTASGVGV LLKGRQLNVM RAVGKKAAKD IELKKTEEKN
      661 VDHRNLYLAK EGQILDDTPA AEGVSAEDMD KRRRLHENKM KMLQSPNFHV SRTRLVIYNL
      721 PKSMNPKQLN RLLVDAVTSR ATKQKPCIRQ IKFLQNEKKG KVDTKNYSRG VAFVEFTEHE
      781 HALVALRVLN NNPETFGPQH RPVIEFAVDN VQKLKIREAK QQQFQQREKH NESDQQQANG
      841 EAQAPDNKYK RKTREGDNTG PRKENAARFK KGPREESKEE AKSNIAVKDN AAEKKRPIRT
      901 QEKPSSNKKG QLMRQKETTE KPDPKISKDL SEPRKRKFGE DRGEENRNGQ RKRKKQGQGQ
      961 GGAEVVDKLD LLIEKYRSKF SQSSAKTGPQ KQSSGQVRRW FES
//