LOCUS       AEC06978.1               407 aa    PRT              PLN 23-MAR-2023
DEFINITION  Arabidopsis thaliana phytochrome interacting factor 3-
            like 5 protein.
ACCESSION   CP002685-2156
PROTEIN_ID  AEC06978.1
SOURCE      Arabidopsis thaliana (thale cress)
  ORGANISM  Arabidopsis thaliana
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
            Camelineae; Arabidopsis.
REFERENCE   1  (bases 1 to 19698289)
  AUTHORS   Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
            Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
            Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
            Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
            Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
            Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
            Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
            Venter,J.C.
  TITLE     Sequence and analysis of chromosome 2 of the plant Arabidopsis
            thaliana
  JOURNAL   Nature 402 (6763), 761-768 (1999)
   PUBMED   10617197
REFERENCE   2  (bases 1 to 19698289)
  AUTHORS   Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
  CONSRTM   TAIR
  TITLE     Direct Submission
  JOURNAL   Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
            Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE   3  (bases 1 to 19698289)
  AUTHORS   Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
            Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
            Vaughn,M. and Town,C.D.
  TITLE     Direct Submission
  JOURNAL   Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
            9704 Medical Center Dr, Rockville, MD 20850, USA
  REMARK    Protein update by submitter
FEATURES             Qualifiers
     source          /organism="Arabidopsis thaliana"
                     /mol_type="genomic DNA"
                     /db_xref="taxon:3702"
                     /chromosome="2"
                     /ecotype="Columbia"
     protein         /gene="PIL5"
                     /locus_tag="AT2G20180"
                     /gene_synonym="PHY-INTERACTING FACTOR 1"
                     /gene_synonym="phytochrome interacting factor 3-like 5"
                     /gene_synonym="PIF1"
                     /gene_synonym="T2G17.2"
                     /gene_synonym="T2G17_2"
                     /inference="Similar to RNA sequence,
                     EST:INSD:AV821071.1,INSD:AU237330.1,INSD:DR749610.1,
                     INSD:AI999336.1,INSD:EL122370.1,INSD:AV796599.1,
                     INSD:EL131655.1,INSD:EL256111.1,INSD:EH859262.1,
                     INSD:EH952070.1,INSD:EH914218.1,INSD:ES024913.1,
                     INSD:BP633044.1,INSD:AU228370.1,INSD:EL072744.1,
                     INSD:AV820797.1,INSD:EH817544.1,INSD:EL317062.1,
                     INSD:EL322407.1"
                     /inference="similar to RNA sequence,
                     mRNA:INSD:BX820799.1,INSD:AK228820.1,INSD:BT029775.1"
                     /note="phytochrome interacting factor 3-like 5 (PIL5);
                     CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding
                     domain (InterPro:IPR001092), Helix-loop-helix DNA-binding
                     (InterPro:IPR011598); BEST Arabidopsis thaliana protein
                     match is: basic helix-loop-helix (bHLH) DNA-binding
                     superfamily protein (TAIR:AT4G28800.1); Has 4635 Blast
                     hits to 4615 proteins in 348 species: Archae - 0; Bacteria
                     - 26; Metazoa - 878; Fungi - 251; Plants - 3376; Viruses -
                     2; Other Eukaryotes - 102 (source: NCBI BLink)."
                     /db_xref="Araport:AT2G20180"
                     /db_xref="TAIR:AT2G20180"
     intron_pos      198:0 (1/5)
     intron_pos      224:0 (2/5)
     intron_pos      246:0 (3/5)
     intron_pos      268:0 (4/5)
     intron_pos      381:0 (5/5)
BEGIN
        1 MDPQQQPSSD QNLFIQEDEM TSWLHYPLRD DDFCSDLLFS AAPTATATAT VSQVTAARPP
       61 VSSTNESRPP VRNFMNFSRL RGDFNNGRGG ESGPLLSKAV VRESTQVSPS ATPSAAASES
      121 GLTRRTDGTD SSAVAGGGAY NRKGKAVAMT APAIEITGTS SSVVSKSEIE PEKTNVDDRK
      181 RKEREATTTD ETESRSEETK QARVSTTSTK RSRAAEVHNL SERKRRDRIN ERMKALQELI
      241 PRCNKSDKAS MLDEAIEYMK SLQLQIQMMS MGCGMMPMMY PGMQQYMPHM AMGMGMNQPI
      301 PPPSFMPFPN MLAAQRPLPT QTHMAGSGPQ YPVHASDPSR VFVPNQQYDP TSGQPQYPAG
      361 YTDPYQQFRG LHPTQPPQFQ NQATSYPSSS RVSSSKESED HGNHTTG
//